Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre02g1504 ATGGCTAACGAAGAAGACGATCTCGATCTTCTCCTTTCTCTTCAAGATAAAGTTGATGAAACTCCTCCTGGAACTCCGCCTCATTCCTCAGATCTTCTATCTGACGATGAATCACCAAGACGAGCAGGTCCTGCGGATATGTCTATCTTCAGAAACGCTGTTAAAGACTGCCTTGATTATGACCACATACCAACTGAAAAGAATGGAAAAACGAACCGGTCTAAGGCCTCTAATGATGTTTCAATCGAGAAGTTTTCTGGTTTGCGAATGAGGAATCAACTGGTTGCACCTGCTGAGCTTCGCGATCGTTTTTCTGACATTCGCTTTGTTCGTTTGTCTACCATAAAGAATCTGTTGGTTGGGGACACCCTTTCAGGCTGTTGGGTAACTGTCGGAGTGCTGACTGAGAAAGGAAGTCCAAAAACAAGCTCTACAGGGAAAGCTTATTGCATCTGGAAACTTAGTTGTTTAGATGAAAACACCGTTTCTGTTTTCTTATTTGGTGACGCTTATAAAAGAAATTGCAAGGAGCTGGCTGGAACAGTTTTTGCGCTTTTTAACTCTACTGTACGAAAGGATGCAACGGGCATGGGGTTTTCTTTAAGTGTGTATCAACCAAGCCAATTGTTAAAGATGGGCACTTCAGATGACTATGGAGTATGCAAGGGGAAGAAGAAGGATGGGATTGCTTGTACAACCGTAATAAATAGGCGACGTGGCATATACTGTAAATATCATAAATCAAAGGCATCAGAAAAATATTCCACAACGACACGAACTGAGCTCAAAGGAGGGAATCTGAGGACTGCATTCAGAGATTATCATCACAAGCCAGAAGGAGTTTACATGGTAGATCCGCTAGCTGGTAAAGTGACTTCTAAGAAGCCAGCACAGCCGGTAAAACTGTTGTCTGTGGAAGGCCTGAAAAGGGCATTGAGCAATGCAGACAAAGTGACCACCAATTCACACTCACAAGGGAAAAGATTCCTTGCTGAGATCACAGGGAAACTTACTAGTAAAAGTGTAAATAAAGAATTAGCCAAACAAAGTCAGCAGAGAATCAGTTCAGAGAAGACGTCAATTTTGAAGTCATCCACCATGAAACTGGATTCAAGAGTTGAAAACCAACAACCAGATCCAAAAAGAAAGAAAACCGACCATACTCCGGTAGACAAAACCACAAAAGAAACAGGAAAGATGATAGAGTTAGATTATGTTAGTTCAGATGATGACATCGACCTTATATTCACCCGATAA 1257 41.77 MANEEDDLDLLLSLQDKVDETPPGTPPHSSDLLSDDESPRRAGPADMSIFRNAVKDCLDYDHIPTEKNGKTNRSKASNDVSIEKFSGLRMRNQLVAPAELRDRFSDIRFVRLSTIKNLLVGDTLSGCWVTVGVLTEKGSPKTSSTGKAYCIWKLSCLDENTVSVFLFGDAYKRNCKELAGTVFALFNSTVRKDATGMGFSLSVYQPSQLLKMGTSDDYGVCKGKKKDGIACTTVINRRRGIYCKYHKSKASEKYSTTTRTELKGGNLRTAFRDYHHKPEGVYMVDPLAGKVTSKKPAQPVKLLSVEGLKRALSNADKVTTNSHSQGKRFLAEITGKLTSKSVNKELAKQSQQRISSEKTSILKSSTMKLDSRVENQQPDPKRKKTDHTPVDKTTKETGKMIELDYVSSDDDIDLIFTR 418
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 27226386 27231155 + CrPI670011_02g015040.1 Cre02g1504 490785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre02g1504 418 PANTHER PROTEIN MCM10 HOMOLOG 2 385 IPR040184 GO:0003688(PANTHER)|GO:0003690(InterPro)|GO:0003697(PANTHER)|GO:0003697(InterPro)|GO:0006270(PANTHER)|GO:0006270(InterPro)|GO:0043596(PANTHER)
Cre02g1504 418 MobiDBLite consensus disorder prediction 374 396 - -
Cre02g1504 418 FunFam DNA replication licensing factor mcm10 74 248 - -
Cre02g1504 418 Pfam Primase zinc finger 213 255 IPR015408 GO:0005634(InterPro)|GO:0006260(InterPro)
Cre02g1504 418 MobiDBLite consensus disorder prediction 348 373 - -
Cre02g1504 418 Gene3D - 73 247 IPR012340 -
Cre02g1504 418 MobiDBLite consensus disorder prediction 1 44 - -
Cre02g1504 418 MobiDBLite consensus disorder prediction 348 396 - -
Cre02g1504 418 Pfam MCM10 OB-fold 84 210 IPR055065 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre02g1504 K10736 - csv:101219022 753.051