Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre02g1490 ATGGGTTCTTTGAAGCTGCCGCCTTCGACGACGGTGCTGAAATGGCTGGGGTTTGTCTCCGCCGTGTGGGTTCAGGCCATTTCCGGAAACAACTACACTTTTTCCAACTACTCCGACTCCCTCAAATCTCTGATGAATCTAACCCAACTTCAGCTCAATAATCTCTCCGTCGCTAAAGACGTCGGAAAAGCCTTCGGACTTCTCGCCGGAGTCGCCTGTGACCGGTTTCCCACATGGGTGATCTTGCTTATTGGATCTCTTGAAGGTCTTCTTGGCTATGGCGCTCAGTGGCTTGTCGTTAGCCAAAGGATTTCTCCTCTTCCTTATTGGCAGATGTGCATCTTCTTGTGTTTGGGCGGAAACAGCACGACATGGATGAACACGGCGGTGCTAGTAACTTGCATCAGAAACTTCCGGAAGAATCGCGGCCCAGTTTCCGGCATTCTCAAAGGCTACGTCGGCCTCAGCACCGCCATTTTCACCGATCTCTGTACTGCTCTGTTTTCCGGCGACCCATCTTCTTTCCTCCTCATGCTCGCCTTTGTCCCCTTCGCCGTCTGTCTCTTCGCCATGTTCTTCCTCCGCGAAATCCCACCTCCAACCACCGCCGCCGATACCCAACAAGAATCCAATTACTTCTCCGTCTTCAACGCTCTCGCCGTCGTCGTCGCCGTCTATCTCTTATGCTTCGATTTCATCAAAAACTCCGGCAGGCTCTTCTCCCAAATATTCTCCATCGGGCTACTGATTCTCCTCGGATCCCCTTTGATCATCCCAATTTACACGTTTTTCAAGAGCTGGCACTCGAATCGAGCCGGATCGGATCTGGAAGCTCGAATTGAGGAGCCGCTACTGAAAGAAGAGGCAGTTGCGGCGCCGGTAAAGGGGGAAGCAGAGGAAATTGCAGAGGTAGAGCAGAGAGCGCCGGTGATCGGAGAAGAACACACGATTTTTGAAGCGGTGAGAACAATTGATTTCTGGGTGTTGTTCGTGTCGTTTCTGTGTGGAGTTGGAACGGGATTGGCGGTGATGAACAATATGGGTCAGATCGGATTGGCTCTGGGTTACGCCGATGTATCAGTGTTCGTTTCTCTCACAAGTATTTGGGGATTTTTCGGCCGGATTCTTTCCGGTACACTTTCCGAGCATTTTCTCAAAAAAGTAGGCACACCAAGACCTCTATGGAACGCTGCATCTCAAATTCTAATGACAGTTGGATATGTTTTGATGGCCATGGCAATGCCGGGTTCTCTCTACATCGGCTCGGTCATTGTCGGGATCTGCTACGGCGTCCGTCTCTCGGTCACTGTCCCCACCGCCTCTGAGCTCTTCGGTCTCAAATACTACGGTCTCATCTACAACATTCTCATCCTCAACCTCCCAATCGGATCCTTCCTCTTCTCCGGCCTCCTTGCAGGGTTTCTCTACGACATGGAAGCGACCCCGACCGAGGGCGGCGGGAACACGTGCATCGGAGGGCATTGCTACAGAATTGTGTTTGTTGTGATGGCGTTGGCTTGTGTAATTGGGTTTGTTTTGGACATTTGGTTGGCGTGTAGAACCAAACAGCTTTATTCTAAGCTTAAAGCGAACAAGAAATCAAAGAAGGGAAACAACAATAACAACTCCTAG 1632 50.86 MGSLKLPPSTTVLKWLGFVSAVWVQAISGNNYTFSNYSDSLKSLMNLTQLQLNNLSVAKDVGKAFGLLAGVACDRFPTWVILLIGSLEGLLGYGAQWLVVSQRISPLPYWQMCIFLCLGGNSTTWMNTAVLVTCIRNFRKNRGPVSGILKGYVGLSTAIFTDLCTALFSGDPSSFLLMLAFVPFAVCLFAMFFLREIPPPTTAADTQQESNYFSVFNALAVVVAVYLLCFDFIKNSGRLFSQIFSIGLLILLGSPLIIPIYTFFKSWHSNRAGSDLEARIEEPLLKEEAVAAPVKGEAEEIAEVEQRAPVIGEEHTIFEAVRTIDFWVLFVSFLCGVGTGLAVMNNMGQIGLALGYADVSVFVSLTSIWGFFGRILSGTLSEHFLKKVGTPRPLWNAASQILMTVGYVLMAMAMPGSLYIGSVIVGICYGVRLSVTVPTASELFGLKYYGLIYNILILNLPIGSFLFSGLLAGFLYDMEATPTEGGGNTCIGGHCYRIVFVVMALACVIGFVLDIWLACRTKQLYSKLKANKKSKKGNNNNNS 543
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 27012904 27017102 - CrPI670011_02g014900.1 Cre02g1490 490771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre02g1490 543 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 14 528 - GO:0016020(PANTHER)
Cre02g1490 543 CDD MFS_Mch1p_like 13 510 - -
Cre02g1490 543 Gene3D MFS general substrate transporter like domains 10 208 IPR036259 -
Cre02g1490 543 Pfam Nodulin-like 14 260 IPR010658 -
Cre02g1490 543 SUPERFAMILY MFS general substrate transporter 14 523 IPR036259 -
Cre02g1490 543 Gene3D MFS general substrate transporter like domains 323 541 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g1490 Cre-Chr2:27012904 Cre10g2113 Cre-Chr10:35730619 8.00E-86 dispersed
Cre03g0341 Cre-Chr3:1853674 Cre02g1490 Cre-Chr2:27012904 5.40E-63 transposed
Cre06g0836 Cre-Chr6:1680175 Cre02g1490 Cre-Chr2:27012904 2.40E-67 transposed
Cre07g1486 Cre-Chr7:30111729 Cre02g1490 Cre-Chr2:27012904 6.50E-70 transposed
Cre07g1592 Cre-Chr7:31415845 Cre02g1490 Cre-Chr2:27012904 4.60E-92 transposed
Cre11g1194 Cre-Chr11:9775162 Cre02g1490 Cre-Chr2:27012904 8.10E-86 transposed
Cre02g0774 Cre-Chr2:4604064 Cre02g1490 Cre-Chr2:27012904 1.20E-211 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre02g1490 - - - 0.0