Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre02g1152 ATGGAATGGGCACTGTCCCATTTGCTCAACAATCCTGATGTGCTAAACAATGCTAGGATTGAGTTGGACTCAATAATTGGACAAGAGCGATTGGTTGATGAATCTGATTTGTCGAAATTGAGTTATTTAGAAGGAGTAATCTATGAAACCTTACGATTAAACCCAGCAGCTCCTTTACTAGTGCCACATTATGCATCTAAAAATTGTTCAATAGCGGGCTACAAAATCCCCCGCGATACGATCGTCTTGATTAATGCTTGGGCAATACATAGAGATCCAAACATATGGGAAGATGCAACTACATTTAACCCCGAAAGACATAAGAACCCCAAGGTAGATGAGTTATTGTACAAACTAATACCTTTCGGTATCGGGCGAAGAGCTTGCCCTGGTGTGGGAATGGCTCATCGTGTAGTTGGCTTGGCCTTGACATCATTGATTCAATGCTTTGAATGGAAGAGGGTGAATAGTGAACTTGTGGACATGGGCGAGGGTGTTGGGCTCACAATGCCTAGAGCTCAACCATTGCAAGCCATGTGTAAATCCCGACCAATCATGAATAGGGTTCTCATTTAA 576 42.71 MEWALSHLLNNPDVLNNARIELDSIIGQERLVDESDLSKLSYLEGVIYETLRLNPAAPLLVPHYASKNCSIAGYKIPRDTIVLINAWAIHRDPNIWEDATTFNPERHKNPKVDELLYKLIPFGIGRRACPGVGMAHRVVGLALTSLIQCFEWKRVNSELVDMGEGVGLTMPRAQPLQAMCKSRPIMNRVLI 191
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 10606533 10607108 - CrPI670011_02g011520.1 Cre02g1152 490433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre02g1152 191 Pfam Cytochrome P450 1 167 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g1152 191 PANTHER CYTOCHROME P450 82C3-RELATED 1 183 IPR050651 -
Cre02g1152 191 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 122 131 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cre02g1152 191 Gene3D Cytochrome P450 1 187 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g1152 191 PRINTS P450 superfamily signature 129 140 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g1152 191 PRINTS P450 superfamily signature 10 23 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g1152 191 PRINTS P450 superfamily signature 120 129 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g1152 191 PRINTS P450 superfamily signature 45 56 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g1152 191 PRINTS E-class P450 group I signature 119 129 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g1152 191 PRINTS E-class P450 group I signature 129 152 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g1152 191 PRINTS E-class P450 group I signature 85 109 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g1152 191 PRINTS E-class P450 group I signature 1 27 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g1152 191 PRINTS E-class P450 group I signature 44 62 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g1152 191 SUPERFAMILY Cytochrome P450 1 183 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g1152 Cre-Chr2:10606533 Cre02g1160 Cre-Chr2:10732512 1.10E-74 dispersed
Cre02g1152 Cre-Chr2:10606533 Cre02g1154 Cre-Chr2:10621279 1.70E-75 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre02g1152 K13260 - csv:101204413 281.567