Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cre02g1154 | ATGGATATTCTCTTCCTTTCCATTTCCTTCTCTATATTCTCTCTCCTTCTTGCCTTGAAGTTTATTCTTCGATCTCATCGCCAAAACCTTCCACCAACCCCATTTCTCTGTCTTCCCATTATCGGTCATCTCCATCTCATCAAACATCCTATCCATAGAACCCTTCACAACCTGTCCAAAAAGTATGGAGATGTCTTCTCTCTCCAATTTGGTTCACGACTTGTCCTAGTTGTATCATCCTCTTCTGTTGTTCAAGAATGTTTTACAAAGAACGATATCATTCTCGCAAATCGGCCCTTATTGGGTACTGGAAAGCACTTGGCATACAACCATACCACCATGGTTGTTGCCCCTTACGGTGATCACTGGAGAAACCTACGTCGAATTGGCGCCCTCGAGATTTTTTCGACGAGTCGTGTAAATCTATTCTCGAGAATTCGAGAGGAGGAAGTTAAAGGGTTGATGGTTAGATTATGTGGGAGTTCGTGGGAAGAATTCACACTAGTGGAGCCGGAGAGTATGTTTTTAGATCTTATGTATAATATTATTGTGAGAATGGTGGGTGGGAAGAAGCCTCATGAAGAGAATAAGGGAAAATCAAGGGAATTTAGAGAGGTGGTGACAAAGATTATGGAGGTTGGTGGGACAACAAATCCAGGGGACTTCATACCCATTTGGAATTGGATTGATCCGAGTGGCTTGGAGAAGAAGATCATAAAACTTGGACAAACAATGGATGAACTTCTTCAAGATTTAGTTGATGGGATAAGAAATCAGAATGGTGTAGGGAACGCTATGATTCATCGTTTACTTCATTTGCAGAAAACTGAGCCTGAGAATCATAGTGACCAAATTATCAAAGGCCTGATACAAATCATATTAGTAGCAGGAATTGACACAACTGCCGTAACCTTAGAATGGGCACTCTCTCATCTACTCAACAATCCAGATGTGTTGGAGAAAGCAAAAGGTGAGATAGACAGTGCCATTGGACAAGAGCGTCTAGTCAATGAAGTTGATTTGCCAAGTTTGAATTATCTACAAGGAATAATTTCCGAAACTCTTCGATTGAACCCAGCAGCTCCTTTGCTTGTTCCTCATTGCGCTTCAGAAGATTGTAAAATTGGAGGCTATGATGTACCACGTGACACAATTGTATTGATTAATGCGTGGGCTATCCATAGAGATCCCAACCAATGGGAAGATGCCACAAATTTTAATCCCGAAAGACATACGAATCCTATTGGAGTTGACTCGTATAAATTATTACCATTTGGATTGGGGAGGAGAGCCTGTCCTGGAATAGGAATAGCTCAACGAATGGCTACCTTGACTTTGGCAAACATGATTCAATGCTTTGAGTGGGAAAGAGAAGGCACTTCATTGGTTGACATGAGTGAAGGTGAAGGAATTACTATGCCCAAAGCTCAACGATTGGTAGCCAAGTGCAAACCGCGTCCAATCATGAAAGCTATTTTTAGAGAAGTTGTCTCAAAATAA | 1500 | 41.4 | MDILFLSISFSIFSLLLALKFILRSHRQNLPPTPFLCLPIIGHLHLIKHPIHRTLHNLSKKYGDVFSLQFGSRLVLVVSSSSVVQECFTKNDIILANRPLLGTGKHLAYNHTTMVVAPYGDHWRNLRRIGALEIFSTSRVNLFSRIREEEVKGLMVRLCGSSWEEFTLVEPESMFLDLMYNIIVRMVGGKKPHEENKGKSREFREVVTKIMEVGGTTNPGDFIPIWNWIDPSGLEKKIIKLGQTMDELLQDLVDGIRNQNGVGNAMIHRLLHLQKTEPENHSDQIIKGLIQIILVAGIDTTAVTLEWALSHLLNNPDVLEKAKGEIDSAIGQERLVNEVDLPSLNYLQGIISETLRLNPAAPLLVPHCASEDCKIGGYDVPRDTIVLINAWAIHRDPNQWEDATNFNPERHTNPIGVDSYKLLPFGLGRRACPGIGIAQRMATLTLANMIQCFEWEREGTSLVDMSEGEGITMPKAQRLVAKCKPRPIMKAIFREVVSK | 499 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 10621279 | 10623670 | - | CrPI670011_02g011540.1 | Cre02g1154 | 490435 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cre02g1154 | 499 | PANTHER | CYTOCHROME P450 82C3-RELATED | 16 | 486 | IPR050651 | - | |
| Cre02g1154 | 499 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 425 | 434 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cre02g1154 | 499 | PRINTS | E-class P450 group I signature | 432 | 455 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre02g1154 | 499 | PRINTS | E-class P450 group I signature | 305 | 331 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre02g1154 | 499 | PRINTS | E-class P450 group I signature | 422 | 432 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre02g1154 | 499 | PRINTS | E-class P450 group I signature | 59 | 78 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre02g1154 | 499 | PRINTS | E-class P450 group I signature | 285 | 302 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre02g1154 | 499 | PRINTS | E-class P450 group I signature | 389 | 413 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre02g1154 | 499 | PRINTS | E-class P450 group I signature | 83 | 104 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre02g1154 | 499 | PRINTS | E-class P450 group I signature | 348 | 366 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre02g1154 | 499 | PRINTS | E-class P450 group I signature | 178 | 196 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre02g1154 | 499 | FunFam | Cytochrome P450 family protein | 22 | 489 | - | - | |
| Cre02g1154 | 499 | Gene3D | Cytochrome P450 | 22 | 489 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre02g1154 | 499 | SUPERFAMILY | Cytochrome P450 | 31 | 486 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre02g1154 | 499 | CDD | CYP81 | 63 | 479 | - | - | |
| Cre02g1154 | 499 | PRINTS | P450 superfamily signature | 423 | 432 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre02g1154 | 499 | PRINTS | P450 superfamily signature | 296 | 313 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre02g1154 | 499 | PRINTS | P450 superfamily signature | 349 | 360 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre02g1154 | 499 | Pfam | Cytochrome P450 | 32 | 476 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cre02g1154 | Cre-Chr2:10621279 | Cre02g1162 | Cre-Chr2:10755380 | 7.10E-198 | dispersed | |
| Cre02g1152 | Cre-Chr2:10606533 | Cre02g1154 | Cre-Chr2:10621279 | 1.70E-75 | proximal | |
| Cre02g1154 | Cre-Chr2:10621279 | Cre02g1156 | Cre-Chr2:10661679 | 4.10E-84 | proximal | |
| Cre02g1153 | Cre-Chr2:10608981 | Cre02g1154 | Cre-Chr2:10621279 | 2.90E-53 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cre02g1154 | K13260 | - | csv:101204413 | 821.617 |