Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre02g1523 ATGTTCTCAGAGTTGATGAACTTTCTGAGAGCTTGTTTTCGACCGAGGTCGGATCGACATGTGCACAAAGGTTCCGATGCTGGTGGTCGACAGGATGGTCTCCTATGGTACAAAGATAGTGGGCAGCATGCCAATGGTGAGTTTTCAATGGCTGTAGTTCAGGCTAACAATTTACTTGAGGATCAAAGCCAGATGGAGTCGGGCAATTTGAGCTTGCACGAGGCCGGGCCATATGGTACCTTTGTTGGTGTGTATGATGGGCATGGAGGGCCCGAGACATCTCGTTATGTAAATGATCACCTTTTCCAGCATCTTAAAAGGTTTACTTCAGAGCAACAATCCATGTCAGTGGATGTCATACGGAAGGCATTTCAAGCTACCGAAGAGGGGGTCATTGCTCAAGTTTCGAAACAATGGTCAATGAGGCCACAAATTGCAGCTGTTGGATCTTGCTGCCTTGTCGGTGTAATTTGTGGTGGAACCCTTTACATTGCTAACCTTGGTGATTCACGAGCTGTTTTAGGGAGAGTTGTAAAGGCAACAGGGGAAGTTTTGTCCGTTCAGTTGTCAGCTGAGCATAATGCATCTATAGAGTCTGTGAGGCAGGAGCTCCGTGCCCTGCATCCTGATGATCCACATATTGTAGTCTTGAAGCATAATGTATGGCGCGTGAAGGGCCTTATACAGGTATCTCGATCTATTGGTGATGTCTATTTAAAGAGAGCTGAGTTCAACCGAGAGCCTCTTTATGCTAAGTTCCGCCTTCGTGAACCTATCAAAAAACCCATACTGAGTGCCGAACCATCTATTTCAGTGCTCCAATTGCAGCCACAGGATCAATTTATTATATTTGCTTCAGATGGGCTCTGGGAACACCTTAGCAATCAGGAAGCTGTTGATATTGTCCAAAACCATCCACGTAATGGAAGTGCAAGAAGGCTGGTGAAAGCAGCACTGCAAGAGGCAGCAAAGAAGAGAGAAATGAGGTACTCTGATTTGAAGAAGATTGACCGTGGTGTACGGCGACATTTCCACGATGACATCACAGTGATTGTTGTGTTTCTCGACTCAAACCTTGTAGCTTCCAACAGAGATAAAGTGGAGACAGGCATCAATCCTTTTACTATACACTATACTGAAACTCCTCAGATGAATACAGATAACATCTTCACAGAAGACAATACGGGTCAAATACGTCTTTTGAAGGGAGAAGAAGAAGCTGTTGCTGCTGCTTTAGCTTTGGCCAACAAAGAAATGGGTTGTGTTGCCTCAAAGTTAGAGGAAGAAGAAGAAGTAGTTTCCATTTGTAGAGAAAGAAAACGCCACTTAAAGTTAGCTGTTGAGAGAAGGTATGCTCTTGCAGAGGCACATTGTAAATATTGTCAAGCTTTATATGCTGTTTCAGCTGCCATTAAGCTATTTGTAGCTCGCCATTCTTCTCCTTCTCCTTTCCTCATTACATTCCCTCCTCCGTGTTCTCCTTCTCCTCCTCCTTCAGAAAAAGTTATAACCAATCCAATGTTTCTTCAGCAAATGCCTTCTGATTCCACCCATGAAGCCATACCTGCTTGCCCTTCATGTGTTTCTTCTTCTTCAACCTCTACAGAATCCTCCATTGAAGAAAGAGAAGAAGAATCAGTAGAAGAGGAGAGGATTGAACAAGTCCCTCCATATTTCTACATGCAAATGCCACCCCCAATGCCATCTCCTCAGAGGGAGTTTGGATGGGATTTCTTCAATCCATTTGACACAATGAGGACCGATGTCATCGGCGAATATCGTGAGGACGAGCTCAGGATGGTGAGGGAGGAAGAAGGAATTCCAGAGCTGGAAGAGGCTGAGGTAGAGAAAGAAGAGCAAAACCAGAGAGTTGTGGCTGTTGCTGAGGAGGAAGATGTTGGAGCTTTTAAAGAGCAGAGGAATGGAGTTGAGATGGTTAAAGTTGGAGAGAAGGAAGATGAAGGTCAAATGAGGCAGAAAGGGCTAACAGTCATTGATACACCAGTGGAAGGAAGGGAACTTTTGGAAGCATTGCAAGATGTTGAGGATTATTTCATTAGGGCTTATGATTCTGGAATTGATGTTTCTAGGATGTTAGAGGCCAACAAAATTCAGCTTCAGTCTGGTTTAGAAGAAATAAAAGAGAACTCGACAAAACTCATCCAAGCAATAACTTGGCACCGGTCTGCTTCGGGCAAGCCTTCATCATGTAAGAGTCTAGTAGCATCAAGTTCGAAAGGTTCTTCAGCATGGACAGAGTTTAAAAATGAGCTGTTCGATGATTACGACGTAATGGACTCAGGAAGCCATTCATCGACTCTCGGACGACTATATGCTTGGGAGAAGAAGCTCTACGAAGAGGTCAAGGCTGGGGACAGCATGCGCAAACTGTACGAGAAAAGGTGTTCACGACTAAGAAACCAGGATATTAAAGGGGACAATGGAGTTGCTACTGATAAAACTCGAGTTGCAGTAAAAGATTTATATGCCAGGATATTGGTCGCCATTCGGAGTGCTGAATCAATCTCGACGAGAATTGAGAAACTAAGAGACGACGAGCTACAACCTCAGATTGTCGAGCTGTTAAAAGGCTTAACAAGAACATGGAAAATCATGATGGAAGTTCATGAAACCCAGAAAAGGATTATCCTTGAAGTGAAGACTTATTCCTGCCATTCCTATCTGAAATTCTGTAACGAATCTCATCGTCTTGCAACTCTTCAGCTTGGGGCCGAGCTTCAGAATTGGCGTTCGTGTTTTTCAAAATACGTTGAATCACAAAAGGGTTATGTTGAAGCTCTCCATGGATGGCTGACCAAGTTTGTAGTGCCTGAGGTTGAGTTCTATTCTCAGGGTCGAGCGTCGGCTGTGCCTTATGGGCTGCACGGACCTCCATTGCTTTCAATCTGCCATGATTGGCTATCTTCCATGGAAAAGTTACCTGATAAACCAGTAGCCTTTGCATTGAAAAGCTTTGCAAAGGATATGAAAGCTCTATCAGATAAACAGATGGAGGAGCAGCACCAAAAGAGAAGAGTTGAAAGTCTCGGAAGGGAACTCGACCGAAGGATCCTGTCACTCCAGAAAACGGAGAACAAGTTCTTCGAGTTCAACTTTACCGAGATGAAATCAGAGCTGGAAATGGAAAATCAGAACGAGTACTTAACAGAAAAGAAAGATCAGCTGGACATGTTCAGGAAGAAGCTTGATTTGGAGAAGGAAAAACACAATAACTGCATTCAAGAAGCACAGAGGATTACATTAAATGGAATCCAAACAGGGTTTTCTGCGGTTTTTGAATCCTTATCAGAATTCTCCAAGGCATCCCAAATAATGTACGACCACCTCGTGAATTATAGTGAGAATGCCAATAAATCCGAAAACATAAACTATATCGAGGGCTCCTCTCAAACCAAAGAAAATGTTAGCAGATAG 3435 43.7 MFSELMNFLRACFRPRSDRHVHKGSDAGGRQDGLLWYKDSGQHANGEFSMAVVQANNLLEDQSQMESGNLSLHEAGPYGTFVGVYDGHGGPETSRYVNDHLFQHLKRFTSEQQSMSVDVIRKAFQATEEGVIAQVSKQWSMRPQIAAVGSCCLVGVICGGTLYIANLGDSRAVLGRVVKATGEVLSVQLSAEHNASIESVRQELRALHPDDPHIVVLKHNVWRVKGLIQVSRSIGDVYLKRAEFNREPLYAKFRLREPIKKPILSAEPSISVLQLQPQDQFIIFASDGLWEHLSNQEAVDIVQNHPRNGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDSNLVASNRDKVETGINPFTIHYTETPQMNTDNIFTEDNTGQIRLLKGEEEAVAAALALANKEMGCVASKLEEEEEVVSICRERKRHLKLAVERRYALAEAHCKYCQALYAVSAAIKLFVARHSSPSPFLITFPPPCSPSPPPSEKVITNPMFLQQMPSDSTHEAIPACPSCVSSSSTSTESSIEEREEESVEEERIEQVPPYFYMQMPPPMPSPQREFGWDFFNPFDTMRTDVIGEYREDELRMVREEEGIPELEEAEVEKEEQNQRVVAVAEEEDVGAFKEQRNGVEMVKVGEKEDEGQMRQKGLTVIDTPVEGRELLEALQDVEDYFIRAYDSGIDVSRMLEANKIQLQSGLEEIKENSTKLIQAITWHRSASGKPSSCKSLVASSSKGSSAWTEFKNELFDDYDVMDSGSHSSTLGRLYAWEKKLYEEVKAGDSMRKLYEKRCSRLRNQDIKGDNGVATDKTRVAVKDLYARILVAIRSAESISTRIEKLRDDELQPQIVELLKGLTRTWKIMMEVHETQKRIILEVKTYSCHSYLKFCNESHRLATLQLGAELQNWRSCFSKYVESQKGYVEALHGWLTKFVVPEVEFYSQGRASAVPYGLHGPPLLSICHDWLSSMEKLPDKPVAFALKSFAKDMKALSDKQMEEQHQKRRVESLGRELDRRILSLQKTENKFFEFNFTEMKSELEMENQNEYLTEKKDQLDMFRKKLDLEKEKHNNCIQEAQRITLNGIQTGFSAVFESLSEFSKASQIMYDHLVNYSENANKSENINYIEGSSQTKENVSR 