Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre02g1074 ATGACTAATTCACCATTTCCCGCCGGAAAACCCTCCCGCCGCCGCCCTCCTCCGGTGGCTCTCCTCCTCCTCCTCTTCCTCCTCTGTTCACTTTCCCTCTCCCATGGTGATGAACTTCACCCACTTTTAGACCTCAAATCTGCCCTCTCCAACAACTCAACCTTCTCCTCTTCTTTGGTTTTCAACTCTTGGATTAAAGGAAATGATGTTTGCAGCAGCTTCCATGGCATTGTCTGTGATTCCAATGGCTTTGTAGTGGAAATCAATCTCTCTGCTCACAACTTATCTGGGATTCTTCCTTTTGATTCCATTTGCTCTTTGCAATCTCTTGAGAAGTTGTCTTTTGGGTCTAATTTTTTGTATGGGAAGGTCAGTGATGGTTTGAGAAACTGTTCCAAGTTGAAGTATTTGGATTTGGGTCAGAATGTGTTTTCTGGTGAAGTACCTGATTTGTCTTCTTTAGTGGGATTGAGATTCTTGAGCTTGAATAACAGTGGGTTTTCTGGAGATTTTCCTTGGAAATCTCTTCTTAATCTTACTGATTTGGAGTTCTTAAGCCTTGGAGACAATATATTTAACCCAACAACTTCATTCCCATCAGAAATTCTCGACCTTAAGAACCTTCGATGGCTTTACCTCTCTAACTGCACAATTCATGGAGAAATCCCATCAAGGATTGGGAACCTGTCTTTGCTTGAGAATCTTGAGCTCTCACAAAATAAACTCACAGGTGAAATTCCTTCTGAGATTGTGAACCTGAAGAAGCTATGGCAACTGGAGTTACATGAGAATTCCTTGACCGGGAAGCTTCCGGTCGGGTTCGGTAACCTCACTGGACTGAGGAAGTTTGATGCCTCATCTAATAATCTTGTAGGTGATTTGATGGAGTTGAGGTTCTTGACCAATCTGGAGTCCTTGCAGCTCTTTGAAAATCAATTTTCCGGTACGATTCCGGAGGAGTTTGGGGACTTTAGGGACCTTGTTGAACTCTCTCTTTACCAAAACAAGCTCACTGGCAACCTCCCTCAAAGAATTGGATCTTGGGCAGCCTTCATTTTCATTGATGTTTCGGAGAATTTCTTGTCTGGACCTATACCTCCAGACATGTGCAAGCAGGGCAATATGACTGATCTCTTGATGTTGCAAAACAATTTCATTGGTGGAATCCCAGAAAGCTACATGAACTGTACATCTTTGAATCGATTTCGTGTAAACAATAACTCTCTTTCGGGTGTTGTTCCTGCTGGGATTTGGAGTCTGCCAAATCTTACTATCATTGATCTTTCAATGAATCAGTTTGAAGGTCCTGTGACTTCGGATATCAGTAAAGCAAAAGCTCTTGCTCAGTTGTTCTTATCGAATAACCGGTTTTCTGGAAACTTACCGCCTGAGCTTGGTGATGTATCATCCTTAGTCTCAATCAAGCTCGATTCGAACCAATTTGTTGGTCAAATACCCGAATCACTTGGCAAGTTGAAGGACTTAAGCAGCCTTTCTTTGAACAACAACAAATTTTCCGAAAACATACCTAACTCATTAGGCTCTTGCAGTTCTCTTTCTACCATAGATCTATCTATGAACTCATTCTCCGGGTATATTCCGGAGAATCTTGGTTACTTGCCAATTCTAAACTCCTTGAATCTGTCTAACAACAAACTTTCAGGTGAAATTCCAACTAGTTTTTCGCAGTTGAAGCTAAGCAGTTTGGACCTGTCTAATAACAGGTTAATTGGCCAAGTACCTGAATCACTCGCAATCCAAGCCTTTGATGAAAGTTTCATGGGAAATCCTGGCTTGTGCAGTGACTCTCTCGGATACTTGAGTTCATGTTCACCAACCTCTAGATCATCCAGCCATCTCAGCTCGTTGCTGTCATGTACCATTGCTGGAATCCTAGTGTTGCTCATGTCCTTCTCGTTCTTGTTGTTTGTTAAATGGAAGCGTAACAAGGATGCTAAGCATTTACTGATATCCAAATCATGGGATATGAAGCCGTTCCGAATAGTGTGCTTCACGGAAAAGGAAATCATTGATTCAATCAATTCTCACAACTTGATAGGAAGAGGAGGATCTGGAAATGTTTACAAAGTCGTACTAAGTAATGGCAAAGAACTCGCCGTGAAACATATATGGCAGTCAAGCTCCAGGGACCAAGCAAATTGTCGGACCAATGCAACCATGTTAACTAAAAGAAAGACCAGGTCATCCGAATATGATGCAGAAGTAGCTACATTGAGTTCAGTGAGGCATAACAATGTGGTGAAATTATACTGCAGCATTTCGAGCGAGGATAGTAACCTGTTGGTCTACGAGTACTTACCAAATGGAAGTTTATGGGATCAGCTGCACACTAGCAGGAAGATTGAGATGGGATGGCAGATAAGGTACGAGGTAGCGGTTGGAGCAGCAAGGGGACTCGAGTATTTACATCATGGGTGTGACCGACCTGTTATTCACCGAGATGTGAAGTCGAGTAATATTTTGTTGGATAGTGATTGGAAACCTAGGATTGCAGATTTTGGGCTAGCTAAGATTCTGCAGGATGGCCATGGGGTTGGAGATTCATCTCATGTCATTGCTGGAACACTCGGTTATATAGCCCCTGAATATGCATACACGTGCAAGATAAATGAGAAGAGTGACGTTTACAGCTTCGGAGTTGTCCTAATGGAACTAGTAACAGGAAAGCAGCCCAATGAGCCAGAGTTTGGGGAGAACAAACACATTGTACAATGGGCACACAGCAGAATGAGAGACCTAAAAGGTAATCTGAAAGATATGGTAGATCCTAGCATCTCAGAGGCTCAAGTGGAGGATGCAGTCAAAGTGCTAAGAATTGCACTTCGCTGCACGGCTAAGATTCCATCTACAAGGCCCTCGATGAGAATGGTAGTTCATATGCTTGAAGAGGCTGAGCCTTATAACTTTATTGACATTGTGGTCAAGAAAGAATGTGAAAAGTAA 2964 42.61 MTNSPFPAGKPSRRRPPPVALLLLLFLLCSLSLSHGDELHPLLDLKSALSNNSTFSSSLVFNSWIKGNDVCSSFHGIVCDSNGFVVEINLSAHNLSGILPFDSICSLQSLEKLSFGSNFLYGKVSDGLRNCSKLKYLDLGQNVFSGEVPDLSSLVGLRFLSLNNSGFSGDFPWKSLLNLTDLEFLSLGDNIFNPTTSFPSEILDLKNLRWLYLSNCTIHGEIPSRIGNLSLLENLELSQNKLTGEIPSEIVNLKKLWQLELHENSLTGKLPVGFGNLTGLRKFDASSNNLVGDLMELRFLTNLESLQLFENQFSGTIPEEFGDFRDLVELSLYQNKLTGNLPQRIGSWAAFIFIDVSENFLSGPIPPDMCKQGNMTDLLMLQNNFIGGIPESYMNCTSLNRFRVNNNSLSGVVPAGIWSLPNLTIIDLSMNQFEGPVTSDISKAKALAQLFLSNNRFSGNLPPELGDVSSLVSIKLDSNQFVGQIPESLGKLKDLSSLSLNNNKFSENIPNSLGSCSSLSTIDLSMNSFSGYIPENLGYLPILNSLNLSNNKLSGEIPTSFSQLKLSSLDLSNNRLIGQVPESLAIQAFDESFMGNPGLCSDSLGYLSSCSPTSRSSSHLSSLLSCTIAGILVLLMSFSFLLFVKWKRNKDAKHLLISKSWDMKPFRIVCFTEKEIIDSINSHNLIGRGGSGNVYKVVLSNGKELAVKHIWQSSSRDQANCRTNATMLTKRKTRSSEYDAEVATLSSVRHNNVVKLYCSISSEDSNLLVYEYLPNGSLWDQLHTSRKIEMGWQIRYEVAVGAARGLEYLHHGCDRPVIHRDVKSSNILLDSDWKPRIADFGLAKILQDGHGVGDSSHVIAGTLGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKQPNEPEFGENKHIVQWAHSRMRDLKGNLKDMVDPSISEAQVEDAVKVLRIALRCTAKIPSTRPSMRMVVHMLEEAEPYNFIDIVVKKECEK 987
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 8909098 8912176 - CrPI670011_02g010740.1 Cre02g1074 490355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre02g1074 987 Gene3D Ribonuclease Inhibitor 196 350 IPR032675 -
Cre02g1074 987 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 487 608 - -
Cre02g1074 987 Gene3D Phosphorylase Kinase; domain 1 664 772 - -
Cre02g1074 987 SMART LRR_typ_2 492 516 IPR003591 -
Cre02g1074 987 SMART LRR_typ_2 253 276 IPR003591 -
Cre02g1074 987 SMART LRR_typ_2 300 323 IPR003591 -
Cre02g1074 987 SMART LRR_typ_2 205 229 IPR003591 -
Cre02g1074 987 SMART LRR_typ_2 540 564 IPR003591 -
Cre02g1074 987 Pfam Leucine rich repeat N-terminal domain 37 80 IPR013210 -
