Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre02g1130 ATGACCTTCATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAATCTTCTTGCAATGGACTCAATTTTGATGGGATTCTCTTGCTTTCCTTTAAGTATGCCGTTTTGGATGATCCTCTCTTTGTTCTTCAGAATTGGAATTACTCCGACGACACCCCCTGTTCATGGCGAGGAGTCGTATGTTCCGCCGATGGTTCCGGTGGCTCTAGAGTTACAGGTTTGTCTCTTCCGAGTTCTCAGCTTATGGGCTCTGTTTCTTCTGATTTAGGTCTGATTCAAAATCTTCAATCGGTTGATCTTTCTAACAATTCCTTTAATGGGTCTCTTCCCCGGTCTCTGTTCAACGCCACCATGCTCCGGTTTCTTGATTTGTCCGATAATTTGATTTCCGGCGAGGTTCCTGGGCCAGAGGGTGACCTTAGGAATCTGCAAGTTCTTAACCTTTCCGGTAATGCTCTGTTCGGGAAGTTTCCGAGTGATCTCGTGAATTTGAGTAATCTCACGGTTGTGTCTCTGAAGAACAATTACATTTCCGGTGAAATTCCCGGTGGGTTTAAAACGGTGGAGGTTTTGGATCTGTCTTCCAATTTGATTAATGGGTCTTTGCCGTCTGATTTTGGTGGCGACAGTTTACATTACTTTAACATCTCATACAACAGACTTTCCGGCGAAATTCCGCCGGATTTCGCCCACAAAATTCCGGCTAATGCCATAATTGATCTCTCCTTCAACAACCTCACCGGAGAAGTCCCTGTTTCCGACGTGTTCATGAACCAAGAAGCAAACTCCTTCACCGGAAACCGCCAACTCTGCGGTGAGTTAACGAAAACCCCATGCCCAATTACGTCATCGCCATCGTCTCTCCCACCGGCCATCGCCGCCATTCCGCTAGACCCAAGTACTCCGGAAACGACCTCGCCGGAAAAGCAGAGCGAAACAGGGTTTAAACCGTCCACAATCGTGGCCATTGTACTGGGAGACGTCGTCGGATTGGCAATTCTGTGCCTCCTCTTCTTCTACGTCTTCCATTTGAAGAAAAAAAACAAAGCCGTCGAAACCCATTTGAAAAACGAACCCAATTTAGCCAAAGACAGTTGGTCCACATCCTCATCGGAATCCAGAGGATTTTCACGATGGTCCTGCCTCAGAAAAACAGGGGATCCAGAAGAGGCAAATTCCGATCAAGCGAGTGTGTTATCCTTCTCCGGCCATCGCGAGACGGCGGAGGAGGGTGCAGAAGAGAACAAGAGAGGAACATTAGTGACAGTAGACGGCGGAGAGAAGGAGCTGGAACTGGATACTCTACTGAAGGCATCGGCGTACATTCTGGGCGCCACCGGATCGAGCATAACGTACAAGGCGGTGCTGGAAGACGGCACGGCGTTTGCAGTGAGGAGAATCGGAGACGGCGGAGTGGAAAAATATAAAGATTTCGAGAATCAGATTCGTGTTGTAGCTAAATTGGTCCACCCAAATTTGGTTCGTGTTCGTGGATTTTATTGGGGTGCTGATGAAAAGCTCATTATTTATGATTTTGTTCCTAATGGTAGCCTTGCCAATGCTCGTTACAGGAAAATGGGCTCTTCGCCTTGTCATCTTCCATGGGAGGCCCGATTGAGAATTGCAAAAGGAGTGGCCCGTGGCCTTTCTTATCTCCACGACAAGAAGCATGTCCATGGCAACTTAAGGCCCACCAACATTCTTCTCGGCTTCGATATGGAGCCCAAGATAGGCGATTTCGGCCTCGACAAGCTCTTCTTGGGCGACTCCAGCTATAAACCCGGTGGCTCCACTCGAAATTTTGGGAGTAAAAGGTCTACAGCGTCTCGGGATAGCTTCCAAGATTTTGTCACCGGACCGAGCCCTGGACCGAGCCCGAGCTCCATCAGTGGGGTGTCGCCGTATTTAGCACCGGAGTCGCTTCGAAGCTTGAAGCCCAACTCGAAATGGGATGTCTACTCTTTTGGTGTGATATTGCTTGAGTTACTAACTGGAAAGATTGTAGTGTTGGATGAGTTGGGGCAAGGGCTTGGGCTTGCCAGCGAGGACAAGAGTCGAACCTTAAGGATGGCTGACATGGCGATTCGAGCAGACGTGGAAGGTAGAGAAGAAGCATTGTTGTCTTGCTTTAAATTAGGATATAGTTGTGCATCTCCTGCCCCACAAAAGAGACCATCCATGAAAGAAGCCTTGCAAGTTTTGGAGAAATTTCCAACCATATCAATGTCATCACACTATTATGGTCTCTAG 2256 47.96 