Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre02g1531 ATGAGAGCTCATCGTTTGAGCTTCTTCACTTCCTTTATATTTTTATTCCCTACATTCATCACAGCCACAGGCTTCACGCTTCTCCACGATTCCTCCATTTCCTACAGGAGAATTCTGCATCAGCCGCTCTTTCCGGTTGCCTCTGAGCCGCCGCCTGACATTGACTTGTCTCCACCGCCCCCGCCGCCGGATTCTCCTTCCGACGATCAGCCGTTTTTCCATGAGCTGCCCACCAGTCCAGATCAGAGTCAACCTCCTCCTTCCTCATCTAATGGAACTATGCCAATCCCTGCCTCTACGGCGCAACCGTCCAAGCCCACCAAGACTGTTGCAATTGCCATTTCCGTTGGGATTGTGACTTTGGGGATGCTTTCAGCTCTCGCTTTCTTTTTGTATCGTCACCGTGCGAAGCATCCGGGGGAGTCGCAGAAGCTTGTTGGAGGGAATAATCCGGAGAGATTTGTGGAGGACTCGAGAGCGCCGCCCTCGAGTTTTTTCTATATCGGAACTGTTGAGCCGAGTCAGAGCTCTATTGTGGAGCAGAATGGTGCCAATGGTGCTAACAGTTCGCCTTATCGCAAGCTGAATTCGATTAAGAGGTCGGATCGGTATCGTCCGAGTCCAGAGTTGCAGCCACTGCCGCCACTGCCAAAACCACCGGTGGCTATGTCGCCTCCGGCTTTGTCGTCTTCCGATGAGGAAAGCCAGGACACGGCATTTCATACTCCGCAATGCTCGTCGATTGTTAGTCACGATGATGGCTATTTTTCACCGGCTTCTCGTCGGAGTAATTCGGTTAAGAGCTGTTCCACGGCAAGTTTCAAGAATGACCATATGAATTCCAATCCTCCTCCCATTCCTCATTCCAAAAGGACGTCTCCTAAATCGAGATTTTCGGTTTCTTCGACGAAGCGCACTTCGTCTCAGCCTCAGCCACCGCCGCCGCCGCCTCCTCCACCACGTCCGTTTGATGATTTTCGCGAAATTCCGAATTCGAAAGAGACAATGCCTTTCTCGTCCACGAGACCTAAATTTTCGAAGCCTCCGCCTCCGCCGAATTTGGCGCTTCTTCAAACAATTAGCAATTCGACCACATTTCCTCAAGTTCCACAACCTGCTGTAGCTCCACCTCCGCCTCCACCTCCACCTCCGCCGCCCCCACCCCCACCCCCACCTCCACCTCCGCGACCACCGGCGCGTCCGGCCTCCTATTCGACGCCACAAAAACTAGGGTTATCAGAAACCAGAATGTCGGCAGTCACTCCTCCAGACTCCTCTAAGTCACAATCCTACTCAACAGCGAGGTCAAACTCTTCCCCGAAATCCACACCTAGTTCTGTGACAACAAATTCTGCTAAAGAAGACGTTGCCCCGAGGATTAATTCTATGGAGAGGCTCGAAGCAGAGGATGCAGAAGGTGCAAAACCGAGATTGAAGCCCTTGCACTGGGACAAAGTACGAGCAACCTCAGACCGAGCTACAGTTTGGGATCAACTTAAATCAAGCTCATTCCAATTAAACGAGGACATGATGGAGACACTGTTCGGCTTCAATTCTGCAAATTCTGTTCCCAAAGAGGCCACGAGGAAGTCTGTTCTTCCCCCCGTTGAGAAGGAAAATAGGGTATTGGACCCAAAAAAGTCTCAGAACATAGCAATACTTCTAAGAGCACTTAATGTCACGCGCGATGAGGTGATCGAAGCTCTTCAAGATGGTAACCCAGAAGGCTTTGGTACTGAGCTCTTAGAAACTCTTGTAAAGATGGCTCCAACCAAAGAGGAAGAGATAAAACTCAGAGAGTACTGTGGTGATGTTTCAAAATTAGGGACTGCAGAAAGATTTCTCAAGGCAGTGCTTGAAGTTCCATTTGCCTTTAGAAGAGTTGAGGCAATGCTGTACAGAGCCAATTTTGATTCAGAAGTGAAGTACCTAAGGAAATCTTTCCAAACCCTTGAGGGTGCAAGTGAAGAATTGAAGAACAGTAGACTTTTTCTTAAACTCCTTGAAGCGGTTCTTAAGACAGGAAATAGGATGAATGTTGGTACGAATCGTGGTGATGCTAAAGCCTTTAAGCTTGAAACCCTCTTAAAATTAGTCGATATAAAGGGAACGGATGGGAAGACAACATTGCTTCATTTTGTTGTTCAAGAAATCATCAGATCAGAAGGTGGTGCTGATTCAACTAATGACAACCTTCAACCCCGTTCGCAAGCTAAAATCGAGGATGAATTCAGAAAGCAGGGCTTGCAAGTTGTGGCTGGACTAAGCAGAGACCTCACCAATGTAAAAAAAGCGGCAGGGATGGACTCAGACGTATTGAGCAGTTATGTCACAAAGCTCGAGATGGGGCTTGAAAAAGTAAGGTTGGTTTTGCAATTTGAAAGGCCAGGAATGCAGGGAAAATTCTTCAACTCAATGAAAACATTCTTGAAAGAGGCAGAAGAGGAAATAGTCAGGATTAAAGCTGACGAAAGGCAAGCTTTATCGCTTGTGAAAGCAGTCACGGAGTATTTCCATGGTGATGCTGCTAAGGAGGAAGCACATCCCTTCCGAATATTCATGATCGTTCGGGATTTCCTAACTGTACTGGATCAAGTATGCAAAGAAGTTGGGAGAATGCAAGACGGAGTAATGGTTGGTGCTGCCAGATCCTTTCGGATATCTGCTACAGCCTCACTCCCAGTCCTCAGCAGGTATAACGTCAGACACGACCGAAGCTCCGACGAGGATAGCTCATCTCCATGA 2745 48.38 