Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre02g1020 ATGATGTTGAGGTCGTGTTGCCGGCCGCTCGAGCGGTTCATTGGCCGGTGGAGCGGCGATGGACTGCTCTGGCAGTCGGAATTGAAGCCTCATGCCTCTGGTGATTACTCAATCGCTGTTGTTCAGGCTAATTCTTGTCTTGAGGATCAGAGTCAGGTCTTCACGTCTCCTTCTGCTACTTATGTTGGTGTTTATGATGGCCATGGCGGTCCGGAGGCTTCTCGCTTCGTGAATAAGCATCTTTTTCCTTATATGCATAAGTTTGCTTCAGAACAAGGTGGACTATCGGAGGATGTTATTAAGAAGGCATTCAATGCTACAGAAGAGGAGTTTACGCGTTTGGTTAAGCGGGCTTTGCCTGCAAAGCCACAGATTGCTTCAGTTGGATCATGCTGTCTTGTAGGTGCAATTTCAAATACAAAGTTATACATTGCGAATCTCGGTGATTCGAGAGCTGTGCTTGGTCGTAGAGGTTCAGAGAGTAAGATAACACCAGTAGTTGCAGAACGGTTGTCCACCGATCACAATGTTGGAGTAGATGAAGTTAGGAAAGAGGTTGTAGCACTTCATCCTGATGATTCCCATATAGTTGTCTATACTCGTGGAGTTTGGAGGATAAAAGGCATAATTCAGGTTTCAAGATCTATTGGCGATGTATATTTAAAGAAACCCGAGTTCAACCGGGATCCAATATTCCAACAATTTGGGAACCCCGTTCCTTTGAAACAACCAGTAATGACTGCAGAGCCATCGATCCTGACACGAGAGCTCAAACCCCAAGATTTATTCCTCATCTTTGCATCAGATGGTCTCTGGGAACAACTGACTGATGAAGCTGCGGTGGAGATAGTTTTCAAGAACCCAAGAGCTGGAATTGCAAAGAGATTAGTGCGTGCTGCCCTCCACGAGGCAGCAAAGAAGCGCGAAATGAGATACTCCGACTTAAAGAAGATTGAAAAGGGGATTCGCCGTCATTTCCACGACGACATCACTGTCATCGTCGTTTATCTCGACCACAATAGAAGCTCACACTCCAATCGAGCAAAGAACACGGTTGCCGGGTACACTAGTGCACCTGTTGACATTTTCTCTCTTAAATCAAACTATGAAGAAGAGGAAAAACTTCACACAATGTTGTGA 1140 45.61 MMLRSCCRPLERFIGRWSGDGLLWQSELKPHASGDYSIAVVQANSCLEDQSQVFTSPSATYVGVYDGHGGPEASRFVNKHLFPYMHKFASEQGGLSEDVIKKAFNATEEEFTRLVKRALPAKPQIASVGSCCLVGAISNTKLYIANLGDSRAVLGRRGSESKITPVVAERLSTDHNVGVDEVRKEVVALHPDDSHIVVYTRGVWRIKGIIQVSRSIGDVYLKKPEFNRDPIFQQFGNPVPLKQPVMTAEPSILTRELKPQDLFLIFASDGLWEQLTDEAAVEIVFKNPRAGIAKRLVRAALHEAAKKREMRYSDLKKIEKGIRRHFHDDITVIVVYLDHNRSSHSNRAKNTVAGYTSAPVDIFSLKSNYEEEEKLHTML 379
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 7854427 7856531 - CrPI670011_02g010200.1 Cre02g1020 490301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre02g1020 379 ProSitePatterns PPM-type phosphatase domain signature. 61 69 IPR000222 GO:0043169(InterPro)
Cre02g1020 379 Gene3D - 25 349 IPR036457 -
Cre02g1020 379 SMART PP2C_4 25 335 IPR001932 -
Cre02g1020 379 PANTHER PROTEIN PHOSPHATASE 29 336 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cre02g1020 379 ProSiteProfiles PPM-type phosphatase domain profile. 35 337 IPR001932 -
Cre02g1020 379 SUPERFAMILY PP2C-like 43 338 IPR036457 -
Cre02g1020 379 FunFam Probable protein phosphatase 2C 42 26 345 - -
Cre02g1020 379 CDD PP2Cc 42 337 IPR001932 -
Cre02g1020 379 Pfam Protein phosphatase 2C 56 306 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g1020 Cre-Chr2:7854427 Cre10g1870 Cre-Chr10:33280439 2.80E-117 dispersed
Cre02g1020 Cre-Chr2:7854427 Cre02g1523 Cre-Chr2:27503923 1.10E-110 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre02g1020 - - - 0.0