Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cre02g1159 ATGGATATTCTCTTACTTTCTATTTCTTTCTTTCTATTGTCTGTCATCTTTGCCTTCAACTTTCTGCTGCGACCTCATCGCCTAAACCTCCCACCAACCCCACCTTTTTGTCTTCCATTCATAGGCCATTTTCATCTCCTCAAACATCCTTTGCATCAAACCCTTCAAAACCTCTCCCAAAAATATGGCCATGTCATGTCTCTCCGATTCGGTTCCCGTCTTGTCGTAGTTGTTTCATCTCCCTCTGCCGTGAAAGAATGCTTTACAAAGAACGATATCATTCTTGCAAATCGGCCTTTGGTGAACACTACAAAGTACTTCGCATACAACCAAACCACTATGGGGGTCTCCCCTTACGGTGAACATTGGCGAAATCTCCGTCGAATCGGCTCACTCAAGATTTTCTCAACAAATCGCCTCAATTTGTTCTTGGGAATTCGGGAAGATGAAGTTAAACGTTTGCTATGTAAATTATGTGGTAATTGTTATAAGTTGGAAGATGAGTTTAGAGTAGTGGAATTGGAGCCTATGTTGCAAGATCTTATATTGAATATTGTTATGAGAATGGTGTGTGGGAAGAAGTTTTATGAAGAAGATTATTCTAGCAAGTTTAGAGATATTGTGACACAAATTCTGGCACATGGTGGGACCACAAATCTGGGAGACTTCATACCCTTATGGAATTGGATTGATCCAACTGGTTTTATGAAGAGGGTAAAGAAGATTGCAAAGACATCAGATGAATTTCTTCAACAGTTAATTGATGAGATTAGGAACCAAAATGATGGAGGGGACACTATGATTCACCATTTACTTAGTTTGCAGAATATTGAACCTCAATATTACAACGATCAAACTATCAAAGGACTCATTCAAGATATATTTTTAGCTGGGATAGACACGATAGCTTTGACTTTGGAGTGGGCACTATCTCACTTGCTCAACAACCCAGAGGTGTTAAAGAAGGCAAAAGTTGAGATAGATTGTTCGATTGGGCAAGAACGTGTAGTTAATGAAGCTGATGTACCAAGTTTGAGTTACCTTCAAGGAATAATCACCGAGACTTTGCGTCTTAACCCACCTGCTCCTCTGCTTGTGCCACACTGTGCATTATTTGAAGAGTGCAAAATAGAAGGATATGATGTTCCACGTGATACAATTATATTGATTAATGCTTGGGCTATCCATAGAGATCCAAGTCTTTGGGAAGATGCAACCAGCTTTAAACCTGAAAGACATGCAAGCGGGATTGAAGCTTCAGAGTCATATAAACTAATACCATTTGGAGCGGGGAGGAGAGCATGTCCTGGTGTGGGAATGGCGAAACGTGTGGTTGCCTTGACTTTAGCGTCATTGATACAAAGCTTTGAATGGGAAAGAGTTAACGACTCATTAATTGATATGAGTGAAGGTAAAGGGCTCACAATGCCCAAAGCTCAACCATTGGTAGCTAAGTGTAAACCATACCCAATCGTGAAAGCCATCCTGAAAGCACGTATCAATTGCTAA 1509 40.49 MDILLLSISFFLLSVIFAFNFLLRPHRLNLPPTPPFCLPFIGHFHLLKHPLHQTLQNLSQKYGHVMSLRFGSRLVVVVSSPSAVKECFTKNDIILANRPLVNTTKYFAYNQTTMGVSPYGEHWRNLRRIGSLKIFSTNRLNLFLGIREDEVKRLLCKLCGNCYKLEDEFRVVELEPMLQDLILNIVMRMVCGKKFYEEDYSSKFRDIVTQILAHGGTTNLGDFIPLWNWIDPTGFMKRVKKIAKTSDEFLQQLIDEIRNQNDGGDTMIHHLLSLQNIEPQYYNDQTIKGLIQDIFLAGIDTIALTLEWALSHLLNNPEVLKKAKVEIDCSIGQERVVNEADVPSLSYLQGIITETLRLNPPAPLLVPHCALFEECKIEGYDVPRDTIILINAWAIHRDPSLWEDATSFKPERHASGIEASESYKLIPFGAGRRACPGVGMAKRVVALTLASLIQSFEWERVNDSLIDMSEGKGLTMPKAQPLVAKCKPYPIVKAILKARINC 502
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
2 10683043 10685673 - CrPI670011_02g011590.1 Cre02g1159 490440
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cre02g1159 502 FunFam Cytochrome P450 family protein 22 492 - -
Cre02g1159 502 PRINTS P450 superfamily signature 426 435 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g1159 502 PRINTS P450 superfamily signature 435 446 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g1159 502 PRINTS P450 superfamily signature 297 314 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g1159 502 PRINTS P450 superfamily signature 350 361 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g1159 502 PANTHER CYTOCHROME P450 82C3-RELATED 14 488 IPR050651 -
Cre02g1159 502 CDD CYP81 63 482 - -
Cre02g1159 502 Gene3D Cytochrome P450 23 489 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g1159 502 Pfam Cytochrome P450 32 479 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g1159 502 PRINTS E-class P450 group I signature 391 415 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g1159 502 PRINTS E-class P450 group I signature 425 435 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g1159 502 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g1159 502 PRINTS E-class P450 group I signature 306 332 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g1159 502 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g1159 502 PRINTS E-class P450 group I signature 83 104 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g1159 502 PRINTS E-class P450 group I signature 435 458 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g1159 502 PRINTS E-class P450 group I signature 349 367 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g1159 502 PRINTS E-class P450 group I signature 286 303 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g1159 502 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 428 437 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cre02g1159 502 SUPERFAMILY Cytochrome P450 31 488 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g1153 Cre-Chr2:10608981 Cre02g1159 Cre-Chr2:10683043 6.80E-63 dispersed
Cre02g1156 Cre-Chr2:10661679 Cre02g1159 Cre-Chr2:10683043 5.70E-86 dispersed
Cre02g1159 Cre-Chr2:10683043 Cre02g1162 Cre-Chr2:10755380 2.50E-206 dispersed
Cre02g1159 Cre-Chr2:10683043 Cre02g1160 Cre-Chr2:10732512 4.10E-201 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre02g1159 K13260 - csv:101205626 704.901