Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre02g1440 ATGGTGTTGTCTCTGATGGAAAACAAGAAGATGAAGATTAGTCTATTTACCTCCAGTTTATGCTTGTGTTTTTTGCTTTTAATTTGGTCCGCTAGAGGGAATCTCATCAATTCATTAAGTGACAGTAATGGAGATTCTATTGTTTCGGATGAAGGAAGGTTCGAACTTGGTTTTTTCAGTCCTCATGGAAGCTCAGACTCTAGAAGATACGTCGGAATATGGTACCACGACACAAAACCGGAGGTGGTTGTATGGGTTGCCAATAGGAACCAACCACTATACAACAACAATGGAGTTTTCGCTATCAAAAATGGCAAACTCATGGTATTGGCATCAAACGGCACTGATTTATGGTCCACCGAGCTCCAATTCCCTTCTGATAACATGACAATGGAGCTGATGGCTTCTGGGAATTTAATCATCAAGCAATCAGGTGTCAAAGGTATCATTATGTGGCAAAGCTTCCACAATCCAACCGACACATTTCTTCCAGGAATGAACATGGCTGATGACTGGAAACTGACTTCTTGGAAAGCTTCAGATGACCCATCGTCTGGGAATTTCACGTTTCTTAAAGATACAGGAGGTCGCTACATCATTGAAAGACTAAGTGCTCAGTATTGGGTTAGCAAGGAATTCTGGCAAAATTACTCAACTGACACTAATGGAAAGATTGATGAAGTTATAGACTTATTGTCAACGATTAGTGTCGCTAGCTTGAAGGCCAACAACTACACCGTTAATTTCCAAAATCAAGAACTGGATTACAACTATACAAGGGTGGTCATGAATTCCACCGGGAGAATTCAGTATCTTGCAAGAAACAGAGCGAATGGAAAATGGGATGTCATCTGGTCGGAACCGGAAAACATATGTGGTGCAGTGTCAACTTGTGGGACCTTTGCTAGCTGTCGAAGTGACACTGAACACACTTGCAGATGCTTGCCTGGGTTTGAACCTAAGTTGAAGGAAGAATGGGATTCTGGTGATTACTCAAATGGGTGCCAGAGAAAATCAGAAATTTGCATCAAAGAAGAGGTTGAAGCTCGAGATTTCTTGACAATAAGTATGAAGGTGAGAAAGACATCCAATATTGTCAAACTCAATGGTATTGAGGAATGTCAAATCAAGTGCCTTGAATCTTGTACATGTAGAGCATATGTAGAAATTAGTACTATTAGATCTGATATTGTGTGCGGTATTTGGGAAGATGACCTCCAAAGCATTTGGGAATATACCGATGGTGGTGCTAATGTTAACGTCCGTGTCAAACGTTTTGACATAGAATTGACACAACTCGATTGTAAAACGTGTGGAAGCAACATTGTCCCTTATCCTCTAAGTTTGAGCACAGAATCTGACTGTGGTGATCCTCTATATCGTAACTTCAGTTGCAACTTTTCCACTGGTCAGATCATCTTTCAAACGGCAGATGTTTACTACAATGTCACCAACATCAACCCACAACTAAAAACTTTTACCATTGCAACAAATGGGTCTATCTGCAGAGGTAATGATACAAATGCAATTCAAAAGCTTCTGAAATTGGAACACTCGTCTACATTCAAAGTAAGCAGCAGCTGTAACTCTGAATTCAATGAAATTGATATTCAATGGGAGAAACCATTAGAGCCAATCTGCAGTTCACCAAGAGATTGCACCAATTGGCCTAATTCATTATGCAACTCATCAACAGATGGAACAAAGAGGTGCTTGTGTCATTCTTCTTTTAAATGGATTGGTACCGGCTGCCAAATTCTTCCAGAGGATGGTTTGAATAAGCCACATCCAAGGCAGAGAAATATCAGAATTAGTATCATTGTCGTAGTGATCATGGCTGGGTTGATTGTTATTTCGTGCTTGGTGTCGTATATTTACTACAAAAGAAGGAAGGTACAACATAAAAAAGAGCAAAGAACAAGTTTTTGGGGAAACCAGGAAACGACTCACTTATATGAAAGTGAGAAACGTATTAGAGACTTTATGGGTTCCGGAATGTTTGGAGAAGATGATAGAAAAGCCATAGAAGTACCAGTTTTTGATTTGGAAACCATACTTATTGCCACAGACAACTTCTCGGAAGCAAACAAAATTGGACGAGGAGGATTTGGGACAGTGTACAAGGGACGTTTCTCGGGAGGACTGGAAATTGCAATAAAGAGGCTGTCGCAAGGTTCTGCCCAAGGCGTAAATGAGTTTAAGAATGAAGCAATTCTGATCGCCAAACTTCAGCATCGAAATCTAGTTAGACTTTTGGGCTATTGTGTTGCAGGAGAAGAGAAAATGTTGGTCTATGAATATATGCCCAACAAAAGCTTAGACTTTTTTATGTTTGATCAAACACAAAGGTTACTGTTGAATTGGGAGACGCGTTTTAATATCATCATCGGCATTGCTCGAGGGCTAGTTTATCTCCATGAAGATTCAAGGTTGAAGATTATTCATAGAGATATGAAAACAAGCAATGTTTTGTTGGACGCAGAAATGAACCCTAAAATTTCCGACTTTGGTTTAGCAAGAATCATTGATGGCAAGCAAACAGAGGCAATCACCAACAGAGTTGTTGGAACTTACGGATACATGTCACCTGAATATGCATTGGATGGATCATTCTCGGTGAAATCTGACGTGTTCAGTTACGGTATAGTCGTGTTGGAGATTATTAGTGGAAGAAGGAACACTGGGTTCTACCAATCTAAAGAGGCATTAAACCTTCTTGGATATGTATGGAATTTGTGGAGAGAAAAAAAGGCAATGGAAATAGCAGAGGTGGGCATACGAGAAAGCTGCAATCCAAATGAAGTTGTAAAATGTGTGGGTGTGGGATTGCTTTGTGTGCAAGAAGACCCCAATGATCGTCCCACAATGTCAAATGTAGCTTTTATGTTAAGCTCTGGCAATGACCTTGCTTCGCTTCCAGATCCTAAACAACCAGCTTACGTTGATAAAAGATTAACTCCTGCTTCTTCTGCAACTTCTTCTTTAGGCTTGAAGCAAGAAATTGTAAGCAATGATTATAGCTTGCTTGAGCCTCGTTAA 3039 40.11 