MRAHRLSFFTSFIFLFPTFITATGFTLLHDSSISYRRILHQPLFPVASEPPPDIDLSPPPPPPDSPSDDQPFFHELPTSPDQSQPPPSSSNGTMPIPASTAQPSKPTKTVAIAISVGIVTLGMLSALAFFLYRHRAKHPGESQKLVGGNNPERFVEDSRAPPSSFFYIGTVEPSQSSIVEQNGANGANSSPYRKLNSIKRSDRYRPSPELQPLPPLPKPPVAMSPPALSSSDEESQDTAFHTPQCSSIVSHDDGYFSPASRRSNSVKSCSTASFKNDHMNSNPPPIPHSKRTSPKSRFSVSSTKRTSSQPQPPPPPPPPPRPFDDFREIPNSKETMPFSSTRPKFSKPPPPPNLALLQTISNSTTFPQVPQPAVAPPPPPPPPPPPPPPPPPPPPRPPARPASYSTPQKLGLSETRMSAVTPPDSSKSQSYSTARSNSSPKSTPSSVTTNSAKEDVAPRINSMERLEAEDAEGAKPRLKPLHWDKVRATSDRATVWDQLKSSSFQLNEDMMETLFGFNSANSVPKEATRKSVLPPVEKENRVLDPKKSQNIAILLRALNVTRDEVIEALQDGNPEGFGTELLETLVKMAPTKEEEIKLREYCGDVSKLGTAERFLKAVLEVPFAFRRVEAMLYRANFDSEVKYLRKSFQTLEGASEELKNSRLFLKLLEAVLKTGNRMNVGTNRGDAKAFKLETLLKLVDIKGTDGKTTLLHFVVQEIIRSEGGADSTNDNLQPRSQAKIEDEFRKQGLQVVAGLSRDLTNVKKAAGMDSDVLSSYVTKLEMGLEKVRLVLQFERPGMQGKFFNSMKTFLKEAEEEIVRIKADERQALSLVKAVTEYFHGDAAKEEAHPFRIFMIVRDFLTVLDQVCKEVGRMQDGVMVGAARSFRISATASLPVLSRYNVRHDRSSDEDSSSP 914
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 27636147 27640074 + CrPI670011_02g015310.1 Cre02g1531 490812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre02g1531 914 Coils Coil 810 830 - -
Cre02g1531 914 MobiDBLite consensus disorder prediction 208 224 - -
Cre02g1531 914 Pfam Formin Homology 2 Domain 473 863 IPR015425 -
Cre02g1531 914 PANTHER FORMIN-RELATED 347 908 IPR027643 GO:0003779(InterPro)|GO:0030036(InterPro)|GO:0045010(InterPro)|GO:0051015(InterPro)
Cre02g1531 914 MobiDBLite consensus disorder prediction 49 106 - -
Cre02g1531 914 MobiDBLite consensus disorder prediction 458 473 - -
Cre02g1531 914 MobiDBLite consensus disorder prediction 370 402 - -
Cre02g1531 914 ProSiteProfiles Formin homology-2 (FH2) domain profile. 468 889 IPR015425 -
Cre02g1531 914 MobiDBLite consensus disorder prediction 406 456 - -
Cre02g1531 914 MobiDBLite consensus disorder prediction 85 106 - -
Cre02g1531 914 MobiDBLite consensus disorder prediction 228 307 - -
Cre02g1531 914 Gene3D Formin, FH2 domain 462 874 IPR042201 -
Cre02g1531 914 SUPERFAMILY Formin homology 2 domain (FH2 domain) 385 874 - -
Cre02g1531 914 SMART it6_source 468 878 IPR015425 -
Cre02g1531 914 MobiDBLite consensus disorder prediction 308 325 - -
Cre02g1531 914 MobiDBLite consensus disorder prediction 198 473 - -
Cre02g1531 914 MobiDBLite consensus disorder prediction 49 68 - -
Cre02g1531 914 PRINTS Proline rich extensin signature 330 346 - -
Cre02g1531 914 PRINTS Proline rich extensin signature 200 212 - -
Cre02g1531 914 PRINTS Proline rich extensin signature 214 230 - -
Cre02g1531 914 PRINTS Proline rich extensin signature 301 322 - -
Cre02g1531 914 PRINTS Proline rich extensin signature 365 390 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g1531 Cre-Chr2:27636147 Cre07g0601 Cre-Chr7:3841222 2.00E-145 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre02g1531 K28090 - csv:101208011 1440.25