Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre02g1073 ATGGACGAGGAGACTCAAGCTGTGAACTCCACCACTGACGATTCCGGCGAAGATTTCTACGAGATGATCGAAGCGCCTAAGTTCGTCGACTTCACCATCTCCGATCACTTCATTCCCGATGATCGCTACTGGTTCTGCTCCCGAGTCGGTTGTGAAGAGACGCATCCAGAAGAAATGGACTCTGATGTCGTTTATAAAAACTTTGTTATGCGGGTAATGGAAGCCAGGAGTCCGAATGTGCGGCTTCAGAGAGCTCGAAGGACCCTGAAATGCCCACTTACAGCTCCTCCAAAGTCTTCCAAGTCTCGAGTGGCAAGGCTAGCTCTTATATCTTCCATTTCCAAAAGGATAGTGGATGCAAGAGGGAAATCTAGACCGCCTACTGTCAAGCCTGCTACGAATGCAAAGCCAAAACAAGCTCATGCCAAGGCAATGACTACTCCAAGGAACAGGAAGCTTAACTCCAATACCAATTCTTTTCTGAGTGTTAAAAATTCTAGGACTAGATCAGCTGAAGAGCCAAAGACTACAACGGTAGCTAAGGCTTTGGTCTTTCAATCTCCAAAGAATGATACGAAAAAGGAGACTTCAACAGAAATGAATACTCCTGTGAAAACTATATGTGCAGCAATGAAGAAACTCGAGATTAACAATGCAAAGAAGAATGTATTAGGGGATGGACAGTCATTGCCCCAGGATGTTTTGAAGAAAAAGTTCAGAGGACGTGAGGTGAAGAGCCGGGTTTTTGATTCATTACAAACCAACAGTTTCAAACGTCAGGATGCCAAATCTGTAAGAGTTTTGAAGAGGAGAAGCAAAGAAAAGAAGATAAAGCCGCCTCTTCCTGATATTGTTGTCGAAGAAATTGTTGATGAGGGTGCCAGTGACATGGATATTGATGTGAAGTCAAGGCAAGTTTCAATGCAAGGGTGCTCTCTGTCAATTTCTTCTAAGAGTAATGAAGGAAATCCAGATGAACTTTCAGGACCTGAAGATTCAGATAGTTTGTCCAAAGATGCTAATCAAACTTCAATTTCAAATTCTGAAGCGAGATATTCAGAGAAAAATGATCTTGAGGTTGTTCTATGTGAAGTGGAGGACGAGAAGAACCAAGAACACTCTCAGGAAGAGAAAGTCAAACCAGGTGCTTCAGAACTTCTGGAGAGTGATGATAAAGAAAATGCAGTTGAAATTAATGAAGGTAATCGAGAAGAAAAGGTTTTGCAAATTGTGGAGCCTCTGAACGAGAATACTGATAAAGTGTCCAAGAACTCTAGAGATGATGAGACTAAAGTATCAAATCCGGAGGAGAAAAATTCAGAAGCAAGTGATGTGAAATCAGTTCTGTGCGAAGTGGAGCATGAGAAGAATAACAAATGCAATCATGAAGGGAGAATGAAATCAGGGGAAATACATATGAATATCTCGGAACTTGAGAGCGATGATAAAGAAAATGTAGTGAGTGTAAATAAGGAAAATGCAGTGACCTCTGATGATGATATAGAACATGAAAGTGAAACCACCACAGATGAAAATGTCGCACCTAATGACAACAGGGAAAACAACTCTCACAACCTGTCTGAAAGAGTGGCATTTGGCAAACATGAGATATCTAAAAGTGCAGCAAAGGTCAAGGGAGTATTAAAGAAGACTGTGAAAGAGAAATTTACTCCTGCTGCAGTTGGTTCTCATGGGCTGAAACCCAGCAGACCAAAGGCCACGAATCCCAAGCCATTCAGACTAAGAACTGATGAAAGAGGCGTACTTAGGGAAGCAAACTTGGGGAAAAAAGTTAATTGTCCTTTGAAAGACATCACTGCATCTCGAAGGTTTCATGGGGACAAGTTAGAGAGAAAAAATCAATACACGAAACAAACTTCTGAATGTGAAAATCATATTGAGGAAGAACATGAACAAAGGATGTTAGAGAATAAAACCCCAGACGATCGACAAGGAGGAACAGTACTGGATTCCTTAAACAACAAAAAAGGAGATTCTGAACACAAGTTGTGCACAATGGATTCACAAAATCGTATTGCTTTAAAACACCAGAACCAGAGCCATTGTCGTCTGCTTGAATCTGGCAAAGAGAGAGCAACCAAGACAACAGAGGATAATTTGAAAAGGAATAAATTAGAAAAGATACAGCAAAGAGTTAGGAAGCCTAGAAGGGATGTATCATCTAAAGAAGAAATAACTTCTCTGGTACCATCTCGCCAACACAGTGCAAGGAATGAAACCTTTCTGAAGATATCGAGTCACAAAGATGCTAGAAAACCATCAGGGGCATTATCTCGAAAAAGGAGGCCTGCTGCAACTACTTCAAAGGAGCCAAATCTTCATAGCAATCATCCACCAAGGAGAGCTGCTCAAGAAAATTGGCTAAGACCATTCAAAAAGCAGGTAGAACTTTATTGCTAA 2421 41.18 