Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cre02g1167 ATGGTGATTCAGAGAGAAATGGAATTGAGAAGAGCTGGTTATGTGGTTGTTTTTGTGACTCTCCTTTGTGCATTGGCAATTGCCAGTTCAGAGGGCAGAAGGAAGACGGTCGAAATGGTTCTTGCCAATTCCGCCAATTGCCACTCCACATCCTCAAAGTTGGATTCAGATATGGGCCAGAAAGCATGCATGAGAGAATTAGCAGAGAAGGAATATGAAGCAGAAGAATTCGTTCCTTGCATTCATAAAAAAAACATGGGTAAAGATGCTATAAGAATTCTTCCAACTGACATGAAACATGACTTGTTGGATTGTTTAAGAAAGAAAACTATGCTTACTCGTGGTTCTGAACCAAGTTCTAGCTTATTTGATCGGTTTAGCAAACCAATTGAGTTGTTCTTCAGTGGAGGGTCCGATAGTCGCATGAGACATCTAATTAGGGCATCACAAGATTCATCAGAACCACACCTTGCTGAAGCTCCAGCTCCATCTCCATCTTCATCTCCATCTCCTGAAGCAGAATCACCAGCAAGTTCTCCATTCCCGTCTCCCAGTCTTGCTCCAACGCCATCTCCAAGTTATGCCCCAACCAAGTCACCATATCGAAATCTCCGTCCACCTGTTGAGGCTCCAGCTCCGTCTCCAGAACCACTACCAGACGACACTGATGTTTCGGATTTGCCTACACCTTCTGTAGTTCGCTCACCACCTCCTCCACGTGCTTCTCCCAAGTCTCGCCCTCCAAAGAAGCATGAAGAAGACCAGACAGCCATAATTGCTGGTATTGTAGCAGCTGGTGTGGGAGTTGTTCTTGTGGTTGCTCTGCTTTTGTTTTGCTGTCGTAGAGGTGAGAAAAGTAAGGTAGATCCGAAGGATGGGCAAAAGGATGAGAGACCTCTCCTAAACATATCTTTGAGCGAATTATCAGCAGGTTCTTCACAGATGTCATACAGCCTTGGAAATCCAGCTACCAAAGAGGTAAATGCTGGTAATGGAACTAAACCACCCTCATTTGTTGGCAACTTATCAGTGAATCCTGAAAATGGTACCTCTATGGCTGAGGGTCCAACATCTGATGGTAAATCATCAGCAATGCCGCCTCTAAAACCCCCTCCTGGAAGAACAGATTCTCAACCTCCTCCAGCACCAGCACCAGAACCAGCACCAGAACCAGCACCAGCACCAGCACCAGCACCAGCACCGCCTCCGCCGCCTGCTCCTAGAGCCCCACCACCACCACCCCTGAAAGTTGGCCGACCCCCACCTGCACCACCGACGGCAATCCCTGGTAAATCTCAAGCAGCGCCTATGGGGCCACATCAACGTGGACCCAGTGGCTCAAGTATGGATGGGGATTCAGGAGGCCAAAAGACCAAGTTAAAGCCCTTTTTCTGGGATAAGGTTCTCGCTAACCCTGGGCAATCCATGGTCTGGCACGAGATTAGTGCTGGATCATTCCAGTTCAATGAGGAGATGATGGAGTCCTTGTTTGGATATACAGCAGTAGAAACCAACAAAGGCGACCGCAAGAAAGATTTAGCTTCAGACCCTTCAGCACAGTTCATTCAAATCATCGATGCTAAGAAGGCTCAAAACCTTTCAATTCTCCTACGAGCATTGAATGTAACAACAGCAGAAGTTTTGGATGCCCTTGAAGAAGGAAATCCTGATCTTCCAGCAGAGCTTCTGCAGACCTTGTTGAAGATGGCACCAACAACAGAAGAGGAACTGAAACTGAGATTATTTTCAGGGGATCTTTCTCAGCTAGGTCCAGCAGAGCGATTCCTCAAAGTGTTGGTGGATGTTCCTTTTGCTTTTAAACGATTAGAGTGTCTTCTCTTCATGCTTTCAATGTCGGAAGACGTCACTAACATTAAGGAGTCATTCGCTACTCTAGAGGTCGCATGCAACAATCTTAGAAATAGCAGGCTGTTTCTCAAGCTATTAGAAGCAGTTCTCAAAACTGGAAATCGAATGAACGACGGGACGTACCGTGGGGGTGCTCAGGCATTCAAGCTCGATACGCTTTTGAAACTAGCGGATGTTAAAGGAACCGATGGCAAGACTACACTCTTACACTTTGTCGTACAGGAGATTATTCGTTCGGAGGGCATCCGAGCAGCCCGCTCCGACAGACAAAGCCGGAGTTCGTCCAGCATAATCTCCAGCGATACGATTTTCGAGGACTTCACCGACGATTCGACGGAACATTATCGGCAATTAGGGCTTCAGGTGGTTTCTAGTTTAAGCACGGAGCTCCAGGACGTTAAAAGAGCGGCTGCCATAGATGCGGAGGGGCTAACGACGACGATATCGAAACTTGGCCAGTCTCTGTTTAAAACCAAAGCATTTATAGACGCGGAGATGAAGAGTTTAGACGAAGACAGCAAATTCCACCAATCGTTGTCGAAATTTTTGGAAGGAGCGGAAGCAGATATTTCGTGGATTGCAGTGGAAGAAAAGAAGATAATGGCATTGGTGAGGAGCACGGTGGATTACTTCCATGGACATTCTGGAAAGGAGGAAGGATTGAGATTGTTTACGATCGTACGGGATTTCTTGATTGTGTTGGACAAGACATGTAAACAGGTCAAAGAAGCAGCTGAGGCTGCGGCCAAGCAAGCGAAGAATTCCAAAAAAGAAACTGCGACATCGTCGGCAACTTACAAGCAGAATTCAGATCTACGGCAGCGACTATTTCCGGCAATTGCAGAACGACGGATAGGCGATGATTCAAGTTCTTCGGACGAGGACGACGATGGCGAGAGTTCATCTTCATCATCCTAG 2787 47.15 