Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cre02g1162 ATGGATTTCAATATCTTGCTTTACATTTTGCTCTCTCTTGTCTGTCTTCTACTTGGCTACTCCTTTTTACTTAAACCTAATCGCTTAAACCTCCCACCAACTCCACTCTTTTGCCTTCCATTTATAGGCCATCTCCATCTTCTCAAACATCCTGTCCACAAAACATTTCAAAATCTCTCCCAAAAGTATGGCCATGTCTTCTCTCTCAAATTCGGTTTCCGTCTTGTCGTACTCGTATCTTCTCCTTCCGCCGTCCAAGAATGTTTTACAAAGAATGATATCATTCTTGCAAATCGACCATCTTTGAACGCTGGAAAGTACTTAGCATACAATAATACCACTATGGCAGTCTCCCCTTATGGTGAACATTGGCGAAACCTTCGCCGAATTAGCACCCTCGAGATTTTCTCAACAACTCGACTTAATTCTTTTTCGAGAATTCGAGAAGATGAAGTCAAACGATTTCTACATAAATTATGTGGTAATTATTATATGTTGGACGATCATGAGTTTAGAGTAGTGGAATTGGAGTCAATGTTGTTGGATCTTACCTTCAATATTGTGATGAGAATGTTGGGTGGAATGAAGTTTTGTGAAGAGAAGAATAATACTTTGTCAGAGGATGAAGGATATTCTAAAAGATTTAGAGAGTTGGTGACACAAATTATGGCACATAGTGGGTCAACAAATCCAGGGGATTTCATACCCTTATGGAATTGGATTGATCCTACTGGTTTTAATAAAAGGATAATGAAACTTGGAAGAAGATCAGATGAACTTCTTCAAGGATTAGTTGATGAGATCAGGAGTCAAGAAGATGAAGGAAACACTATGATTCACCATTTACTTCGCTTACAAAACACTGATCCTGAATATTATAATGACCTGGTTATCAAAGGTCTCATACAAGATATATTAATAGCAGGGATTGACTCAACGGCTGTGACATTACAATGGGCACTATCTCATTTACTTAACAATCCAATCGCGTTAGAGAAAGCCACGACTGAGATGGATCTTCTTGTTGGACAAGAACGTGCGGTGAATGAAGTTGATTTATCAAATTTAAGTTACCTGCGAGGAATAATCTCTGAGACTCTACGGCTAAGTCCGGCTGGTCCTTTGCTTGTACCACATTGTGCATCCGAAGACTGCAAAATAGGAGGTTATGATATTCCACGTAATACTATTATATTGGTCAATGTTTGGGCTATACATAGAGATCCAAATTTATGGGAAGATGCCACCAGTTTTAGGCCTGAAAGACATGCAAATGTGGCTGAATTTGAGTACTCATACAAACTATTACCATTTGGTTTGGGGAGAAGAGCATGCCCTGGCATGGCTATGGCGCAGCGCCTGGTTGGCTTGACTTTGGCATCGTTGGTTCAATGTTTTGAGTGGAAAAGAGCGAGCACGTCGTTGGTTGATATGAGAGAGGGTCAAGGGCTCACAATGCCCAAAGTTGAGCCATTAGTAGCCAAGTGTAGACCGCGCTCGATCATGAAAGCGGTTCTCAGCGAAACAATTGGCTAA 1536 40.17 MDFNILLYILLSLVCLLLGYSFLLKPNRLNLPPTPLFCLPFIGHLHLLKHPVHKTFQNLSQKYGHVFSLKFGFRLVVLVSSPSAVQECFTKNDIILANRPSLNAGKYLAYNNTTMAVSPYGEHWRNLRRISTLEIFSTTRLNSFSRIREDEVKRFLHKLCGNYYMLDDHEFRVVELESMLLDLTFNIVMRMLGGMKFCEEKNNTLSEDEGYSKRFRELVTQIMAHSGSTNPGDFIPLWNWIDPTGFNKRIMKLGRRSDELLQGLVDEIRSQEDEGNTMIHHLLRLQNTDPEYYNDLVIKGLIQDILIAGIDSTAVTLQWALSHLLNNPIALEKATTEMDLLVGQERAVNEVDLSNLSYLRGIISETLRLSPAGPLLVPHCASEDCKIGGYDIPRNTIILVNVWAIHRDPNLWEDATSFRPERHANVAEFEYSYKLLPFGLGRRACPGMAMAQRLVGLTLASLVQCFEWKRASTSLVDMREGQGLTMPKVEPLVAKCRPRSIMKAVLSETIG 511
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
2 10755380 10759140 + CrPI670011_02g011620.1 Cre02g1162 490443
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cre02g1162 511 SUPERFAMILY Cytochrome P450 32 499 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g1162 511 CDD CYP81 64 492 - -
Cre02g1162 511 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g1162 511 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g1162 511 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g1162 511 Gene3D Cytochrome P450 24 502 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g1162 511 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g1162 511 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g1162 511 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g1162 511 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g1162 511 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g1162 511 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g1162 511 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g1162 511 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g1162 511 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g1162 511 PANTHER CYTOCHROME P450 82C3-RELATED 17 499 IPR050651 -
Cre02g1162 511 Pfam Cytochrome P450 33 489 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g1162 511 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cre02g1162 511 FunFam Cytochrome P450 family protein 23 502 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g1154 Cre-Chr2:10621279 Cre02g1162 Cre-Chr2:10755380 7.10E-198 dispersed
Cre02g1159 Cre-Chr2:10683043 Cre02g1162 Cre-Chr2:10755380 2.50E-206 dispersed
Cre02g1162 Cre-Chr2:10755380 Cre04g1338 Cre-Chr4:32214180 1.60E-160 dispersed
Cre02g1160 Cre-Chr2:10732512 Cre02g1162 Cre-Chr2:10755380 1.30E-194 proximal
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre02g1162 K13260 - csv:101205626 848.58