MDEETQAVNSTTDDSGEDFYEMIEAPKFVDFTISDHFIPDDRYWFCSRVGCEETHPEEMDSDVVYKNFVMRVMEARSPNVRLQRARRTLKCPLTAPPKSSKSRVARLALISSISKRIVDARGKSRPPTVKPATNAKPKQAHAKAMTTPRNRKLNSNTNSFLSVKNSRTRSAEEPKTTTVAKALVFQSPKNDTKKETSTEMNTPVKTICAAMKKLEINNAKKNVLGDGQSLPQDVLKKKFRGREVKSRVFDSLQTNSFKRQDAKSVRVLKRRSKEKKIKPPLPDIVVEEIVDEGASDMDIDVKSRQVSMQGCSLSISSKSNEGNPDELSGPEDSDSLSKDANQTSISNSEARYSEKNDLEVVLCEVEDEKNQEHSQEEKVKPGASELLESDDKENAVEINEGNREEKVLQIVEPLNENTDKVSKNSRDDETKVSNPEEKNSEASDVKSVLCEVEHEKNNKCNHEGRMKSGEIHMNISELESDDKENVVSVNKENAVTSDDDIEHESETTTDENVAPNDNRENNSHNLSERVAFGKHEISKSAAKVKGVLKKTVKEKFTPAAVGSHGLKPSRPKATNPKPFRLRTDERGVLREANLGKKVNCPLKDITASRRFHGDKLERKNQYTKQTSECENHIEEEHEQRMLENKTPDDRQGGTVLDSLNNKKGDSEHKLCTMDSQNRIALKHQNQSHCRLLESGKERATKTTEDNLKRNKLEKIQQRVRKPRRDVSSKEEITSLVPSRQHSARNETFLKISSHKDARKPSGALSRKRRPAATTSKEPNLHSNHPPRRAAQENWLRPFKKQVELYC 806
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 8904778 8908734 + CrPI670011_02g010730.1 Cre02g1073 490354

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cre02g1073 806 MobiDBLite consensus disorder prediction 334 351 - -
Cre02g1073 806 MobiDBLite consensus disorder prediction 119 157 - -
Cre02g1073 806 MobiDBLite consensus disorder prediction 731 747 - -
Cre02g1073 806 MobiDBLite consensus disorder prediction 460 488 - -
Cre02g1073 806 MobiDBLite consensus disorder prediction 460 525 - -
Cre02g1073 806 MobiDBLite consensus disorder prediction 577 592 - -
Cre02g1073 806 MobiDBLite consensus disorder prediction 511 525 - -
Cre02g1073 806 MobiDBLite consensus disorder prediction 691 730 - -
Cre02g1073 806 MobiDBLite consensus disorder prediction 352 410 - -
Cre02g1073 806 MobiDBLite consensus disorder prediction 559 592 - -
Cre02g1073 806 MobiDBLite consensus disorder prediction 310 446 - -
Cre02g1073 806 MobiDBLite consensus disorder prediction 634 668 - -
Cre02g1073 806 PANTHER NEUROFILAMENT HEAVY PROTEIN 7 402 - -
Cre02g1073 806 MobiDBLite consensus disorder prediction 495 510 - -
Cre02g1073 806 MobiDBLite consensus disorder prediction 419 446 - -
Cre02g1073 806 MobiDBLite consensus disorder prediction 691 795 - -
Cre02g1073 806 MobiDBLite consensus disorder prediction 310 326 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre02g1073 - - - - 0.0
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g820 . . . . . Bpe12g00727 . . Cmo19g00528 Cmo11g01438 . . . . Sed10g1931 Cpe04g00342 Cpe15g00411 Bhi05g00992 Tan02g1082 Cmetu01g1396 . Hepe02g0673 . . Cla02g00723 Cam02g0771 Cec02g0767 Cco02g0798 Clacu02g0765 Cmu02g0758 Cre02g1073 . . . Cone10ag1074 Lsi03g00640 Csa07g00652 . Cme01g00151 . . Bda15g00474 . . . . Bma08g00023 . . . Cma11g01685 Cma19g00515 Car11g01155 Car19g00390 . . . . . . . . . . . . . . . . . . Chy01g00160 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0008141 1 2 0 1 1 1 2 1 1 1 1 1 2 1 1 2 1 1 2 1 1 1 1 1 1 1 1 2 1 1 35