MVIQREMELRRAGYVVVFVTLLCALAIASSEGRRKTVEMVLANSANCHSTSSKLDSDMGQKACMRELAEKEYEAEEFVPCIHKKNMGKDAIRILPTDMKHDLLDCLRKKTMLTRGSEPSSSLFDRFSKPIELFFSGGSDSRMRHLIRASQDSSEPHLAEAPAPSPSSSPSPEAESPASSPFPSPSLAPTPSPSYAPTKSPYRNLRPPVEAPAPSPEPLPDDTDVSDLPTPSVVRSPPPPRASPKSRPPKKHEEDQTAIIAGIVAAGVGVVLVVALLLFCCRRGEKSKVDPKDGQKDERPLLNISLSELSAGSSQMSYSLGNPATKEVNAGNGTKPPSFVGNLSVNPENGTSMAEGPTSDGKSSAMPPLKPPPGRTDSQPPPAPAPEPAPEPAPAPAPAPAPPPPPAPRAPPPPPLKVGRPPPAPPTAIPGKSQAAPMGPHQRGPSGSSMDGDSGGQKTKLKPFFWDKVLANPGQSMVWHEISAGSFQFNEEMMESLFGYTAVETNKGDRKKDLASDPSAQFIQIIDAKKAQNLSILLRALNVTTAEVLDALEEGNPDLPAELLQTLLKMAPTTEEELKLRLFSGDLSQLGPAERFLKVLVDVPFAFKRLECLLFMLSMSEDVTNIKESFATLEVACNNLRNSRLFLKLLEAVLKTGNRMNDGTYRGGAQAFKLDTLLKLADVKGTDGKTTLLHFVVQEIIRSEGIRAARSDRQSRSSSSIISSDTIFEDFTDDSTEHYRQLGLQVVSSLSTELQDVKRAAAIDAEGLTTTISKLGQSLFKTKAFIDAEMKSLDEDSKFHQSLSKFLEGAEADISWIAVEEKKIMALVRSTVDYFHGHSGKEEGLRLFTIVRDFLIVLDKTCKQVKEAAEAAAKQAKNSKKETATSSATYKQNSDLRQRLFPAIAERRIGDDSSSSDEDDDGESSSSSS 928
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
2 10808156 10811551 - CrPI670011_02g011670.1 Cre02g1167 490448
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cre02g1167 928 PRINTS Proline rich extensin signature 208 229 - -
Cre02g1167 928 PRINTS Proline rich extensin signature 189 201 - -
Cre02g1167 928 PRINTS Proline rich extensin signature 153 165 - -
Cre02g1167 928 PRINTS Proline rich extensin signature 232 248 - -
Cre02g1167 928 PRINTS Proline rich extensin signature 168 184 - -
Cre02g1167 928 PRINTS Proline rich extensin signature 362 387 - -
Cre02g1167 928 MobiDBLite consensus disorder prediction 148 253 - -
Cre02g1167 928 SMART it6_source 450 872 IPR015425 -
Cre02g1167 928 PANTHER FORMIN-RELATED 119 917 IPR027643 GO:0003779(InterPro)|GO:0030036(InterPro)|GO:0045010(InterPro)|GO:0051015(InterPro)
Cre02g1167 928 MobiDBLite consensus disorder prediction 305 358 - -
Cre02g1167 928 MobiDBLite consensus disorder prediction 284 298 - -
Cre02g1167 928 MobiDBLite consensus disorder prediction 914 928 - -
Cre02g1167 928 ProSiteProfiles Formin homology-2 (FH2) domain profile. 450 883 IPR015425 -
Cre02g1167 928 MobiDBLite consensus disorder prediction 365 429 - -
Cre02g1167 928 MobiDBLite consensus disorder prediction 877 895 - -
Cre02g1167 928 Coils Coil 861 881 - -
Cre02g1167 928 Gene3D Formin, FH2 domain 458 897 IPR042201 -
Cre02g1167 928 MobiDBLite consensus disorder prediction 162 195 - -
Cre02g1167 928 Pfam Formin Homology 2 Domain 456 856 IPR015425 -
Cre02g1167 928 MobiDBLite consensus disorder prediction 284 459 - -
Cre02g1167 928 MobiDBLite consensus disorder prediction 872 928 - -
Cre02g1167 928 SUPERFAMILY Formin homology 2 domain (FH2 domain) 520 877 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g1167 Cre-Chr2:10808156 Cre05g1650 Cre-Chr5:27306911 7.40E-156 dispersed
Cre02g1167 Cre-Chr2:10808156 Cre01g1538 Cre-Chr1:28597524 5.90E-28 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre02g1167 K28090 - csv:101206094 1052.35