Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre02g1692 | ATGGGATGGTTTCTCTGTTCTGGAAGTTCAAATAAGAAGGAAAAACATCAGCAGCTGCAGGTTCAGAAGAAGGACAATGATCCGATCCCATCAACTTCAGAAAAATTGATGGTAAAGCCGACATTTAATGGGAAGAACGAGGCTCTGAAAGATGGAGGTTCTGATCAAATTGCAGCACAAACAATTACATTCTCATTCCGAGAGTTGGCAGCTGCAACAAAGTATTTTAGAGCCGACTGTCTTTTGGGTGAAGGAGGTTTTGGTCAAGTTTATAAAGGACGATTGGAGAGCATAAATCAGGTAGTTGCCATCAAGCAACTTGATCGAAATGGGCTACAAGGAAACAGGGAATTTCTCGTTGAAGTACTAATGTTAAGCCTACTCCATCACCCAAATCTTGTTAATTTAATTGGCTATTGTGCGGATGGTGATCAAAGACTTTTGGTTTATGAATACATGCCATTGGGATCGTTGGAAGACCATTTACATGATCTCCCACCTGATAAAAGACGACTTGACTGGAATACAAGAATGAAAATAGCTGCTGGTGCTGCAAAGGGCTTAGAGTATTTGCATGACAAAGCTAACCCCCCAGTTATATATCGTGATCTGAAATGCTCTAACATCCTGCTTGGTGAAGATTACCATCCTAAGCTTTCCGATTTTGGCTTGGCAAAATTAGGCCCCGTGGGGGATAACACTCATGTGTCCACAAGAGTGATGGGAACATATGGATACTGTGCTCCTGAGTATGCAATGACAGGCCAGCTCACTTTAAAATCAGATGTTTATAGCTTTGGAGTTGTTCTACTCGAAATTATTACTGGGAGAAAAGCTATTGACAATTCAAGAGCCGCAGGGGAACATAATTTGGTGGCATGGGCTCAACCCTTATTTAAAGACAGAAGGAAATTTTCGCAGATGGCCGATCCATTGCTCCAAGGACAATACCCAGTCAGAGGCTTATATCAAGCTCTTGCAGTAGCTGCAATGTGTGTTCAGGAACAGCCTCATATGCGACCCCTTATTGCTGATGTTGTCACAGCCCTTTCATATCTTGCTTCCCAAAAATACAACCCGGAAACTCAGCCAGTTCAAAGCGCTCGCAGTAGCTCGTCCACACCTAGGTCTTCTAGAAGAGAACTGTGA | 1149 | 42.91 | MGWFLCSGSSNKKEKHQQLQVQKKDNDPIPSTSEKLMVKPTFNGKNEALKDGGSDQIAAQTITFSFRELAAATKYFRADCLLGEGGFGQVYKGRLESINQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKRRLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEDYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNSRAAGEHNLVAWAQPLFKDRRKFSQMADPLLQGQYPVRGLYQALAVAAMCVQEQPHMRPLIADVVTALSYLASQKYNPETQPVQSARSSSSTPRSSRREL | 382 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 29975035 | 29979238 | + | CrPI670011_02g016920.1 | Cre02g1692 | 490973 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre02g1692 | 382 | FunFam | Serine/threonine-protein kinase PBS1 | 153 | 368 | - | - | |
Cre02g1692 | 382 | Pfam | Protein tyrosine and serine/threonine kinase | 80 | 347 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cre02g1692 | 382 | FunFam | Serine/threonine-protein kinase PBS1 | 47 | 152 | - | - | |
Cre02g1692 | 382 | SUPERFAMILY | Protein kinase-like (PK-like) | 64 | 371 | IPR011009 | - | |
Cre02g1692 | 382 | MobiDBLite | consensus disorder prediction | 1 | 31 | - | - | |
Cre02g1692 | 382 | CDD | STKc_IRAK | 82 | 350 | - | - | |
Cre02g1692 | 382 | Gene3D | Transferase(Phosphotransferase) domain 1 | 153 | 374 | - | - | |
Cre02g1692 | 382 | MobiDBLite | consensus disorder prediction | 361 | 382 | - | - | |
Cre02g1692 | 382 | Gene3D | Phosphorylase Kinase; domain 1 | 49 | 152 | - | - | |
Cre02g1692 | 382 | PANTHER | OS07G0668900 PROTEIN | 15 | 374 | - | - | |
Cre02g1692 | 382 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 199 | 211 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cre02g1692 | 382 | MobiDBLite | consensus disorder prediction | 361 | 375 | - | - | |
Cre02g1692 | 382 | SMART | serkin_6 | 76 | 353 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre02g1692 | 382 | ProSiteProfiles | Protein kinase domain profile. | 76 | 353 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre02g1692 | 382 | ProSitePatterns | Protein kinases ATP-binding region signature. | 82 | 105 | IPR017441 | GO:0005524(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre02g1692 | Cre-Chr2:29975035 | Cre05g0718 | Cre-Chr5:6341480 | 2.40E-161 | dispersed | |
Cre10g2179 | Cre-Chr10:36331013 | Cre02g1692 | Cre-Chr2:29975035 | 4.10E-164 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
63876 | PF07714 | PK_Tyr_Ser-Thr | 1.90E-46 | CL0016 | Cre | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre02g1692 | - | - | - | 0.0 |