Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre02g1083 ATGATTTCCATTGCCCAAAATCCCAATGTCTCCTCCGAACTCTCCTCCTCTCCCCCGCCTTCCACCGCCACAACCCATACTTTCCGATCCAAATTACCCGATATTACAATCCCCCACCACCTCCCTCTTCACAGTTACTGCTTTCAGAAGCTCTCTGAAGTTTCCCACCGCCCCTGTTTGATCGTCGGCTCCACTGGCAAATCCTATTCCTACTCCGACACCTACCTCTTCTCCCGGAAAGCCGCCGCCACTTTCTCTAAACTTGGAGTTAAGAAAGGCGATGTCATTATGATTCTTCTCCACAACTCTCCCCAATTTGTTTTCTCTTTTATGGCTTCCTCCATGCTCGGCGCCGTCGCCACCACCGCAAATCCGTACTACACGGCGGCGGAGATTTCCAAGCAGTTGAAGGCCTCCGGTGCCAAATTCGTGGTTACTTACTCCCAATGCGTCCACAAGCTCAAAGAATTCGGCGAACATCTCACCATTGTCACCGTCGATGACCCGCCAGAGAATTGTCTGAGCTTCTCGATGGTGTACGACGCCGATGTGAATGACGTCCCCTCCGTGGAGATTGACACAAACGACGCCGTTTCGCTACCGTTCTCCTCTGGCACGACCGGGCTCCCGAAGGGTGTGATTTTGACTCATAAGAACATGGTGTCGAGTGTGGCTCAACAGGTGGATGGAGAGAATCCAAACTTGTATTTAAGAAGAAACGACGTCGTGTTATGCGTGCTACCAATGTTCCACATATTCTCGTTGAGCAGCATAGTTTTGATATCAATTAGGTCAGGGGCAGCGCTGCTTTTGATGGAGAAGTTCGAGATAGAGTCATTGCTAAGGCTAATAGAGAGGCACGAGGTGACAGTGGCGGCGGTGGTGCCGCCGCTTGTGGTAGCGCTAGTGAAGAACCCGAGGGTGGCGGATTTTGACCTGAGCTCGATTAGATTGGTCCTTTCCGGAGCGGCGCCTCTGCGGAAGGAGCTGGAGGAGGCTCTCATGGAGAGGCTTCCTCAAGCCATTTTTGGTCAGGGTTATGGGATGACGGAAGCGGGTCCCGTGCTGAGCATGTGCTCGGCTTTTGCAAAGGAGCCAGTGATGCCAACAAAATCAGGTTCCTGTGGCAGAGTAGTGAGAAACTCGGAACTGAAAGTCATTGACCCACAAACCGGCGACTCCCTCACTTATAATCAACCTGGAGAGATTTGTGTTCGAGGTCCTCAAGTAATGAAAGGATATTTGAACGACCCGGTGTCCACGTCCTTGACTGTCGACGTGGAGGGTTGGCTTCATACGGGTGACATTGGTTACATTGACGATGAAGATGAAATTTTTATTGTTGACAGAGTCAAAGAGATCATTAAATTTAAAGGTTTTCAGGTGGCACCAGCAGAGTTAGAGGCCCTTCTTGTAACCCATCCATCTATTGTGGATGCCGCTGTTGTCCCGCAAAATGATGATGTTGCTGGTGAAGTTCCAGTGGCTTTCGTAGTTCCATCAACTCATGATGAACTTACTGAGGACGCAGTAAAAGACTTCATAGCAAAGCAGGTTGTGTTCTACAAGAGATTGCAGAAAGTGTATTTTGTGCAAACAATTCCAAAATCACCCTCTGGAAAGATTTTGAGAAAGGAACTCAAAGCCAAGCTCTCAGTGTCACCTGCATTTTAG 1674 49.58 MISIAQNPNVSSELSSSPPPSTATTHTFRSKLPDITIPHHLPLHSYCFQKLSEVSHRPCLIVGSTGKSYSYSDTYLFSRKAAATFSKLGVKKGDVIMILLHNSPQFVFSFMASSMLGAVATTANPYYTAAEISKQLKASGAKFVVTYSQCVHKLKEFGEHLTIVTVDDPPENCLSFSMVYDADVNDVPSVEIDTNDAVSLPFSSGTTGLPKGVILTHKNMVSSVAQQVDGENPNLYLRRNDVVLCVLPMFHIFSLSSIVLISIRSGAALLLMEKFEIESLLRLIERHEVTVAAVVPPLVVALVKNPRVADFDLSSIRLVLSGAAPLRKELEEALMERLPQAIFGQGYGMTEAGPVLSMCSAFAKEPVMPTKSGSCGRVVRNSELKVIDPQTGDSLTYNQPGEICVRGPQVMKGYLNDPVSTSLTVDVEGWLHTGDIGYIDDEDEIFIVDRVKEIIKFKGFQVAPAELEALLVTHPSIVDAAVVPQNDDVAGEVPVAFVVPSTHDELTEDAVKDFIAKQVVFYKRLQKVYFVQTIPKSPSGKILRKELKAKLSVSPAF 557
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 9145225 9151894 + CrPI670011_02g010830.1 Cre02g1083 490364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre02g1083 557 Pfam AMP-binding enzyme 56 415 IPR000873 -
Cre02g1083 557 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 22 548 - GO:0016207(PANTHER)|GO:0016405(PANTHER)
Cre02g1083 557 ProSitePatterns Putative AMP-binding domain signature. 200 211 IPR020845 -
Cre02g1083 557 MobiDBLite consensus disorder prediction 1 27 - -
Cre02g1083 557 SUPERFAMILY Acetyl-CoA synthetase-like 25 550 - -
Cre02g1083 557 Pfam AMP-binding enzyme C-terminal domain 466 541 IPR025110 -
Cre02g1083 557 CDD 4CL 37 547 - -
Cre02g1083 557 Gene3D - 21 451 IPR042099 -
Cre02g1083 557 FunFam Long-chain-fatty-acid--CoA ligase FadD 29 452 - -
Cre02g1083 557 Gene3D - 452 553 IPR045851 -
Cre02g1083 557 FunFam 4-coumarate--CoA ligase 2 453 554 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g1083 Cre-Chr2:9145225 Cre09g0339 Cre-Chr9:3306460 4.30E-183 dispersed
Cre02g1083 Cre-Chr2:9145225 Cre10g1429 Cre-Chr10:27987157 8.00E-190 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre02g1083 K01904 - csv:101221344 926.006