Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre02g1158 ATGCATCCCGATGATCAGCAGCAGCAGCCGTTGATAGAGGAGGAAGAGGAAGAAACTGCTTACGACTTGACGGAGAAGGTTGTGGTAATTGGGATCCACGAACCGGAGTCTGATTCGGACGTGGGTTTGCTGCCGTTTTCATGGAGGAAGCTCTGGCTGTTCACAGGGCCTGGGTTTTTGATGAGCATAGCGTTTCTAGATCCTGGGAATTTGGAGTCCAATCTTCAGGCTGGTGCTATAGCTGGGTATTCTTTGTTGTGGCTTCTGTTGTGGGCTACGGCCATGGGGCTTTTGATCCAGTTGCTTTCGGCTAGGCTTGGCGTTGCCACTGGCAGGCACTTGGCCGAGCTATGTAGAGAAGAGTACCCAACTTGGGCGAGGATTGTGCTGTGGGTCATGGCGGAGTTCGCCCTAATTGGGGCTGATATACAGGAAGTCATTGGGAGTGCTATTGCTATTAAGATTCTGAGTAACGGGGCTTTGCCTCTCTGGGTTGGAGTCATCATCACTGCTTTAGATTGTTTTATCTTCCTGTTTCTTGAGAATTATGGTGTGAGGAAACTGGAGGCTGTTTTTGCTGTTCTCATTGCTACAATGGCAATCTCATTTGCTTGGATGTTTGGTGAAACTAAGCCAGATGGGAAGGAGCTTCTATTGGGTATTTTGATTCCGAAACTTAGCTCCAAGACAATTAAACAGGCTGTTGCTGTTGTGGGGTGTATCATCATGCCTCATAATGTGTTTTTGCACTCTGCTCTTGTGCAGTCGCGAGATATTGATCCGAGTAAGAAAGGGCGGGTCCGGGAAGCTCTAAGATACTACTCCATTGAGTCCACTCTTGCCCTTTTTGTCTCCTTCATCATCAACTTGTTTGTTACAACTGTGTTTGCTAAAGCCTTCTATGGTACAGACATAGCGAATAGCATTGGTCTTGTAAATGCAGGCCAATATCTTCAAGATAAATATGGTGGAGGGCTTTTCCCCATTCTGTACATCTGGGCTATTGGTTTATTAGCTGCTGGCCAAAGTAGCACCATCACTGGTACCTATGCAGGACAGTTTATCATGAGTGGATTCCTGAACTTGAAGTTGAAAAAATGGCTAAGAGCTTTGATAACTAGAAGCTTTGCAATCATTCCAACTATGATTGTTGCACTTGTGTTTGAAACTTCTGACTCGATGGTTGATGTTCTGAATGAATGGCTCAATGTCCTCCAGTCCATTCAGATTCCCTTTGCTCTGATTCCTCTTCTCTGTTTGGCTTCGAAGGAAAATCTAATGGGTAGTTTCAGAATTGGCCCCGTTTTAAAGACAATCTCTTGGCTGGTGGCAGTCTTGGTGATGGCCATCAACGGGTATCTTTTGGTGAGCTTCTTCTCATCGGAAGTGAACGGAGTGCTCGTTGCCATTTTCGTATTTGTCTTCATCGCTGCATATCTTGCCTTTGTTGTCTACCTCGTCTATCAAAGCATTTCGTTTTCAAGTTGGCACAACTTCATTAACCGGAAGACTTACACGGCCAATGGAAACTGA 1533 45.66 MHPDDQQQQPLIEEEEEETAYDLTEKVVVIGIHEPESDSDVGLLPFSWRKLWLFTGPGFLMSIAFLDPGNLESNLQAGAIAGYSLLWLLLWATAMGLLIQLLSARLGVATGRHLAELCREEYPTWARIVLWVMAEFALIGADIQEVIGSAIAIKILSNGALPLWVGVIITALDCFIFLFLENYGVRKLEAVFAVLIATMAISFAWMFGETKPDGKELLLGILIPKLSSKTIKQAVAVVGCIIMPHNVFLHSALVQSRDIDPSKKGRVREALRYYSIESTLALFVSFIINLFVTTVFAKAFYGTDIANSIGLVNAGQYLQDKYGGGLFPILYIWAIGLLAAGQSSTITGTYAGQFIMSGFLNLKLKKWLRALITRSFAIIPTMIVALVFETSDSMVDVLNEWLNVLQSIQIPFALIPLLCLASKENLMGSFRIGPVLKTISWLVAVLVMAINGYLLVSFFSSEVNGVLVAIFVFVFIAAYLAFVVYLVYQSISFSSWHNFINRKTYTANGN 510
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 10674685 10677039 + CrPI670011_02g011580.1 Cre02g1158 490439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre02g1158 510 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 24 492 IPR001046 GO:0005384(PANTHER)|GO:0005774(PANTHER)|GO:0015086(PANTHER)|GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0042742(PANTHER)|GO:0046873(InterPro)|GO:0055072(PANTHER)|GO:2000379(PANTHER)
Cre02g1158 510 NCBIfam Nramp family divalent metal transporter 56 425 - -
Cre02g1158 510 Hamap Divalent metal cation transporter MntH [mntH]. 37 459 IPR001046 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)
Cre02g1158 510 PRINTS Natural resistance-associated macrophage protein signature 234 257 IPR001046 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)
Cre02g1158 510 PRINTS Natural resistance-associated macrophage protein signature 130 156 IPR001046 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)
Cre02g1158 510 PRINTS Natural resistance-associated macrophage protein signature 185 206 IPR001046 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)
Cre02g1158 510 PRINTS Natural resistance-associated macrophage protein signature 341 360 IPR001046 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)
Cre02g1158 510 PRINTS Natural resistance-associated macrophage protein signature 403 422 IPR001046 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)
Cre02g1158 510 PRINTS Natural resistance-associated macrophage protein signature 160 179 IPR001046 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)
Cre02g1158 510 PRINTS Natural resistance-associated macrophage protein signature 369 386 IPR001046 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)
Cre02g1158 510 Pfam Natural resistance-associated macrophage protein-like 72 433 IPR001046 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)
Cre02g1158 510 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 49 427 IPR001046 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g1158 Cre-Chr2:10674685 Cre10g1445 Cre-Chr10:28262830 2.30E-90 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre02g1158 K21398 - csv:101211711 923.694