Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cre02g1160 | ATGGATCTTCTTTTGCTCTCTCTTTCTCTAATCTCTCTATTCTCTCTTCTCCTTGCCTTCAACTTCTTCCAGCAACCTCATCACAAAAACCTCCCACCAACTCCATCTTTTTCTCTTCCATTAATAGGCCATCTCCATCTCCTCAAACATCCTGTCCATCAAACACTTCAAAGCCTCTCCCAAAAGCATGGCCGTGTCTTTTCTCTCCGATTCGGCTCACGTCTTGTCGTAGTTGTATCCTCTTCTTCTCTTGTCCAAGAATGCTTTACAAAGAACGATGTGATTCTTGCCAATCGCCCATTGTTCAAGAGTTCGAAGTACTTAACCTACAACTATACCAACTTAGCCATCTCTCCTTATGGAGAACATTGGCGAAACCTCCGCCGAATCAGCACCCTTGAGATTTTCTCCACAAGTCGCCTTAATCTTTTCAGGGGAATTAGGGAAGATGAAGTCAAACGGTTGTTGTGTAAATTGTGGGATAAATATTCGTTTGAAGAGTTTAAGGTAGTGGAGATGGGGCCAATATTTATGGATCTTATGTTCAATATTGTTATGAGAATGATGGGGGGAAAGAAGTATTGTGGTGATGATTTGGAAGATGAGGAACGATCCAAGAAATTTAAAGAGATGGTGACACAAGTTCTTGCAATTAGTGCAATGGGAAATCCAGGAGATGTTATACCTTTATGGAATTGGATTGATCCAACTTGTTATGAGAAAAGGGTAAAAAAGCTTGCAAAGACATCAGATGAACTTCTTCAAAAACTAATTGATGAGATTAGGAATCAAAATGATGGAGAAAACACCATGATTCAACATTTACTTGGTTTGCAGAATACCCAACCTGAATGTTATAGTGACCAAATTATCAAAGGCCTCGTACAAGTAGCATTTTTAGCAGGAATAGACACAATTGTAGTGACCTTAGAATGGGCACTATCTCAATTGCTCAATAATTCAGAGGTGTTGAAGAAAGCTAGAGATGAGATAGATAGTTCCATTGGGCAAGATCGTTTTGTTAACGAAGCTGATTTGTCGAGTTTGAGTTACTTGGAAGGAATAATCTCTGAGACCCTACGATTGAACCCAGCCGCTCCCCTTCTGCTGCCACATTGTGCCTCTGAAGACTGCAAAATAGGAGGCTACGATGTACCACGTGACACGATGGTATTAATCAATGCTTGGGCCATACATAGAGACTCAAGTCTATGGGAAGATGCCACAAGTTTCAAGCCAGAAAGACATGAAAATGCAATTGGAGTTGATTTGTACAAACTATTACCATTTGGGTTGGGAAGGAGAGCTTGCCCTGGAATGGGAATGGCACAACGTGTAATTGCATTGACTCTGGCGTCGTTGATTCAATGCTTTGAGTGGCAAAGACTCAGCAACTCATTGGTGGACATGACAGAAGGCCAAGGACTCACTATGCCGAAAGCTCAACCATTGACAGCCAAGTGTAGACCTCGTTCAATCATGAAAAAACTATTGCCAATGAAACAATAA | 1509 | 41.15 | MDLLLLSLSLISLFSLLLAFNFFQQPHHKNLPPTPSFSLPLIGHLHLLKHPVHQTLQSLSQKHGRVFSLRFGSRLVVVVSSSSLVQECFTKNDVILANRPLFKSSKYLTYNYTNLAISPYGEHWRNLRRISTLEIFSTSRLNLFRGIREDEVKRLLCKLWDKYSFEEFKVVEMGPIFMDLMFNIVMRMMGGKKYCGDDLEDEERSKKFKEMVTQVLAISAMGNPGDVIPLWNWIDPTCYEKRVKKLAKTSDELLQKLIDEIRNQNDGENTMIQHLLGLQNTQPECYSDQIIKGLVQVAFLAGIDTIVVTLEWALSQLLNNSEVLKKARDEIDSSIGQDRFVNEADLSSLSYLEGIISETLRLNPAAPLLLPHCASEDCKIGGYDVPRDTMVLINAWAIHRDSSLWEDATSFKPERHENAIGVDLYKLLPFGLGRRACPGMGMAQRVIALTLASLIQCFEWQRLSNSLVDMTEGQGLTMPKAQPLTAKCRPRSIMKKLLPMKQ | 502 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 10732512 | 10734651 | + | CrPI670011_02g011600.1 | Cre02g1160 | 490441 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cre02g1160 | 502 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 430 | 439 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cre02g1160 | 502 | Gene3D | Cytochrome P450 | 24 | 498 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre02g1160 | 502 | CDD | CYP81 | 64 | 484 | - | - | |
| Cre02g1160 | 502 | Pfam | Cytochrome P450 | 32 | 480 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre02g1160 | 502 | PANTHER | CYTOCHROME P450 82C3-RELATED | 15 | 491 | IPR050651 | - | |
| Cre02g1160 | 502 | SUPERFAMILY | Cytochrome P450 | 32 | 491 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre02g1160 | 502 | PRINTS | P450 superfamily signature | 428 | 437 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre02g1160 | 502 | PRINTS | P450 superfamily signature | 354 | 365 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre02g1160 | 502 | PRINTS | P450 superfamily signature | 437 | 448 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre02g1160 | 502 | PRINTS | P450 superfamily signature | 301 | 318 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre02g1160 | 502 | FunFam | Cytochrome P450 family protein | 22 | 494 | - | - | |
| Cre02g1160 | 502 | PRINTS | E-class P450 group I signature | 84 | 105 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre02g1160 | 502 | PRINTS | E-class P450 group I signature | 394 | 418 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre02g1160 | 502 | PRINTS | E-class P450 group I signature | 427 | 437 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre02g1160 | 502 | PRINTS | E-class P450 group I signature | 437 | 460 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre02g1160 | 502 | PRINTS | E-class P450 group I signature | 290 | 307 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre02g1160 | 502 | PRINTS | E-class P450 group I signature | 310 | 336 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre02g1160 | 502 | PRINTS | E-class P450 group I signature | 60 | 79 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre02g1160 | 502 | PRINTS | E-class P450 group I signature | 353 | 371 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre02g1160 | 502 | PRINTS | E-class P450 group I signature | 180 | 198 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cre02g1152 | Cre-Chr2:10606533 | Cre02g1160 | Cre-Chr2:10732512 | 1.10E-74 | dispersed | |
| Cre02g1160 | Cre-Chr2:10732512 | Cre04g1338 | Cre-Chr4:32214180 | 2.10E-165 | dispersed | |
| Cre02g1160 | Cre-Chr2:10732512 | Cre02g1162 | Cre-Chr2:10755380 | 1.30E-194 | proximal | |
| Cre02g1159 | Cre-Chr2:10683043 | Cre02g1160 | Cre-Chr2:10732512 | 4.10E-201 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cre02g1160 | K13260 | - | csv:101205391 | 824.698 |