Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cre02g1159 | ATGGATATTCTCTTACTTTCTATTTCTTTCTTTCTATTGTCTGTCATCTTTGCCTTCAACTTTCTGCTGCGACCTCATCGCCTAAACCTCCCACCAACCCCACCTTTTTGTCTTCCATTCATAGGCCATTTTCATCTCCTCAAACATCCTTTGCATCAAACCCTTCAAAACCTCTCCCAAAAATATGGCCATGTCATGTCTCTCCGATTCGGTTCCCGTCTTGTCGTAGTTGTTTCATCTCCCTCTGCCGTGAAAGAATGCTTTACAAAGAACGATATCATTCTTGCAAATCGGCCTTTGGTGAACACTACAAAGTACTTCGCATACAACCAAACCACTATGGGGGTCTCCCCTTACGGTGAACATTGGCGAAATCTCCGTCGAATCGGCTCACTCAAGATTTTCTCAACAAATCGCCTCAATTTGTTCTTGGGAATTCGGGAAGATGAAGTTAAACGTTTGCTATGTAAATTATGTGGTAATTGTTATAAGTTGGAAGATGAGTTTAGAGTAGTGGAATTGGAGCCTATGTTGCAAGATCTTATATTGAATATTGTTATGAGAATGGTGTGTGGGAAGAAGTTTTATGAAGAAGATTATTCTAGCAAGTTTAGAGATATTGTGACACAAATTCTGGCACATGGTGGGACCACAAATCTGGGAGACTTCATACCCTTATGGAATTGGATTGATCCAACTGGTTTTATGAAGAGGGTAAAGAAGATTGCAAAGACATCAGATGAATTTCTTCAACAGTTAATTGATGAGATTAGGAACCAAAATGATGGAGGGGACACTATGATTCACCATTTACTTAGTTTGCAGAATATTGAACCTCAATATTACAACGATCAAACTATCAAAGGACTCATTCAAGATATATTTTTAGCTGGGATAGACACGATAGCTTTGACTTTGGAGTGGGCACTATCTCACTTGCTCAACAACCCAGAGGTGTTAAAGAAGGCAAAAGTTGAGATAGATTGTTCGATTGGGCAAGAACGTGTAGTTAATGAAGCTGATGTACCAAGTTTGAGTTACCTTCAAGGAATAATCACCGAGACTTTGCGTCTTAACCCACCTGCTCCTCTGCTTGTGCCACACTGTGCATTATTTGAAGAGTGCAAAATAGAAGGATATGATGTTCCACGTGATACAATTATATTGATTAATGCTTGGGCTATCCATAGAGATCCAAGTCTTTGGGAAGATGCAACCAGCTTTAAACCTGAAAGACATGCAAGCGGGATTGAAGCTTCAGAGTCATATAAACTAATACCATTTGGAGCGGGGAGGAGAGCATGTCCTGGTGTGGGAATGGCGAAACGTGTGGTTGCCTTGACTTTAGCGTCATTGATACAAAGCTTTGAATGGGAAAGAGTTAACGACTCATTAATTGATATGAGTGAAGGTAAAGGGCTCACAATGCCCAAAGCTCAACCATTGGTAGCTAAGTGTAAACCATACCCAATCGTGAAAGCCATCCTGAAAGCACGTATCAATTGCTAA | 1509 | 40.49 | MDILLLSISFFLLSVIFAFNFLLRPHRLNLPPTPPFCLPFIGHFHLLKHPLHQTLQNLSQKYGHVMSLRFGSRLVVVVSSPSAVKECFTKNDIILANRPLVNTTKYFAYNQTTMGVSPYGEHWRNLRRIGSLKIFSTNRLNLFLGIREDEVKRLLCKLCGNCYKLEDEFRVVELEPMLQDLILNIVMRMVCGKKFYEEDYSSKFRDIVTQILAHGGTTNLGDFIPLWNWIDPTGFMKRVKKIAKTSDEFLQQLIDEIRNQNDGGDTMIHHLLSLQNIEPQYYNDQTIKGLIQDIFLAGIDTIALTLEWALSHLLNNPEVLKKAKVEIDCSIGQERVVNEADVPSLSYLQGIITETLRLNPPAPLLVPHCALFEECKIEGYDVPRDTIILINAWAIHRDPSLWEDATSFKPERHASGIEASESYKLIPFGAGRRACPGVGMAKRVVALTLASLIQSFEWERVNDSLIDMSEGKGLTMPKAQPLVAKCKPYPIVKAILKARINC | 502 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 10683043 | 10685673 | - | CrPI670011_02g011590.1 | Cre02g1159 | 490440 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cre02g1159 | 502 | FunFam | Cytochrome P450 family protein | 22 | 492 | - | - | |
| Cre02g1159 | 502 | PRINTS | P450 superfamily signature | 426 | 435 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre02g1159 | 502 | PRINTS | P450 superfamily signature | 435 | 446 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre02g1159 | 502 | PRINTS | P450 superfamily signature | 297 | 314 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre02g1159 | 502 | PRINTS | P450 superfamily signature | 350 | 361 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre02g1159 | 502 | PANTHER | CYTOCHROME P450 82C3-RELATED | 14 | 488 | IPR050651 | - | |
| Cre02g1159 | 502 | CDD | CYP81 | 63 | 482 | - | - | |
| Cre02g1159 | 502 | Gene3D | Cytochrome P450 | 23 | 489 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre02g1159 | 502 | Pfam | Cytochrome P450 | 32 | 479 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre02g1159 | 502 | PRINTS | E-class P450 group I signature | 391 | 415 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre02g1159 | 502 | PRINTS | E-class P450 group I signature | 425 | 435 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre02g1159 | 502 | PRINTS | E-class P450 group I signature | 181 | 199 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre02g1159 | 502 | PRINTS | E-class P450 group I signature | 306 | 332 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre02g1159 | 502 | PRINTS | E-class P450 group I signature | 59 | 78 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre02g1159 | 502 | PRINTS | E-class P450 group I signature | 83 | 104 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre02g1159 | 502 | PRINTS | E-class P450 group I signature | 435 | 458 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre02g1159 | 502 | PRINTS | E-class P450 group I signature | 349 | 367 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre02g1159 | 502 | PRINTS | E-class P450 group I signature | 286 | 303 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre02g1159 | 502 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 428 | 437 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cre02g1159 | 502 | SUPERFAMILY | Cytochrome P450 | 31 | 488 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cre02g1153 | Cre-Chr2:10608981 | Cre02g1159 | Cre-Chr2:10683043 | 6.80E-63 | dispersed | |
| Cre02g1156 | Cre-Chr2:10661679 | Cre02g1159 | Cre-Chr2:10683043 | 5.70E-86 | dispersed | |
| Cre02g1159 | Cre-Chr2:10683043 | Cre02g1162 | Cre-Chr2:10755380 | 2.50E-206 | dispersed | |
| Cre02g1159 | Cre-Chr2:10683043 | Cre02g1160 | Cre-Chr2:10732512 | 4.10E-201 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cre02g1159 | K13260 | - | csv:101205626 | 704.901 |