Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cre02g1162 | ATGGATTTCAATATCTTGCTTTACATTTTGCTCTCTCTTGTCTGTCTTCTACTTGGCTACTCCTTTTTACTTAAACCTAATCGCTTAAACCTCCCACCAACTCCACTCTTTTGCCTTCCATTTATAGGCCATCTCCATCTTCTCAAACATCCTGTCCACAAAACATTTCAAAATCTCTCCCAAAAGTATGGCCATGTCTTCTCTCTCAAATTCGGTTTCCGTCTTGTCGTACTCGTATCTTCTCCTTCCGCCGTCCAAGAATGTTTTACAAAGAATGATATCATTCTTGCAAATCGACCATCTTTGAACGCTGGAAAGTACTTAGCATACAATAATACCACTATGGCAGTCTCCCCTTATGGTGAACATTGGCGAAACCTTCGCCGAATTAGCACCCTCGAGATTTTCTCAACAACTCGACTTAATTCTTTTTCGAGAATTCGAGAAGATGAAGTCAAACGATTTCTACATAAATTATGTGGTAATTATTATATGTTGGACGATCATGAGTTTAGAGTAGTGGAATTGGAGTCAATGTTGTTGGATCTTACCTTCAATATTGTGATGAGAATGTTGGGTGGAATGAAGTTTTGTGAAGAGAAGAATAATACTTTGTCAGAGGATGAAGGATATTCTAAAAGATTTAGAGAGTTGGTGACACAAATTATGGCACATAGTGGGTCAACAAATCCAGGGGATTTCATACCCTTATGGAATTGGATTGATCCTACTGGTTTTAATAAAAGGATAATGAAACTTGGAAGAAGATCAGATGAACTTCTTCAAGGATTAGTTGATGAGATCAGGAGTCAAGAAGATGAAGGAAACACTATGATTCACCATTTACTTCGCTTACAAAACACTGATCCTGAATATTATAATGACCTGGTTATCAAAGGTCTCATACAAGATATATTAATAGCAGGGATTGACTCAACGGCTGTGACATTACAATGGGCACTATCTCATTTACTTAACAATCCAATCGCGTTAGAGAAAGCCACGACTGAGATGGATCTTCTTGTTGGACAAGAACGTGCGGTGAATGAAGTTGATTTATCAAATTTAAGTTACCTGCGAGGAATAATCTCTGAGACTCTACGGCTAAGTCCGGCTGGTCCTTTGCTTGTACCACATTGTGCATCCGAAGACTGCAAAATAGGAGGTTATGATATTCCACGTAATACTATTATATTGGTCAATGTTTGGGCTATACATAGAGATCCAAATTTATGGGAAGATGCCACCAGTTTTAGGCCTGAAAGACATGCAAATGTGGCTGAATTTGAGTACTCATACAAACTATTACCATTTGGTTTGGGGAGAAGAGCATGCCCTGGCATGGCTATGGCGCAGCGCCTGGTTGGCTTGACTTTGGCATCGTTGGTTCAATGTTTTGAGTGGAAAAGAGCGAGCACGTCGTTGGTTGATATGAGAGAGGGTCAAGGGCTCACAATGCCCAAAGTTGAGCCATTAGTAGCCAAGTGTAGACCGCGCTCGATCATGAAAGCGGTTCTCAGCGAAACAATTGGCTAA | 1536 | 40.17 | MDFNILLYILLSLVCLLLGYSFLLKPNRLNLPPTPLFCLPFIGHLHLLKHPVHKTFQNLSQKYGHVFSLKFGFRLVVLVSSPSAVQECFTKNDIILANRPSLNAGKYLAYNNTTMAVSPYGEHWRNLRRISTLEIFSTTRLNSFSRIREDEVKRFLHKLCGNYYMLDDHEFRVVELESMLLDLTFNIVMRMLGGMKFCEEKNNTLSEDEGYSKRFRELVTQIMAHSGSTNPGDFIPLWNWIDPTGFNKRIMKLGRRSDELLQGLVDEIRSQEDEGNTMIHHLLRLQNTDPEYYNDLVIKGLIQDILIAGIDSTAVTLQWALSHLLNNPIALEKATTEMDLLVGQERAVNEVDLSNLSYLRGIISETLRLSPAGPLLVPHCASEDCKIGGYDIPRNTIILVNVWAIHRDPNLWEDATSFRPERHANVAEFEYSYKLLPFGLGRRACPGMAMAQRLVGLTLASLVQCFEWKRASTSLVDMREGQGLTMPKVEPLVAKCRPRSIMKAVLSETIG | 511 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 10755380 | 10759140 | + | CrPI670011_02g011620.1 | Cre02g1162 | 490443 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cre02g1162 | 511 | SUPERFAMILY | Cytochrome P450 | 32 | 499 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre02g1162 | 511 | CDD | CYP81 | 64 | 492 | - | - | |
| Cre02g1162 | 511 | PRINTS | P450 superfamily signature | 308 | 325 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre02g1162 | 511 | PRINTS | P450 superfamily signature | 436 | 445 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre02g1162 | 511 | PRINTS | P450 superfamily signature | 361 | 372 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre02g1162 | 511 | Gene3D | Cytochrome P450 | 24 | 502 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre02g1162 | 511 | PRINTS | E-class P450 group I signature | 84 | 105 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre02g1162 | 511 | PRINTS | E-class P450 group I signature | 360 | 378 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre02g1162 | 511 | PRINTS | E-class P450 group I signature | 445 | 468 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre02g1162 | 511 | PRINTS | E-class P450 group I signature | 60 | 79 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre02g1162 | 511 | PRINTS | E-class P450 group I signature | 183 | 201 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre02g1162 | 511 | PRINTS | E-class P450 group I signature | 401 | 425 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre02g1162 | 511 | PRINTS | E-class P450 group I signature | 297 | 314 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre02g1162 | 511 | PRINTS | E-class P450 group I signature | 317 | 343 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre02g1162 | 511 | PRINTS | E-class P450 group I signature | 435 | 445 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre02g1162 | 511 | PANTHER | CYTOCHROME P450 82C3-RELATED | 17 | 499 | IPR050651 | - | |
| Cre02g1162 | 511 | Pfam | Cytochrome P450 | 33 | 489 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre02g1162 | 511 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 438 | 447 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cre02g1162 | 511 | FunFam | Cytochrome P450 family protein | 23 | 502 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cre02g1154 | Cre-Chr2:10621279 | Cre02g1162 | Cre-Chr2:10755380 | 7.10E-198 | dispersed | |
| Cre02g1159 | Cre-Chr2:10683043 | Cre02g1162 | Cre-Chr2:10755380 | 2.50E-206 | dispersed | |
| Cre02g1162 | Cre-Chr2:10755380 | Cre04g1338 | Cre-Chr4:32214180 | 1.60E-160 | dispersed | |
| Cre02g1160 | Cre-Chr2:10732512 | Cre02g1162 | Cre-Chr2:10755380 | 1.30E-194 | proximal |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cre02g1162 | K13260 | - | csv:101205626 | 848.58 |