MTFILLLLLLLLLLLLQSSCNGLNFDGILLLSFKYAVLDDPLFVLQNWNYSDDTPCSWRGVVCSADGSGGSRVTGLSLPSSQLMGSVSSDLGLIQNLQSVDLSNNSFNGSLPRSLFNATMLRFLDLSDNLISGEVPGPEGDLRNLQVLNLSGNALFGKFPSDLVNLSNLTVVSLKNNYISGEIPGGFKTVEVLDLSSNLINGSLPSDFGGDSLHYFNISYNRLSGEIPPDFAHKIPANAIIDLSFNNLTGEVPVSDVFMNQEANSFTGNRQLCGELTKTPCPITSSPSSLPPAIAAIPLDPSTPETTSPEKQSETGFKPSTIVAIVLGDVVGLAILCLLFFYVFHLKKKNKAVETHLKNEPNLAKDSWSTSSSESRGFSRWSCLRKTGDPEEANSDQASVLSFSGHRETAEEGAEENKRGTLVTVDGGEKELELDTLLKASAYILGATGSSITYKAVLEDGTAFAVRRIGDGGVEKYKDFENQIRVVAKLVHPNLVRVRGFYWGADEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLRIAKGVARGLSYLHDKKHVHGNLRPTNILLGFDMEPKIGDFGLDKLFLGDSSYKPGGSTRNFGSKRSTASRDSFQDFVTGPSPGPSPSSISGVSPYLAPESLRSLKPNSKWDVYSFGVILLELLTGKIVVLDELGQGLGLASEDKSRTLRMADMAIRADVEGREEALLSCFKLGYSCASPAPQKRPSMKEALQVLEKFPTISMSSHYYGL 751
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 10164067 10166790 - CrPI670011_02g011300.1 Cre02g1130 490411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre02g1130 751 FunFam Leucine-rich repeat receptor-like protein kinase 189 283 - -
Cre02g1130 751 MobiDBLite consensus disorder prediction 301 315 - -
Cre02g1130 751 SUPERFAMILY L domain-like 32 274 - -
Cre02g1130 751 ProSiteProfiles Protein kinase domain profile. 439 742 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre02g1130 751 Gene3D Transferase(Phosphotransferase) domain 1 515 747 - -
Cre02g1130 751 Pfam Leucine Rich Repeat 168 188 IPR001611 GO:0005515(InterPro)
Cre02g1130 751 Pfam Leucine Rich Repeat 212 232 IPR001611 GO:0005515(InterPro)
Cre02g1130 751 Pfam Leucine Rich Repeat 96 117 IPR001611 GO:0005515(InterPro)
Cre02g1130 751 Pfam Leucine Rich Repeat 190 209 IPR001611 GO:0005515(InterPro)
Cre02g1130 751 FunFam Leucine-rich repeat receptor-like protein kinase 23 185 - -
Cre02g1130 751 CDD STKc_IRAK 445 739 - -
Cre02g1130 751 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 188 738 IPR050647 -
Cre02g1130 751 SUPERFAMILY Protein kinase-like (PK-like) 444 737 IPR011009 -
Cre02g1130 751 Gene3D Phosphorylase Kinase; domain 1 408 514 - -
Cre02g1130 751 MobiDBLite consensus disorder prediction 614 634 - -
Cre02g1130 751 Pfam Leucine Rich repeats (2 copies) 120 155 IPR025875 -
Cre02g1130 751 Pfam Protein kinase domain 445 734 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre02g1130 751 Gene3D Ribonuclease Inhibitor 24 187 IPR032675 -
Cre02g1130 751 Gene3D Ribonuclease Inhibitor 188 283 IPR032675 -
Cre02g1130 751 Pfam Leucine rich repeat N-terminal domain 24 64 IPR013210 -
Cre02g1130 751 MobiDBLite consensus disorder prediction 385 418 - -
Cre02g1130 751 MobiDBLite consensus disorder prediction 294 315 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g1130 Cre-Chr2:10164067 Cre05g1202 Cre-Chr5:11662292 3.80E-150 dispersed
Cre02g1130 Cre-Chr2:10164067 Cre05g2421 Cre-Chr5:35664947 5.50E-77 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63862 PF00069 Pkinase 6.60E-30 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre02g1130 - - - 0.0