Cre02g1074 987 SUPERFAMILY L domain-like 379 594 - -
Cre02g1074 987 ProSitePatterns Protein kinases ATP-binding region signature. 686 708 IPR017441 GO:0005524(InterPro)
Cre02g1074 987 Gene3D Ribonuclease Inhibitor 352 618 IPR032675 -
Cre02g1074 987 Gene3D Transferase(Phosphotransferase) domain 1 773 981 - -
Cre02g1074 987 FunFam Receptor-like protein kinase HAIKU2 663 772 - -
Cre02g1074 987 Pfam Protein kinase domain 682 966 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre02g1074 987 Gene3D Ribonuclease Inhibitor 37 195 IPR032675 -
Cre02g1074 987 FunFam Inactive leucine-rich repeat receptor-like protein kinase 391 486 - -
Cre02g1074 987 SMART serkin_6 680 975 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre02g1074 987 FunFam Receptor-like protein kinase 7 124 374 - -
Cre02g1074 987 SUPERFAMILY L domain-like 55 208 - -
Cre02g1074 987 ProSiteProfiles Protein kinase domain profile. 680 977 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre02g1074 987 Pfam Leucine rich repeat 518 576 IPR001611 GO:0005515(InterPro)
Cre02g1074 987 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 26 971 IPR050647 -
Cre02g1074 987 ProSitePatterns Serine/Threonine protein kinases active-site signature. 817 829 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre02g1074 987 SUPERFAMILY Protein kinase-like (PK-like) 659 969 IPR011009 -
Cre02g1074 987 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 773 984 - -
Cre02g1074 987 SUPERFAMILY L domain-like 197 436 - -
Cre02g1074 987 Pfam Leucine Rich Repeat 447 466 IPR001611 GO:0005515(InterPro)
Cre02g1074 987 Pfam Leucine Rich Repeat 495 516 IPR001611 GO:0005515(InterPro)
Cre02g1074 987 Pfam Leucine Rich Repeat 207 229 IPR001611 GO:0005515(InterPro)
Cre02g1074 987 Pfam Leucine Rich Repeat 232 253 IPR001611 GO:0005515(InterPro)
Cre02g1074 987 Pfam Leucine Rich Repeat 302 323 IPR001611 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g1074 Cre-Chr2:8909098 Cre11g1911 Cre-Chr11:30884701 1.10E-85 dispersed
Cre03g1732 Cre-Chr3:34110727 Cre02g1074 Cre-Chr2:8909098 7.30E-06 dispersed
Cre09g1093 Cre-Chr9:11323980 Cre02g1074 Cre-Chr2:8909098 1.80E-07 dispersed
Cre02g1074 Cre-Chr2:8909098 Cre11g1910 Cre-Chr11:30867215 5.10E-163 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63861 PF00069 Pkinase 3.00E-45 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre02g1074 - - - 0.0