Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre02g1689 ATGGCGACTTCGACACTGGGCGGCACCATAGGCTTCTCCCAGCCCTCGTCTTCCTCGCATATCTCAGTTTATTGCATTCCCTTTTCAACCAGCAGATTCAGTTTCTCGAGGACCATTCTTTCTCCTCTTAAGCTTGAAAAACCACCATCTGGAAGAAGAGCCAGAGCTGTAATTGCTGTGAAAATGGCTGCTGAGGCTTTTCAGGAAGTTTTTCCTCCAGCCCTCACTTCAGCTTCAGAACCACCTCCTCTCTTTGATGGAACAACGAGGCTTTACATATCTTATACATGCCCTTATGCGCAGCGTGTGTGGATTACTCGGAATTGTAAGGGTTTGCAGAATAAGATACAATTGGTTCCAATAAATCTACAGGATAGGCCATCTTGGTACATGGAAAAAGTTTACCCACCTAACAAGGTGCCAGCTCTTGAACATAATAATGAGGTCAAAGGAGAGAGTCTTGACTTAATTAAATATATTGACAGCAATTTTGAAGGGCCTTCATTATTTCCTGATGATCCGGGAAAGCGAGAGTTTGCTGAAGAGCTGATAGACTACGTGAACTCTTTCACGAAATCTGTGGTTTCTTCATTTAAAGGAGATGGAAATGAAGCTGATGTGGCATTTGACTACATCGAATCTGCTCTTTCAAAATATGGAGATGGCCCGTTTTTTCTAGGCCAGTTTAGTCTGGTGGATATAGCTTATGCTCCGTTTATTGAAAGGTTTCAGCCGTTCTTATTAGAAGTAAAAACATATGACATCACTGCTGGCAGGCCAAAACTAGCAGCTTGGATTGAGGAGATGAACAAGATCGAAGGGTACCGAAAAACAAGGGGCGATCCACGGGAACATGTTGATAGCTATAAGAAGCGATTCTTGAGCCGTTTGTGA 894 43.29 MATSTLGGTIGFSQPSSSSHISVYCIPFSTSRFSFSRTILSPLKLEKPPSGRRARAVIAVKMAAEAFQEVFPPALTSASEPPPLFDGTTRLYISYTCPYAQRVWITRNCKGLQNKIQLVPINLQDRPSWYMEKVYPPNKVPALEHNNEVKGESLDLIKYIDSNFEGPSLFPDDPGKREFAEELIDYVNSFTKSVVSSFKGDGNEADVAFDYIESALSKYGDGPFFLGQFSLVDIAYAPFIERFQPFLLEVKTYDITAGRPKLAAWIEEMNKIEGYRKTRGDPREHVDSYKKRFLSRL 297
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 29929566 29934458 + CrPI670011_02g016890.1 Cre02g1689 490970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre02g1689 297 PANTHER GLUTATHIONE S-TRANSFERASE L1 62 296 IPR044629 GO:0004364(InterPro)|GO:0004364(PANTHER)|GO:0010731(PANTHER)
Cre02g1689 297 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 87 168 IPR004045 -
Cre02g1689 297 SFLD Main (cytGST) 90 271 - -
Cre02g1689 297 CDD GST_C_Lambda 173 290 - -
Cre02g1689 297 SUPERFAMILY GST C-terminal domain-like 164 293 IPR036282 -
Cre02g1689 297 Gene3D Glutaredoxin 62 165 - -
Cre02g1689 297 FunFam Glutathione S-transferase L2, chloroplastic 62 165 - -
Cre02g1689 297 Pfam Glutathione S-transferase, C-terminal domain 208 267 - -
Cre02g1689 297 SFLD Glutathione Transferase (cytosolic) 90 271 IPR040079 -
Cre02g1689 297 Gene3D - 166 297 - -
Cre02g1689 297 Pfam Glutathione S-transferase, N-terminal domain 91 167 IPR004045 -
Cre02g1689 297 SUPERFAMILY Thioredoxin-like 78 169 IPR036249 -
Cre02g1689 297 FunFam Lambda class glutathione S-transferase 166 296 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g1689 Cre-Chr2:29929566 Cre10g2181 Cre-Chr10:36357397 8.30E-85 dispersed
Cre10g2180 Cre-Chr10:36333897 Cre02g1689 Cre-Chr2:29929566 5.30E-89 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre02g1689 K00799 - csv:101220995 530.791