Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre02g1140 | ATGGGAACCCTTTCCTTCCCAATTGCGTCCTCAAAATCCCGACTCTTATCGACTCCGCATCCAATTGCTTTTTCTATCCGTTTTCTTCAAACATCTTTCCCTTCTTCTGCAATTCACCTTCGTAATTCTCCCATTCTCCATCTACGGCGACGTGTTCTCTGTTCTGCTGCAGAAACTGGTCGTTCGAATCACGATGACCACCACCATGTTCATGATCACCAGCACCACCAGCACCAGCACCAGCACCAGCACCACCACCAGCACCAGCACCAGCACCAGCACCAGCACCACCACCATGGTCATCACCATTGTGATCATGATGTGGAGCTGTCTGGGCCTCAGAAAGCGGTGATTGGATTTGCTAAAGCCATTAGGTGGACAGACTTGGCTAGCTATCTCAGGGAACACTTGCAATTATGTTGCTGCTCTATGGCTTTGTTTGTAGCTGCTGCTGTTTCCCCATATTTGGTGCCGAAGCTCATTGCAAAGCCTTTGCAAAATGCTTTCATTGTCATTGCTTTTCCTTTAGTCGGGGTCTCCTCATCCCTTGATGCTTTAACTGATATTAGTGGTGGAAAAGTAAACATCCATACACTTATGGCTCTTGCAGCCTTTGCTTCCATCTTTATGGGGAACGCCTTGGAAGGAGGACTACTACTTGCCATGTTTAATTTGTCTCACATTGCGGAAGAGTATTTTACAAGTCGTGCAATGATTGATGTCAAAGAGTTGAAGGAAAACTATCCAGACTCTGCCCTTGTTTTAGATACAAATGATGGTAAACTTCCAAATATTACAGATTTGTCCTACCAAAAGGTGCCTGTCCATGATATAGAGTTGGACTCCTATATATTGGTTGGAGCTGGTGAGTTTGTGCCTATAGATTGTGAAGTTTTCCAAGGTAGTGCTACAGTCACCATTGAGCACCTAACCGGTGAAATCAAACCATTGGAGATTACGGTTGGAAGCAGAGTTCCTGGTGGTGCAAGAAACTTGGATGGTAGGATAATCGTGAAGGCAACAAAGACCTGGAAAGAGTCAACTTTGAGTCGTATAGTGAACTTGACTGAAGAAGCACAACTGAATAAGCCAAGACTTCAGAGGTGGCTTGATGAATTTGGTGAGCATTATAGCAAAGCAGTTGTAGTATTGGCCATTGCTATTGCCCTCGTTGGTCCAATATTATTCAAGTGGCCATTTATTGGTACATCAGCTTGTAGAGGATCGGTTTACAGAGCTCTAGGCCTCATGGTGGCAGCATCACCTTGTGCTTTGGCAGTTGCACCATTGGCTTATGCTATTGCAATTAGTTCCTGTGCAAGAAAGGGGATATTGTTGAAAGGTGGGCGTGTATTAGATGCTTTAGCTTCTTGTCACACTATAGCATTTGATAAAACTGGGACGTTGACTACTGGGGGGCTCATTTTCAAAGCGATTGAACCAATTTACGGACATGAGGTTGGAGAAAACAAATCAGACTTTGGTTCCTGTTGCATTCCCTGCTGTGAAGAAGAAGCTCTTGCTGTAGCAGCTGCCATGGAGAAGGGTACTACTCACCCCATTGGAAGAGCTGTGGTCGACCATAGTATGGGAAAAGACCTCCCATCCTTTTCTGTCCAGAATTTGGAATATTTTCCGGGTAGAGGACTTGTTGCAACTCTGCATGGTACTGAGTCGGGAACTGAAGGTGGGAAACTATTGAAAGCATCTCTTGGGTCCTTAGATTTCATCACTTCATGCTACAAATCAGAAACCAAATCAAAAGAGATCAAAGAAGCTGCGAGCACATCTTCATATGGAAGTGAGTTTGTTCATGCTGCTCTTGCAGTTGATGGGAAGGTAACACTTATTCATCTTGAGGATCGACCTCATCCTGGAGTTTCAAGTGTAATAGCTGAATTAACAGATAGAGCTAAACTTCATGTAATGATGTTGACTGGAGATCATGAGTCAAGTGCACGGAGAGTGGCAAACGCAGTGGGCATCAAGGAAGTTCACTTCAGTCTAAAGCCTGAAGACAAGCTTAGTCACGTCAAAAGTATCTCTAGGGAGAATGGAGGAGGACTAATTATGGTTGGTGAAGGCATTAATGATGCACCAGCCCTTGCTGCTGCTACCGTAGGCATAGTGCTTGCTCAACGTGCTAGTGCAACTGCTATAGCTGTGGCTGATGTTCTGTTGCTGCGGGATAACATATCTGGTGTACCATTCTGTATTGCCAAGTCTCGCCAGACGACTGCCCTAGTTAAACAGAATGCTAGTCTTGCTTTGTTTTCAATATTTGTGGCCTCTCTTCCTGCAGTTCTAGGGTTTCTTCCCTTGTGGTTAACGGTACTTCTGCACGAAGGTGGTACTCTTCTCGTTTGCCTCAATTCCATACGTGCTCTGAATAATCCTAGTTGGTCCTGGAAGCAGGACTTGAAGCAATTGCTAATGGAGCTGAAATTTAAAGACTCGCAGCCTAGCCATAATACCAGCTCTACTACTCTACAATCTTCCCCTGTATAG | 2508 | 44.86 | MGTLSFPIASSKSRLLSTPHPIAFSIRFLQTSFPSSAIHLRNSPILHLRRRVLCSAAETGRSNHDDHHHVHDHQHHQHQHQHQHHHQHQHQHQHQHHHHGHHHCDHDVELSGPQKAVIGFAKAIRWTDLASYLREHLQLCCCSMALFVAAAVSPYLVPKLIAKPLQNAFIVIAFPLVGVSSSLDALTDISGGKVNIHTLMALAAFASIFMGNALEGGLLLAMFNLSHIAEEYFTSRAMIDVKELKENYPDSALVLDTNDGKLPNITDLSYQKVPVHDIELDSYILVGAGEFVPIDCEVFQGSATVTIEHLTGEIKPLEITVGSRVPGGARNLDGRIIVKATKTWKESTLSRIVNLTEEAQLNKPRLQRWLDEFGEHYSKAVVVLAIAIALVGPILFKWPFIGTSACRGSVYRALGLMVAASPCALAVAPLAYAIAISSCARKGILLKGGRVLDALASCHTIAFDKTGTLTTGGLIFKAIEPIYGHEVGENKSDFGSCCIPCCEEEALAVAAAMEKGTTHPIGRAVVDHSMGKDLPSFSVQNLEYFPGRGLVATLHGTESGTEGGKLLKASLGSLDFITSCYKSETKSKEIKEAASTSSYGSEFVHAALAVDGKVTLIHLEDRPHPGVSSVIAELTDRAKLHVMMLTGDHESSARRVANAVGIKEVHFSLKPEDKLSHVKSISRENGGGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRDNISGVPFCIAKSRQTTALVKQNASLALFSIFVASLPAVLGFLPLWLTVLLHEGGTLLVCLNSIRALNNPSWSWKQDLKQLLMELKFKDSQPSHNTSSTTLQSSPV | 835 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 10378775 | 10405230 | - | CrPI670011_02g011400.1 | Cre02g1140 | 490421 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre02g1140 | 835 | Gene3D | - | 473 | 623 | IPR023299 | GO:0000166(InterPro) | |
Cre02g1140 | 835 | SUPERFAMILY | Calcium ATPase, transduction domain A | 267 | 355 | IPR008250 | - | |
Cre02g1140 | 835 | NCBIfam | HAD-IC family P-type ATPase | 269 | 485 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
Cre02g1140 | 835 | NCBIfam | HAD-IC family P-type ATPase | 598 | 772 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
Cre02g1140 | 835 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 199 | 775 | IPR023298 | - | |
Cre02g1140 | 835 | SUPERFAMILY | HAD-like | 460 | 792 | IPR036412 | - | |
Cre02g1140 | 835 | SFLD | Haloacid Dehalogenase | 444 | 745 | - | - | |
Cre02g1140 | 835 | Pfam | E1-E2 ATPase | 266 | 442 | - | - | |
Cre02g1140 | 835 | PRINTS | P-type cation-transporting ATPase superfamily signature | 638 | 648 | - | - | |
Cre02g1140 | 835 | PRINTS | P-type cation-transporting ATPase superfamily signature | 462 | 476 | - | - | |
Cre02g1140 | 835 | PRINTS | P-type cation-transporting ATPase superfamily signature | 692 | 711 | - | - | |
Cre02g1140 | 835 | PRINTS | P-type cation-transporting ATPase superfamily signature | 716 | 728 | - | - | |
Cre02g1140 | 835 | NCBIfam | heavy metal translocating P-type ATPase | 196 | 794 | IPR027256 | GO:0006812(InterPro)|GO:0016020(InterPro)|GO:0019829(InterPro) | |
Cre02g1140 | 835 | MobiDBLite | consensus disorder prediction | 59 | 108 | - | - | |
Cre02g1140 | 835 | Pfam | haloacid dehalogenase-like hydrolase | 460 | 705 | - | - | |
Cre02g1140 | 835 | MobiDBLite | consensus disorder prediction | 73 | 101 | - | - | |
Cre02g1140 | 835 | SFLD | p-type atpase | 444 | 745 | IPR044492 | - | |
Cre02g1140 | 835 | CDD | P-type_ATPase_HM | 140 | 794 | - | - | |
Cre02g1140 | 835 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 464 | 470 | IPR018303 | - | |
Cre02g1140 | 835 | Gene3D | - | 455 | 743 | IPR023214 | - | |
Cre02g1140 | 835 | Gene3D | - | 234 | 360 | - | - | |
Cre02g1140 | 835 | PANTHER | PROBABLE CADMIUM/ZINC-TRANSPORTING ATPASE HMA1 | 58 | 826 | IPR051949 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre02g1082 | Cre-Chr2:9096124 | Cre02g1140 | Cre-Chr2:10378775 | 0.00E+00 | dispersed | |
Cre02g1140 | Cre-Chr2:10378775 | Cre05g1742 | Cre-Chr5:29135965 | 2.10E-48 | dispersed | |
Cre11g1632 | Cre-Chr11:27210333 | Cre02g1140 | Cre-Chr2:10378775 | 3.10E-08 | dispersed | |
Cre02g1140 | Cre-Chr2:10378775 | Cre06g2228 | Cre-Chr6:30154281 | 9.90E-51 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre02g1140 | K01534 | - | mdm:103453726 | 1132.47 |