MVLSLMENKKMKISLFTSSLCLCFLLLIWSARGNLINSLSDSNGDSIVSDEGRFELGFFSPHGSSDSRRYVGIWYHDTKPEVVVWVANRNQPLYNNNGVFAIKNGKLMVLASNGTDLWSTELQFPSDNMTMELMASGNLIIKQSGVKGIIMWQSFHNPTDTFLPGMNMADDWKLTSWKASDDPSSGNFTFLKDTGGRYIIERLSAQYWVSKEFWQNYSTDTNGKIDEVIDLLSTISVASLKANNYTVNFQNQELDYNYTRVVMNSTGRIQYLARNRANGKWDVIWSEPENICGAVSTCGTFASCRSDTEHTCRCLPGFEPKLKEEWDSGDYSNGCQRKSEICIKEEVEARDFLTISMKVRKTSNIVKLNGIEECQIKCLESCTCRAYVEISTIRSDIVCGIWEDDLQSIWEYTDGGANVNVRVKRFDIELTQLDCKTCGSNIVPYPLSLSTESDCGDPLYRNFSCNFSTGQIIFQTADVYYNVTNINPQLKTFTIATNGSICRGNDTNAIQKLLKLEHSSTFKVSSSCNSEFNEIDIQWEKPLEPICSSPRDCTNWPNSLCNSSTDGTKRCLCHSSFKWIGTGCQILPEDGLNKPHPRQRNIRISIIVVVIMAGLIVISCLVSYIYYKRRKVQHKKEQRTSFWGNQETTHLYESEKRIRDFMGSGMFGEDDRKAIEVPVFDLETILIATDNFSEANKIGRGGFGTVYKGRFSGGLEIAIKRLSQGSAQGVNEFKNEAILIAKLQHRNLVRLLGYCVAGEEKMLVYEYMPNKSLDFFMFDQTQRLLLNWETRFNIIIGIARGLVYLHEDSRLKIIHRDMKTSNVLLDAEMNPKISDFGLARIIDGKQTEAITNRVVGTYGYMSPEYALDGSFSVKSDVFSYGIVVLEIISGRRNTGFYQSKEALNLLGYVWNLWREKKAMEIAEVGIRESCNPNEVVKCVGVGLLCVQEDPNDRPTMSNVAFMLSSGNDLASLPDPKQPAYVDKRLTPASSATSSLGLKQEIVSNDYSLLEPR 1012
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 25600982 25604633 + CrPI670011_02g014400.1 Cre02g1440 490721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre02g1440 1012 ProSiteProfiles Bulb-type lectin domain profile. 32 154 IPR001480 -
Cre02g1440 1012 SMART blect_4 38 158 IPR001480 -
Cre02g1440 1012 CDD B_lectin 38 158 IPR001480 -
Cre02g1440 1012 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 658 767 - -
Cre02g1440 1012 Gene3D Transferase(Phosphotransferase) domain 1 768 972 - -
Cre02g1440 1012 Pfam Protein tyrosine and serine/threonine kinase 695 960 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre02g1440 1012 SUPERFAMILY alpha-D-mannose-specific plant lectins 83 183 IPR036426 -
Cre02g1440 1012 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 22 978 - -
Cre02g1440 1012 ProSiteProfiles PAN/Apple domain profile. 342 426 IPR003609 -
Cre02g1440 1012 Pfam S-locus glycoprotein domain 242 321 IPR000858 GO:0048544(InterPro)
Cre02g1440 1012 ProSitePatterns Protein kinases ATP-binding region signature. 698 720 IPR017441 GO:0005524(InterPro)
Cre02g1440 1012 Gene3D Phosphorylase Kinase; domain 1 666 767 - -
Cre02g1440 1012 Pfam PAN-like domain 357 408 IPR003609 -
Cre02g1440 1012 ProSitePatterns Serine/Threonine protein kinases active-site signature. 813 825 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre02g1440 1012 CDD STKc_IRAK 698 963 - -
Cre02g1440 1012 SUPERFAMILY Protein kinase-like (PK-like) 676 977 IPR011009 -
Cre02g1440 1012 Pfam D-mannose binding lectin 83 178 IPR001480 -
Cre02g1440 1012 Gene3D - 32 156 IPR036426 -
Cre02g1440 1012 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 768 971 - -
Cre02g1440 1012 ProSiteProfiles Protein kinase domain profile. 692 980 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre02g1440 1012 SMART serkin_6 692 962 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g0488 Cre-Chr2:2055648 Cre02g1440 Cre-Chr2:25600982 2.10E-271 dispersed
Cre02g1440 Cre-Chr2:25600982 Cre03g0826 Cre-Chr3:7019879 7.10E-152 dispersed
Cre02g1440 Cre-Chr2:25600982 Cre04g1626 Cre-Chr4:34674730 1.50E-49 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63869 PF07714 PK_Tyr_Ser-Thr 1.00E-47 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre02g1440 - - - 0.0