Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre02g1156 ATGCATGTTATACTTTTAGCAGGAATCGATACAACAGCCGTGACATTAGAATGGGCACTCTCACACTTGCTCAACAATCCAGAGGTGATAAAGAAAGCGAGACTTGAAATAGAGTGTTGTACTGGACAAAAACGTCTAGTCAATGAAGAGGATTTGTCAAGTTTGAGTTATTTGCAAGGAATAATCTTAGAAACTTTGCGACTAACCCCAGCAGCCCCTCTGCTTGTGCCACATTGCGCATCCAAAGATTGCCAAATAGAAGGCTATGATATACCACGTGACACAATTATATTTGTTAATGCTTGGGCAATACATAGAGATCCAAATCTATGGGAAGATGTCACTAGTTTTAAGCCTGAGAGGCATGAAAATGTAATTGAATTATCTGATTCATACAAACTATTACCATTTGGGTTGGGGAGGAGGGCATGTCCTGGTGTAGGAATGGCGCAACGTGTGGTTGGCTTGACATTGGCATCGTTGATTCAATGCTTTGATTGGGAAAGAATGAATAGCTCATTAGTTGATATGAGTGAAGGCCAAGGGATCACTATGCCAAAAGCTCAACCTTTGGTAGCCAAGTGGCTTATTCCAGATCCGGAGAACAGAGCAGCAGCAAGACTTGCGGATGTTATGGGGTCTCGAAGACGGAATTTCGCTGCCAACCCTAGTAAGTAG 678 42.63 MHVILLAGIDTTAVTLEWALSHLLNNPEVIKKARLEIECCTGQKRLVNEEDLSSLSYLQGIILETLRLTPAAPLLVPHCASKDCQIEGYDIPRDTIIFVNAWAIHRDPNLWEDVTSFKPERHENVIELSDSYKLLPFGLGRRACPGVGMAQRVVGLTLASLIQCFDWERMNSSLVDMSEGQGITMPKAQPLVAKWLIPDPENRAAARLADVMGSRRRNFAANPSK 225
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 10661679 10663713 + CrPI670011_02g011560.1 Cre02g1156 490437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre02g1156 225 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 4 194 IPR051103 GO:0016020(PANTHER)|GO:0016709(PANTHER)
Cre02g1156 225 Gene3D Cytochrome P450 1 195 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g1156 225 PRINTS E-class P450 group I signature 144 167 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g1156 225 PRINTS E-class P450 group I signature 59 77 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g1156 225 PRINTS E-class P450 group I signature 134 144 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g1156 225 PRINTS E-class P450 group I signature 100 124 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g1156 225 PRINTS E-class P450 group I signature 16 42 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g1156 225 PRINTS P450 superfamily signature 60 71 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g1156 225 PRINTS P450 superfamily signature 7 24 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g1156 225 PRINTS P450 superfamily signature 144 155 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g1156 225 PRINTS P450 superfamily signature 135 144 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g1156 225 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 137 146 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cre02g1156 225 Pfam Cytochrome P450 3 188 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g1156 225 SUPERFAMILY Cytochrome P450 3 194 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g1156 Cre-Chr2:10661679 Cre02g1159 Cre-Chr2:10683043 5.70E-86 dispersed
Cre02g1154 Cre-Chr2:10621279 Cre02g1156 Cre-Chr2:10661679 4.10E-84 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre02g1156 K13260 - csv:105434396 357.451