Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre02g1167 | ATGGTGATTCAGAGAGAAATGGAATTGAGAAGAGCTGGTTATGTGGTTGTTTTTGTGACTCTCCTTTGTGCATTGGCAATTGCCAGTTCAGAGGGCAGAAGGAAGACGGTCGAAATGGTTCTTGCCAATTCCGCCAATTGCCACTCCACATCCTCAAAGTTGGATTCAGATATGGGCCAGAAAGCATGCATGAGAGAATTAGCAGAGAAGGAATATGAAGCAGAAGAATTCGTTCCTTGCATTCATAAAAAAAACATGGGTAAAGATGCTATAAGAATTCTTCCAACTGACATGAAACATGACTTGTTGGATTGTTTAAGAAAGAAAACTATGCTTACTCGTGGTTCTGAACCAAGTTCTAGCTTATTTGATCGGTTTAGCAAACCAATTGAGTTGTTCTTCAGTGGAGGGTCCGATAGTCGCATGAGACATCTAATTAGGGCATCACAAGATTCATCAGAACCACACCTTGCTGAAGCTCCAGCTCCATCTCCATCTTCATCTCCATCTCCTGAAGCAGAATCACCAGCAAGTTCTCCATTCCCGTCTCCCAGTCTTGCTCCAACGCCATCTCCAAGTTATGCCCCAACCAAGTCACCATATCGAAATCTCCGTCCACCTGTTGAGGCTCCAGCTCCGTCTCCAGAACCACTACCAGACGACACTGATGTTTCGGATTTGCCTACACCTTCTGTAGTTCGCTCACCACCTCCTCCACGTGCTTCTCCCAAGTCTCGCCCTCCAAAGAAGCATGAAGAAGACCAGACAGCCATAATTGCTGGTATTGTAGCAGCTGGTGTGGGAGTTGTTCTTGTGGTTGCTCTGCTTTTGTTTTGCTGTCGTAGAGGTGAGAAAAGTAAGGTAGATCCGAAGGATGGGCAAAAGGATGAGAGACCTCTCCTAAACATATCTTTGAGCGAATTATCAGCAGGTTCTTCACAGATGTCATACAGCCTTGGAAATCCAGCTACCAAAGAGGTAAATGCTGGTAATGGAACTAAACCACCCTCATTTGTTGGCAACTTATCAGTGAATCCTGAAAATGGTACCTCTATGGCTGAGGGTCCAACATCTGATGGTAAATCATCAGCAATGCCGCCTCTAAAACCCCCTCCTGGAAGAACAGATTCTCAACCTCCTCCAGCACCAGCACCAGAACCAGCACCAGAACCAGCACCAGCACCAGCACCAGCACCAGCACCGCCTCCGCCGCCTGCTCCTAGAGCCCCACCACCACCACCCCTGAAAGTTGGCCGACCCCCACCTGCACCACCGACGGCAATCCCTGGTAAATCTCAAGCAGCGCCTATGGGGCCACATCAACGTGGACCCAGTGGCTCAAGTATGGATGGGGATTCAGGAGGCCAAAAGACCAAGTTAAAGCCCTTTTTCTGGGATAAGGTTCTCGCTAACCCTGGGCAATCCATGGTCTGGCACGAGATTAGTGCTGGATCATTCCAGTTCAATGAGGAGATGATGGAGTCCTTGTTTGGATATACAGCAGTAGAAACCAACAAAGGCGACCGCAAGAAAGATTTAGCTTCAGACCCTTCAGCACAGTTCATTCAAATCATCGATGCTAAGAAGGCTCAAAACCTTTCAATTCTCCTACGAGCATTGAATGTAACAACAGCAGAAGTTTTGGATGCCCTTGAAGAAGGAAATCCTGATCTTCCAGCAGAGCTTCTGCAGACCTTGTTGAAGATGGCACCAACAACAGAAGAGGAACTGAAACTGAGATTATTTTCAGGGGATCTTTCTCAGCTAGGTCCAGCAGAGCGATTCCTCAAAGTGTTGGTGGATGTTCCTTTTGCTTTTAAACGATTAGAGTGTCTTCTCTTCATGCTTTCAATGTCGGAAGACGTCACTAACATTAAGGAGTCATTCGCTACTCTAGAGGTCGCATGCAACAATCTTAGAAATAGCAGGCTGTTTCTCAAGCTATTAGAAGCAGTTCTCAAAACTGGAAATCGAATGAACGACGGGACGTACCGTGGGGGTGCTCAGGCATTCAAGCTCGATACGCTTTTGAAACTAGCGGATGTTAAAGGAACCGATGGCAAGACTACACTCTTACACTTTGTCGTACAGGAGATTATTCGTTCGGAGGGCATCCGAGCAGCCCGCTCCGACAGACAAAGCCGGAGTTCGTCCAGCATAATCTCCAGCGATACGATTTTCGAGGACTTCACCGACGATTCGACGGAACATTATCGGCAATTAGGGCTTCAGGTGGTTTCTAGTTTAAGCACGGAGCTCCAGGACGTTAAAAGAGCGGCTGCCATAGATGCGGAGGGGCTAACGACGACGATATCGAAACTTGGCCAGTCTCTGTTTAAAACCAAAGCATTTATAGACGCGGAGATGAAGAGTTTAGACGAAGACAGCAAATTCCACCAATCGTTGTCGAAATTTTTGGAAGGAGCGGAAGCAGATATTTCGTGGATTGCAGTGGAAGAAAAGAAGATAATGGCATTGGTGAGGAGCACGGTGGATTACTTCCATGGACATTCTGGAAAGGAGGAAGGATTGAGATTGTTTACGATCGTACGGGATTTCTTGATTGTGTTGGACAAGACATGTAAACAGGTCAAAGAAGCAGCTGAGGCTGCGGCCAAGCAAGCGAAGAATTCCAAAAAAGAAACTGCGACATCGTCGGCAACTTACAAGCAGAATTCAGATCTACGGCAGCGACTATTTCCGGCAATTGCAGAACGACGGATAGGCGATGATTCAAGTTCTTCGGACGAGGACGACGATGGCGAGAGTTCATCTTCATCATCCTAG | 2787 | 47.15 | MVIQREMELRRAGYVVVFVTLLCALAIASSEGRRKTVEMVLANSANCHSTSSKLDSDMGQKACMRELAEKEYEAEEFVPCIHKKNMGKDAIRILPTDMKHDLLDCLRKKTMLTRGSEPSSSLFDRFSKPIELFFSGGSDSRMRHLIRASQDSSEPHLAEAPAPSPSSSPSPEAESPASSPFPSPSLAPTPSPSYAPTKSPYRNLRPPVEAPAPSPEPLPDDTDVSDLPTPSVVRSPPPPRASPKSRPPKKHEEDQTAIIAGIVAAGVGVVLVVALLLFCCRRGEKSKVDPKDGQKDERPLLNISLSELSAGSSQMSYSLGNPATKEVNAGNGTKPPSFVGNLSVNPENGTSMAEGPTSDGKSSAMPPLKPPPGRTDSQPPPAPAPEPAPEPAPAPAPAPAPPPPPAPRAPPPPPLKVGRPPPAPPTAIPGKSQAAPMGPHQRGPSGSSMDGDSGGQKTKLKPFFWDKVLANPGQSMVWHEISAGSFQFNEEMMESLFGYTAVETNKGDRKKDLASDPSAQFIQIIDAKKAQNLSILLRALNVTTAEVLDALEEGNPDLPAELLQTLLKMAPTTEEELKLRLFSGDLSQLGPAERFLKVLVDVPFAFKRLECLLFMLSMSEDVTNIKESFATLEVACNNLRNSRLFLKLLEAVLKTGNRMNDGTYRGGAQAFKLDTLLKLADVKGTDGKTTLLHFVVQEIIRSEGIRAARSDRQSRSSSSIISSDTIFEDFTDDSTEHYRQLGLQVVSSLSTELQDVKRAAAIDAEGLTTTISKLGQSLFKTKAFIDAEMKSLDEDSKFHQSLSKFLEGAEADISWIAVEEKKIMALVRSTVDYFHGHSGKEEGLRLFTIVRDFLIVLDKTCKQVKEAAEAAAKQAKNSKKETATSSATYKQNSDLRQRLFPAIAERRIGDDSSSSDEDDDGESSSSSS | 928 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 10808156 | 10811551 | - | CrPI670011_02g011670.1 | Cre02g1167 | 490448 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre02g1167 | 928 | PRINTS | Proline rich extensin signature | 208 | 229 | - | - | |
Cre02g1167 | 928 | PRINTS | Proline rich extensin signature | 189 | 201 | - | - | |
Cre02g1167 | 928 | PRINTS | Proline rich extensin signature | 153 | 165 | - | - | |
Cre02g1167 | 928 | PRINTS | Proline rich extensin signature | 232 | 248 | - | - | |
Cre02g1167 | 928 | PRINTS | Proline rich extensin signature | 168 | 184 | - | - | |
Cre02g1167 | 928 | PRINTS | Proline rich extensin signature | 362 | 387 | - | - | |
Cre02g1167 | 928 | MobiDBLite | consensus disorder prediction | 148 | 253 | - | - | |
Cre02g1167 | 928 | SMART | it6_source | 450 | 872 | IPR015425 | - | |
Cre02g1167 | 928 | PANTHER | FORMIN-RELATED | 119 | 917 | IPR027643 | GO:0003779(InterPro)|GO:0030036(InterPro)|GO:0045010(InterPro)|GO:0051015(InterPro) | |
Cre02g1167 | 928 | MobiDBLite | consensus disorder prediction | 305 | 358 | - | - | |
Cre02g1167 | 928 | MobiDBLite | consensus disorder prediction | 284 | 298 | - | - | |
Cre02g1167 | 928 | MobiDBLite | consensus disorder prediction | 914 | 928 | - | - | |
Cre02g1167 | 928 | ProSiteProfiles | Formin homology-2 (FH2) domain profile. | 450 | 883 | IPR015425 | - | |
Cre02g1167 | 928 | MobiDBLite | consensus disorder prediction | 365 | 429 | - | - | |
Cre02g1167 | 928 | MobiDBLite | consensus disorder prediction | 877 | 895 | - | - | |
Cre02g1167 | 928 | Coils | Coil | 861 | 881 | - | - | |
Cre02g1167 | 928 | Gene3D | Formin, FH2 domain | 458 | 897 | IPR042201 | - | |
Cre02g1167 | 928 | MobiDBLite | consensus disorder prediction | 162 | 195 | - | - | |
Cre02g1167 | 928 | Pfam | Formin Homology 2 Domain | 456 | 856 | IPR015425 | - | |
Cre02g1167 | 928 | MobiDBLite | consensus disorder prediction | 284 | 459 | - | - | |
Cre02g1167 | 928 | MobiDBLite | consensus disorder prediction | 872 | 928 | - | - | |
Cre02g1167 | 928 | SUPERFAMILY | Formin homology 2 domain (FH2 domain) | 520 | 877 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre02g1167 | Cre-Chr2:10808156 | Cre05g1650 | Cre-Chr5:27306911 | 7.40E-156 | dispersed | |
Cre02g1167 | Cre-Chr2:10808156 | Cre01g1538 | Cre-Chr1:28597524 | 5.90E-28 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre02g1167 | K28090 | - | csv:101206094 | 1052.35 |