Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cre02g1154 ATGGATATTCTCTTCCTTTCCATTTCCTTCTCTATATTCTCTCTCCTTCTTGCCTTGAAGTTTATTCTTCGATCTCATCGCCAAAACCTTCCACCAACCCCATTTCTCTGTCTTCCCATTATCGGTCATCTCCATCTCATCAAACATCCTATCCATAGAACCCTTCACAACCTGTCCAAAAAGTATGGAGATGTCTTCTCTCTCCAATTTGGTTCACGACTTGTCCTAGTTGTATCATCCTCTTCTGTTGTTCAAGAATGTTTTACAAAGAACGATATCATTCTCGCAAATCGGCCCTTATTGGGTACTGGAAAGCACTTGGCATACAACCATACCACCATGGTTGTTGCCCCTTACGGTGATCACTGGAGAAACCTACGTCGAATTGGCGCCCTCGAGATTTTTTCGACGAGTCGTGTAAATCTATTCTCGAGAATTCGAGAGGAGGAAGTTAAAGGGTTGATGGTTAGATTATGTGGGAGTTCGTGGGAAGAATTCACACTAGTGGAGCCGGAGAGTATGTTTTTAGATCTTATGTATAATATTATTGTGAGAATGGTGGGTGGGAAGAAGCCTCATGAAGAGAATAAGGGAAAATCAAGGGAATTTAGAGAGGTGGTGACAAAGATTATGGAGGTTGGTGGGACAACAAATCCAGGGGACTTCATACCCATTTGGAATTGGATTGATCCGAGTGGCTTGGAGAAGAAGATCATAAAACTTGGACAAACAATGGATGAACTTCTTCAAGATTTAGTTGATGGGATAAGAAATCAGAATGGTGTAGGGAACGCTATGATTCATCGTTTACTTCATTTGCAGAAAACTGAGCCTGAGAATCATAGTGACCAAATTATCAAAGGCCTGATACAAATCATATTAGTAGCAGGAATTGACACAACTGCCGTAACCTTAGAATGGGCACTCTCTCATCTACTCAACAATCCAGATGTGTTGGAGAAAGCAAAAGGTGAGATAGACAGTGCCATTGGACAAGAGCGTCTAGTCAATGAAGTTGATTTGCCAAGTTTGAATTATCTACAAGGAATAATTTCCGAAACTCTTCGATTGAACCCAGCAGCTCCTTTGCTTGTTCCTCATTGCGCTTCAGAAGATTGTAAAATTGGAGGCTATGATGTACCACGTGACACAATTGTATTGATTAATGCGTGGGCTATCCATAGAGATCCCAACCAATGGGAAGATGCCACAAATTTTAATCCCGAAAGACATACGAATCCTATTGGAGTTGACTCGTATAAATTATTACCATTTGGATTGGGGAGGAGAGCCTGTCCTGGAATAGGAATAGCTCAACGAATGGCTACCTTGACTTTGGCAAACATGATTCAATGCTTTGAGTGGGAAAGAGAAGGCACTTCATTGGTTGACATGAGTGAAGGTGAAGGAATTACTATGCCCAAAGCTCAACGATTGGTAGCCAAGTGCAAACCGCGTCCAATCATGAAAGCTATTTTTAGAGAAGTTGTCTCAAAATAA 1500 41.4 MDILFLSISFSIFSLLLALKFILRSHRQNLPPTPFLCLPIIGHLHLIKHPIHRTLHNLSKKYGDVFSLQFGSRLVLVVSSSSVVQECFTKNDIILANRPLLGTGKHLAYNHTTMVVAPYGDHWRNLRRIGALEIFSTSRVNLFSRIREEEVKGLMVRLCGSSWEEFTLVEPESMFLDLMYNIIVRMVGGKKPHEENKGKSREFREVVTKIMEVGGTTNPGDFIPIWNWIDPSGLEKKIIKLGQTMDELLQDLVDGIRNQNGVGNAMIHRLLHLQKTEPENHSDQIIKGLIQIILVAGIDTTAVTLEWALSHLLNNPDVLEKAKGEIDSAIGQERLVNEVDLPSLNYLQGIISETLRLNPAAPLLVPHCASEDCKIGGYDVPRDTIVLINAWAIHRDPNQWEDATNFNPERHTNPIGVDSYKLLPFGLGRRACPGIGIAQRMATLTLANMIQCFEWEREGTSLVDMSEGEGITMPKAQRLVAKCKPRPIMKAIFREVVSK 499
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
2 10621279 10623670 - CrPI670011_02g011540.1 Cre02g1154 490435
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cre02g1154 499 PANTHER CYTOCHROME P450 82C3-RELATED 16 486 IPR050651 -
Cre02g1154 499 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 425 434 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cre02g1154 499 PRINTS E-class P450 group I signature 432 455 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g1154 499 PRINTS E-class P450 group I signature 305 331 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g1154 499 PRINTS E-class P450 group I signature 422 432 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g1154 499 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g1154 499 PRINTS E-class P450 group I signature 285 302 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g1154 499 PRINTS E-class P450 group I signature 389 413 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g1154 499 PRINTS E-class P450 group I signature 83 104 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g1154 499 PRINTS E-class P450 group I signature 348 366 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g1154 499 PRINTS E-class P450 group I signature 178 196 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g1154 499 FunFam Cytochrome P450 family protein 22 489 - -
Cre02g1154 499 Gene3D Cytochrome P450 22 489 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g1154 499 SUPERFAMILY Cytochrome P450 31 486 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g1154 499 CDD CYP81 63 479 - -
Cre02g1154 499 PRINTS P450 superfamily signature 423 432 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g1154 499 PRINTS P450 superfamily signature 296 313 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g1154 499 PRINTS P450 superfamily signature 349 360 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g1154 499 Pfam Cytochrome P450 32 476 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g1154 Cre-Chr2:10621279 Cre02g1162 Cre-Chr2:10755380 7.10E-198 dispersed
Cre02g1152 Cre-Chr2:10606533 Cre02g1154 Cre-Chr2:10621279 1.70E-75 proximal
Cre02g1154 Cre-Chr2:10621279 Cre02g1156 Cre-Chr2:10661679 4.10E-84 proximal
Cre02g1153 Cre-Chr2:10608981 Cre02g1154 Cre-Chr2:10621279 2.90E-53 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre02g1154 K13260 - csv:101204413 821.617