Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre02g1047 | ATGCGGGGACAACATTCTCACCCACTGAAGTCGGGTCTAGCCGGACCCGATGAGGAAAACGAACCAGTTCGCTCGTATCTCCCTGGAATGAACGTCCCGTTAGGCGCCGGAATTCGGAAGAAGGGAACTGGAGTCCGACCATGGCTACTACTGGACTCCACCGGCGGAGCTCAGGTAGTTGAGGCCGGAAAACATGTGATTATGCGGCGGACCGGCCTGCCGGCGCGTGACCTTCGGATTCTCGATCCGTTGCTCTCGTACCCATCTACGATTCTTGGCCGTGAGAAAGCGATTGTGATCAATTTGGAGCACATCAAAGCAATTATCACTGCTCAAGATGTGTTCGTGTTGAATGCTAGGGATCCGTCTGTAACCCCCTTTGTAGAGGAGCTTCAGAGACGGGTATTGCGGCACCATCAAGCCACTAAGGCTTCTCAGGAGGGCGTTGGTGATGATTCTAATTGGAGAAATCTATATGACCTGGAGGAGCCTCGTTCAAGGACTCAAAGTCCTCCTAATTCATACCAAGGATTTCCACAGGCTGAAGAGGAGGAGGGGAAGGAAAACATGAAACAAAGTCTTGAAAATCGGGAGGGATTGAAGGTTCTTCCTTTTGAGTTTGTTGCTTTGGAGGCATGCCTTGAAGCTGCTTGCAGTTGCTTAGAAAGCGAAGCAGATACATTGGAGCTCGAAGCTCACCCAGCTTTGGATAAGCTGACTTCTAAGATTAGTACTCTCAATTTGGAACGGGTGCGTCAGATCAAAAGTCGATTGGTTGCAATAACTGGACGAGTTCAAAAGGTGCGGGACGAATTAGAACACTTGCTAGATGATGATGAGGATATGGCTGAGATGTACTTAACAGAAAAGATGGTTCAGCAACAACTTGAGAACTCTTCCACTTCCTCAATTCCTGAGAGAGATGAAATGGAAGATGACGATCAGCAGTCGGGCAAAGATGACAGTATTCCTGCTGAAATATCATTGGACGGTGGTGGAATTTCTGCTAATTATGAAGGCAATATGGATGCTTCCCAGGATCATTTGTTTGGTGCATCAAATGTGGGCAGGGACAGCCATGGGACCCGGACAAGCACTACCCATAGCGCTATAAGCAAACACCTCGATGTGGAGGAACTCGAGATGCTTTTGGAGGCATACTTTGTGCAAATTGATGGTACACTAAACAAACTTTCCACGCTGAGGGAGTATGTAGATGACACAGAAGATTACATCAACATAATGCTGGATGACAAACAGAATCATCTTCTACAAATGGGAGTAATGTTGACAACGGCAACCCTCGTCGTCAGCGCTTTTGTCGTGGTGGCAGGTATCTTCGGAATGAACATCCATATTGAACTGTTTGAACCTGAAAAAGCAGGCATGCCGGAGTTCCTATGGACTGTTGGTGGTGGTGCTACAGGAACCATCTTCTTGTATGTCATTGCCATTGCCTGGTGTAAGCACAAACGCTTGCTCGAGTAG | 1488 | 47.85 | MRGQHSHPLKSGLAGPDEENEPVRSYLPGMNVPLGAGIRKKGTGVRPWLLLDSTGGAQVVEAGKHVIMRRTGLPARDLRILDPLLSYPSTILGREKAIVINLEHIKAIITAQDVFVLNARDPSVTPFVEELQRRVLRHHQATKASQEGVGDDSNWRNLYDLEEPRSRTQSPPNSYQGFPQAEEEEGKENMKQSLENREGLKVLPFEFVALEACLEAACSCLESEADTLELEAHPALDKLTSKISTLNLERVRQIKSRLVAITGRVQKVRDELEHLLDDDEDMAEMYLTEKMVQQQLENSSTSSIPERDEMEDDDQQSGKDDSIPAEISLDGGGISANYEGNMDASQDHLFGASNVGRDSHGTRTSTTHSAISKHLDVEELEMLLEAYFVQIDGTLNKLSTLREYVDDTEDYINIMLDDKQNHLLQMGVMLTTATLVVSAFVVVAGIFGMNIHIELFEPEKAGMPEFLWTVGGGATGTIFLYVIAIAWCKHKRLLE | 495 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 8353547 | 8358171 | - | CrPI670011_02g010470.1 | Cre02g1047 | 490328 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre02g1047 | 495 | Coils | Coil | 211 | 231 | - | - | |
Cre02g1047 | 495 | Gene3D | Magnesium transport protein CorA, transmembrane region | 181 | 423 | - | - | |
Cre02g1047 | 495 | PANTHER | RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL | 36 | 493 | IPR039204 | GO:0015095(PANTHER)|GO:0015693(PANTHER) | |
Cre02g1047 | 495 | MobiDBLite | consensus disorder prediction | 162 | 192 | - | - | |
Cre02g1047 | 495 | FunFam | Magnesium transporter MRS2-1 | 36 | 119 | - | - | |
Cre02g1047 | 495 | MobiDBLite | consensus disorder prediction | 293 | 335 | - | - | |
Cre02g1047 | 495 | Gene3D | - | 37 | 119 | - | - | |
Cre02g1047 | 495 | Pfam | Magnesium transporter MRS2-like | 373 | 418 | - | - | |
Cre02g1047 | 495 | Pfam | Magnesium transporter MRS2-like | 188 | 294 | - | - | |
Cre02g1047 | 495 | Pfam | Magnesium transporter MRS2-like | 53 | 137 | - | - | |
Cre02g1047 | 495 | CDD | Mrs2_Mfm1p-like | 48 | 493 | IPR039204 | - | |
Cre02g1047 | 495 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre02g1047 | Cre-Chr2:8353547 | Cre10g1438 | Cre-Chr10:28110223 | 9.20E-89 | dispersed | |
Cre02g1047 | Cre-Chr2:8353547 | Cre06g1415 | Cre-Chr6:8444609 | 7.30E-78 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre02g1047 | - | - | - | 0.0 |