Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre02g1310 ATGCCGAAGGGTTTGAAGAGTAAATGTCAGTCTACGTCTCATCAGCTTTTGAAGGAAAAAGCAAAGAACCGTGTTAATGACCTTCAAGGGATATTCACTAATCTTCAAAATGCAAGAAAGGAGAGTCGTACAACTGACGTTGCTGTTTTGGAGGAGCAAGTCCATCAGATGCTCAGGGAGTGGAATGCTGAGCTTAATGAACCGTCACCTGCCTCTTCATTTGTTGAGGGTAGTCTTGGATCATTCTCGCAAGAGTTAGCCCGTCTTCTTGAGCATTGTGATGAGGAAGATGATGCAACTAGTATATTGGCTGAACCAAAGGCTGAGACTGAGCTCCATTGCGTTCTTGCCAGCAATCCGTCAAATTGTGTACAGGATGGTTTTTGTATTCCAGAGCTCCAACAGGATAGTTTTCTTGGGTTTGAGGAGTGCAAAGTCTCGCCTCCAGATCTACAGAATTATTCATTTTACAAATTGGACATGGCTACTCAGTCTATTTGTCAAAGTTTCAAATTAGATCAAAACTTCGAGCAGACAACAGTGGCCAGTAAGGATGATGTGTCTACTTTGAACTGCCATATATTGAACTCACATCCAGAGTTCGACTATGGGGTTCTTATTGGGGCATCTGATGTGGGAGACTTTAGTCAGGACACAAAACCCAGTATTCTCCCAAATATCTCACCCCCACCATCTGCTTTTATGGGCCCAATATGTGCTCTATGGGATTGTTTCAGACCTGCTCAAGGATCTAAATGGTGTCAGGATTATTGCAGTAGCTGTCATTCTGTTCTTGCTATAAACGAAGGCCTTCCTGGAATGATTCCAATATTGCGCCCTGGGGGAATTGGCTTTAAGGATGGTCCTTTGTTTGCTGCTCTTCATGCAAAGACACAGGCCAAAGAAGTTGGAATACCCATATGTGATGGTGCTGCAACAAGAAAATCTCCATGGAATGCTCCTGAGCTTTTTGATATTACATTTCTTGAGGGGGAGACAATCAGGGAATGGCTCTACTTCGACAAGCCTAGAAGAGCCTTTGAGAGTGGCAATCGAAGGCAAAGGTCATTGCCGGATTATAGTGGCCGTGGTTGGCATGAATCAAGGAAGCTGGTGATGAAGGAGTTTGGTGGTCAGAAGAAGTCTTATTACATGGATCCACAGCCATCAAGCTCTCTTGAATGGCATTTGTACGAATATGATATCACCAATTATGATTCATTCGCATTATATAGGCTGGAACTCAAGCATGTTGATGCAAAGAAGAGTCCAAAAGGAAAACTGGCAGCTGATCCTCTGGCTGATCTGCAGAAGAAGATGGGAAGGCTTACTGCAGAGGGCCCTGTTGAGCTTGGACAACCAGTTAAAGGTAAGATTACGACAAAGACGAATAATAAAAAGCTTGATACTGCAAACATCAACCTTGCTCCGCATCATCAGAATATGACGAACACCAACTGA 1461 43.67 MPKGLKSKCQSTSHQLLKEKAKNRVNDLQGIFTNLQNARKESRTTDVAVLEEQVHQMLREWNAELNEPSPASSFVEGSLGSFSQELARLLEHCDEEDDATSILAEPKAETELHCVLASNPSNCVQDGFCIPELQQDSFLGFEECKVSPPDLQNYSFYKLDMATQSICQSFKLDQNFEQTTVASKDDVSTLNCHILNSHPEFDYGVLIGASDVGDFSQDTKPSILPNISPPPSAFMGPICALWDCFRPAQGSKWCQDYCSSCHSVLAINEGLPGMIPILRPGGIGFKDGPLFAALHAKTQAKEVGIPICDGAATRKSPWNAPELFDITFLEGETIREWLYFDKPRRAFESGNRRQRSLPDYSGRGWHESRKLVMKEFGGQKKSYYMDPQPSSSLEWHLYEYDITNYDSFALYRLELKHVDAKKSPKGKLAADPLADLQKKMGRLTAEGPVELGQPVKGKITTKTNNKKLDTANINLAPHHQNMTNTN 486
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 16281353 16283762 + CrPI670011_02g013100.1 Cre02g1310 490591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre02g1310 486 Coils Coil 18 38 - -
Cre02g1310 486 PANTHER TRANSCRIPTION FACTOR VOZ1 1 478 IPR039277 GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0043565(PANTHER)|GO:0045893(PANTHER)|GO:0048578(InterPro)|GO:0048578(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g1310 Cre-Chr2:16281353 Cre04g1950 Cre-Chr4:36991625 8.70E-132 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
53148 None None None None Cre TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre02g1310 - - - 0.0