Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre02g0981 ATGGCTTTGCACTCAAATAAACTCAGAACCCAACGCCTCCATAACTCTCTCTTCTTCTTCGACTTCTTCCACTGCCCTGAACAACAACACCTTCAAACAGAGCATCCCATTTTCCTCAACAATGGCGGCACCAACAACTTCCCCTTTTTCCAAGAAACAACCCATTTCCATATTTACGAAGACGAGGAGCTCAATCATTTGTTGTCCAAAGAAAAAGACCAGAATCTCCAAGCCGGCGCCGTTTTGAAAACCTTGGTTCAAACAGATAATGCTTTGTCTCTCGCTAGAACAGAGGCCATCGACTGGTTGCTTAAAGTTAATGCCTTTTATGGCTTCTCCTCTCTCACAGCTCTCTTAGCAATTAATTACCTCGATAGAATCCTCTCTGGCCCCCATTTTCAAAGAGATAAGCCATGGATGCTTCAGCTTCTTGCTGTAACTTGCATCTCTTTAGCTGCTAAAGTCGAAGAAATTCGTGTCCCTCTTCTTCTAGATCTCCAGGTGGAAGATTCAAAGTACATTTTTGAAGCGAAAACGATACAGAGAATGGAGCTTTTGGTGCTTACTGCTCTGCAATGGAAGATGCATCCAGTGACCCCTGTTTCGTTTCTTGGCATTATCACAAAAGGGCTTGGAATGAAGAATCAGTACATTCAAAGAGAGTTTCTTAGACGTTGTGAGCGTCTTCTCCTCTCTCTCGTCTCTGATTCGAGGTCGGTGGGGATTCTTCCTTCTGTAATGGCGGTATCAGCAATGGTGAGCGTTGTTGAAGAGATGGGAAGCTGTAACCCATTGGAGGAGTTTCAGGATCAGCTTCTTAATGCCCTCAAAATAAATAAGGGGAGAGTGAAGGAGTGTTGTAAAGTGATAATGGAGGCAAAAGCCAAAGGATCAGGGAAAAGGAAGCATGTGGAGGAGGAAGCAGAATCAGAAGCAGAAGCAGAAGCAGAATCATCAGAAGCAGAAGCAGAGGAAGAAGCAGAAGCAGGGAGTCCAAATGGAGTAATGGAGGCTAATTTCAGCTGTGAAAGCTCCAATGATTCGTGGGAAATGGGGTCGATTGTGTCAGAGTACACACATTTTTCTCCTTCTTCTTCTTCTTCTTCCAAAAGAATCAGACCCACTCGATGA 1131 44.3 MALHSNKLRTQRLHNSLFFFDFFHCPEQQHLQTEHPIFLNNGGTNNFPFFQETTHFHIYEDEELNHLLSKEKDQNLQAGAVLKTLVQTDNALSLARTEAIDWLLKVNAFYGFSSLTALLAINYLDRILSGPHFQRDKPWMLQLLAVTCISLAAKVEEIRVPLLLDLQVEDSKYIFEAKTIQRMELLVLTALQWKMHPVTPVSFLGIITKGLGMKNQYIQREFLRRCERLLLSLVSDSRSVGILPSVMAVSAMVSVVEEMGSCNPLEEFQDQLLNALKINKGRVKECCKVIMEAKAKGSGKRKHVEEEAESEAEAEAESSEAEAEEEAEAGSPNGVMEANFSCESSNDSWEMGSIVSEYTHFSPSSSSSSKRIRPTR 376
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 7216459 7218837 + CrPI670011_02g009810.1 Cre02g0981 490262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre02g0981 376 CDD CYCLIN_AtCycD-like_rpt2 198 290 - -
Cre02g0981 376 MobiDBLite consensus disorder prediction 298 347 - -
Cre02g0981 376 Pfam Cyclin, N-terminal domain 67 195 IPR006671 -
Cre02g0981 376 Gene3D - 77 196 - -
Cre02g0981 376 PANTHER CYCLINS 59 260 IPR039361 GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER)
Cre02g0981 376 MobiDBLite consensus disorder prediction 310 327 - -
Cre02g0981 376 SUPERFAMILY Cyclin-like 53 196 IPR036915 -
Cre02g0981 376 CDD CYCLIN_AtCycD-like_rpt1 95 193 - -
Cre02g0981 376 FunFam D6-type cyclin 79 196 - -
Cre02g0981 376 Gene3D - 65 288 - -
Cre02g0981 376 SMART cyclin_7 101 189 IPR013763 -
Cre02g0981 376 SMART Cyclin_C_2 198 322 IPR004367 -
Cre02g0981 376 ProSitePatterns Cyclins signature. 96 127 IPR048258 -
Cre02g0981 376 Coils Coil 302 329 - -
Cre02g0981 376 Pfam Cyclin, C-terminal domain 198 315 IPR004367 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g0981 Cre-Chr2:7216459 Cre04g1465 Cre-Chr4:33446872 3.10E-36 dispersed
Cre02g0981 Cre-Chr2:7216459 Cre04g1332 Cre-Chr4:32140629 9.30E-57 wgd
Cre02g0981 Cre-Chr2:7216459 Cre05g1199 Cre-Chr5:11627247 6.20E-69 wgd
Cre02g0981 Cre-Chr2:7216459 Cre05g2211 Cre-Chr5:33809489 8.40E-58 wgd
Cre02g0981 Cre-Chr2:7216459 Cre08g1559 Cre-Chr8:28237832 7.60E-67 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre02g0981 K14505 - csv:101222066 553.132