1144
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 27503923 27514959 + CrPI670011_02g015230.1 Cre02g1523 490804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre02g1523 1144 MobiDBLite consensus disorder prediction 519 536 - -
Cre02g1523 1144 SUPERFAMILY PP2C-like 59 356 IPR036457 -
Cre02g1523 1144 SMART PP2C_4 39 353 IPR001932 -
Cre02g1523 1144 Pfam Protein of unknown function (DUF630) 419 478 IPR006868 -
Cre02g1523 1144 Gene3D - 36 367 IPR036457 -
Cre02g1523 1144 Pfam Protein of unknown function (DUF632) 674 997 IPR006867 -
Cre02g1523 1144 CDD PP2Cc 48 355 IPR001932 -
Cre02g1523 1144 ProSiteProfiles PPM-type phosphatase domain profile. 47 355 IPR001932 -
Cre02g1523 1144 ProSitePatterns PPM-type phosphatase domain signature. 81 89 IPR000222 GO:0043169(InterPro)
Cre02g1523 1144 FunFam Phosphatase 2C family protein 36 365 - -
Cre02g1523 1144 Coils Coil 610 630 - -
Cre02g1523 1144 MobiDBLite consensus disorder prediction 519 551 - -
Cre02g1523 1144 PANTHER UNCHARACTERIZED 419 1123 - -
Cre02g1523 1144 Pfam Protein phosphatase 2C 78 323 IPR001932 -
Cre02g1523 1144 Coils Coil 1055 1075 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g1523 Cre-Chr2:27503923 Cre04g1677 Cre-Chr4:35085522 4.80E-173 dispersed
Cre02g1020 Cre-Chr2:7854427 Cre02g1523 Cre-Chr2:27503923 1.10E-110 transposed
Cre02g2719 Cre-Chr2:40353612 Cre02g1523 Cre-Chr2:27503923 8.70E-58 transposed
Cre04g1663 Cre-Chr4:34976448 Cre02g1523 Cre-Chr2:27503923 2.80E-53 transposed
Cre06g1210 Cre-Chr6:5983263 Cre02g1523 Cre-Chr2:27503923 8.50E-119 transposed
Cre10g1870 Cre-Chr10:33280439 Cre02g1523 Cre-Chr2:27503923 5.20E-119 transposed
Cre11g1624 Cre-Chr11:27085775 Cre02g1523 Cre-Chr2:27503923 1.00E-65 transposed
Cre02g0750 Cre-Chr2:4340037 Cre02g1523 Cre-Chr2:27503923 5.50E-169 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre02g1523 - - - 0.0