Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre02g1670 ATGATACTCTCAGAGCCCCCAAAGAGTAACAACGCCACCAAATTAATGCACATCAAACAATTCTTTGGCTTCTCTCACTCCTCTTCTTCTAAATCCCTCCACTCCTCTTCTTCCTTTCCCAACTCCGCCCGCCGGAGACTCCCGCCGTCCAGCTATGACCCTTCCCTGTCGGCGGCCATGGAAGAGGCCATCATTAACTCCGAACCCATCATCACCAAATGGGACCCTGATTCTTCTGAGTTCAACAGAATCACCTTCCTCTTCCGCCATGGCCGAGCCGAATCCGACGAGTTCCTCAACTCCGTCAACAGCCTCCGACGAGCAATGGACTTTTTCATATTGGCAAATTCCACCTCATCCGTCCTTGTTATTGCTCAGAAGTTGATGCAGGCCGCCATGAGACGACTCGAGAAGGAATTTTACCAAATTTTGAGTGAGAATCGCCAGAATCTAGACCCTGAATCCATCTCCAGCACGTCCTCCGACCGGTCGACGGTCGAAGGAGAAACCGTTGGGGATTCCGTCGCCGAGTTCGATAGAGTTTCGGCCGATTTGAAATCGATTGCGGATTGTATGATTGATTCTGGGTATGGGAAAGAGTGTGTTAAAATCTATAAAGTAATCCGAAAATCGATTGTTGATGAAACTCTGTGCCACCTTGGAACAGAGAAATTCAAAATTTCGAGAATTCTGAAATGGAATTGGGATTCGCTCGAGCAGATAATCAAGACTTGGATGAATTCGGTTAAGATCGCTGTGAATACTCTGTTTCGTGGCGAGAAAATTCTGTGCGACCATGTTTTTTCGAGATCGGAAAGAATCAGAGAGTCCTGTTTTTCTGAGATCACAAAAGAAGGTGCAATCACTTTGTTTAAATTCCCGGAATTAGTCGCAAAAGGGAAGAAAGATTCCAACAAAATCTTTCTATTAATGGAGTTTCACGAGGCGAATTCCGACGTATTGCCGGAAATTGAAGTCATATTCGACTCTGTTTCAACTTCCGCCATTATAACGCAGGCTCAAACATCGATGGCGAAACTCGCGGATTCAATCCGCGACATTCTTTCTGAATTTGAATCATCAATTCAAAGAGATTCATCCAAAAATCCGACCCCCGGCAGCGGAATCCACCCACTAACCCGATCAGCAATGAGCTACATCTCGTCTCTTGGCGATTACGCCGGTACCCTCTCCGACATCCTCACCGTTGAAAACTCTCTGATTCCACCGTCGTACATGGAAACCATCGCCGCCGACGATGCACTGTCGTCGCCAGTGGCGGCGCAACTGGGGTGGCTGATTCTAGTCCTTCTCTGCAAACTAGACACAAAAGCAGCGGTGTACAGAGACATATCGTTATCGTATTTATTCCTAGCGAACAATTTGAATTTCATTGTGAAGACGGTGGCGACAACAAATCTAAAGACGCTAATCGGCAGCGAGTGGGTGGCGAATCACCAGAGCAAAGTGAAGGTGTATGCAGCGAATTACGAAACGACGGCGTGGAACAGAGTGATGAAGTCGTTGCCGGAGGGGGAGTCGGAGGAAGTGGGGTCGGCGGCGGAAGGGTTCAAGAGGTTTAATGCGGCGTTTGAAGAAGCGTATCGGAAGCAGAGGTCGTGGAGAGTGGAGGATGGAAATTTGAGAGACGAATTGAAGATGTCGATAGCCAAGAAAATTCTGCCGATTTACAGAGAGTTTTACGATGGGTGTATTGAGAAAGTGAATGTGGGTGTCAGATTTTCGCCGGATGATTTGGGGAATTATTTGTCGGATTTGTTTCATGGAGTTTCTTCATCGGCAACTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGTAA 1848 47.08 MILSEPPKSNNATKLMHIKQFFGFSHSSSSKSLHSSSSFPNSARRRLPPSSYDPSLSAAMEEAIINSEPIITKWDPDSSEFNRITFLFRHGRAESDEFLNSVNSLRRAMDFFILANSTSSVLVIAQKLMQAAMRRLEKEFYQILSENRQNLDPESISSTSSDRSTVEGETVGDSVAEFDRVSADLKSIADCMIDSGYGKECVKIYKVIRKSIVDETLCHLGTEKFKISRILKWNWDSLEQIIKTWMNSVKIAVNTLFRGEKILCDHVFSRSERIRESCFSEITKEGAITLFKFPELVAKGKKDSNKIFLLMEFHEANSDVLPEIEVIFDSVSTSAIITQAQTSMAKLADSIRDILSEFESSIQRDSSKNPTPGSGIHPLTRSAMSYISSLGDYAGTLSDILTVENSLIPPSYMETIAADDALSSPVAAQLGWLILVLLCKLDTKAAVYRDISLSYLFLANNLNFIVKTVATTNLKTLIGSEWVANHQSKVKVYAANYETTAWNRVMKSLPEGESEEVGSAAEGFKRFNAAFEEAYRKQRSWRVEDGNLRDELKMSIAKKILPIYREFYDGCIEKVNVGVRFSPDDLGNYLSDLFHGVSSSATPSSSSSSSSSSSS 615
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 29682686 29684533 - CrPI670011_02g016700.1 Cre02g1670 490951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre02g1670 615 Gene3D Exocyst complex component Exo70 71 603 - -
Cre02g1670 615 MobiDBLite consensus disorder prediction 152 171 - -
Cre02g1670 615 Pfam Exocyst complex component Exo70 N-terminal 68 146 - -
Cre02g1670 615 MobiDBLite consensus disorder prediction 152 168 - -
Cre02g1670 615 MobiDBLite consensus disorder prediction 26 54 - -
Cre02g1670 615 PANTHER EXOCYST COMPLEX PROTEIN EXO70 41 596 IPR004140 GO:0000145(PANTHER)|GO:0000145(InterPro)|GO:0006887(PANTHER)|GO:0006887(InterPro)
Cre02g1670 615 MobiDBLite consensus disorder prediction 26 45 - -
Cre02g1670 615 SUPERFAMILY Cullin repeat-like 69 595 IPR016159 -
Cre02g1670 615 Pfam Exo70 exocyst complex subunit C-terminal 243 592 IPR046364 GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g1670 Cre-Chr2:29682686 Cre03g0511 Cre-Chr3:3644108 1.30E-137 dispersed
Cre11g1086 Cre-Chr11:8328636 Cre02g1670 Cre-Chr2:29682686 4.60E-25 transposed
Cre10g2192 Cre-Chr10:36441995 Cre02g1670 Cre-Chr2:29682686 1.80E-140 wgd
Cre02g1670 Cre-Chr2:29682686 Cre04g0947 Cre-Chr4:28134729 7.90E-98 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre02g1670 K07195 - csv:101221801 1027.31