Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre02g1790 ATGGCTACCAATAATCTAAACAAAGAGCTGTCAAAGAAAACGAACATATTTGGACTAAAAGTATGGGAAGTGATTGGAATTGGAGTAGGCCTATTCATAATCTCAATCCTCTGTATACTCTCACTATGTTTAACCTCATTCAACAAGAAGTCAAAAAAATCATCATCATCATCACCCAACTCCAACACCTTATTCCCTCTCACTCAAATCCCATCTCATTCAAAAGACATAAAGGCAGTTCACATAACAACTACTCACAAAAAGCCAACAACTCAAATGGGAAAATTTGAAACCAATAATAATTACAGCAGTGAATCGGGATCATTGTTTCATCCATTGAGTTATGGCTATGGATCACAATCAGGGGATGAAGGCAGCTCAGGCACCATCACGACGACAACAATGTACCGACGTTCGACGTCGCCTACTACGACGATGGCTCCTTCGCCGTTGTCGTGTATGCCGGAGATGTCGCAATTGGGGTGGGGGTATTGGTTTACTTTGAGAGAGCTGGATTTGGCTACTAATTTGTTCTCAGAAGAGAATTTGATTGGAGAAGGAGGGTATGGAGTTGTGTTTAGAGGGAAGTTGTTGAATGGGACACCAGTGGCAGTTAAGAAGATTTTGAATGGACAGGGCCAAGCTGAGAAGGAATTCAGAGCGGAAGTTGAGGCAATTGGGCATGTAAGACATAAGAATCTTGTTCGTCTTTTGGGATATTGCATTGAAGGGACTCACAGGATGCTGGTGTATGAGTATATAAACAATGGAAGCTTAGAGCTATGGCTACATGAAGGAATGGGAGAGAATAGATATCTTACATGGGAGGCTCGAATGAAGATCATGTTGGGGACAGCCAAAGGAATTGCATACTTACACGAAGCCATTGAGCCAAAGGTGGTACATCGAGACATAAAGGCTAGCAACATACTTATAGATGAAAATTTCAATGCTAAAGTATCAGATTTTGGGCTAGCAAAGTTGATGGATGCTGGCAAAACTCATGTCACAACAAGAGTTATGGGTACATTTGGTTATGTGGCTCCTGAATATGCTAACACTGGACTTCTAAATGAGAAGAGCGACGTGTATAGCTTTGGAGTTGTGCTGGTGGAAACAATCACGGGAAGAGATCCAGTGGACTATGGACGTCCGCCCAAACAGGTGAATGTAGTAGATTGGCTGAAAATGATGATTGGAAGTAGAAGATGTGAAGAAGTGGTGGACACAAAATTAGGGGTTGGAGGAAGGCCATCCACAAGAGGGTTGAAAAGAGTTCTATTGGTTGCATTAAGATGTGTGGATCCTGATTATGACAAGAGACCAAAAATGGGCCAAGTTGTTACAATGCTTGAATCTCAAGATCATCATTATAATTCTTCTCGTACACCTTCTACTACTACTACTACTTAA 1413 41.61 MATNNLNKELSKKTNIFGLKVWEVIGIGVGLFIISILCILSLCLTSFNKKSKKSSSSSPNSNTLFPLTQIPSHSKDIKAVHITTTHKKPTTQMGKFETNNNYSSESGSLFHPLSYGYGSQSGDEGSSGTITTTTMYRRSTSPTTTMAPSPLSCMPEMSQLGWGYWFTLRELDLATNLFSEENLIGEGGYGVVFRGKLLNGTPVAVKKILNGQGQAEKEFRAEVEAIGHVRHKNLVRLLGYCIEGTHRMLVYEYINNGSLELWLHEGMGENRYLTWEARMKIMLGTAKGIAYLHEAIEPKVVHRDIKASNILIDENFNAKVSDFGLAKLMDAGKTHVTTRVMGTFGYVAPEYANTGLLNEKSDVYSFGVVLVETITGRDPVDYGRPPKQVNVVDWLKMMIGSRRCEEVVDTKLGVGGRPSTRGLKRVLLVALRCVDPDYDKRPKMGQVVTMLESQDHHYNSSRTPSTTTTT 470
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 31226386 31231263 + CrPI670011_02g017900.1 Cre02g1790 491071
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre02g1790 470 SUPERFAMILY Protein kinase-like (PK-like) 151 456 IPR011009 -
Cre02g1790 470 ProSiteProfiles Protein kinase domain profile. 178 459 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre02g1790 470 Pfam Protein kinase domain 179 387 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre02g1790 470 FunFam Putative receptor-like serine/threonine-protein kinase 254 466 - -
Cre02g1790 470 Gene3D Phosphorylase Kinase; domain 1 154 253 - -
Cre02g1790 470 PANTHER OS01G0323000 PROTEIN 5 462 IPR052232 -
Cre02g1790 470 CDD STKc_IRAK 184 452 - -
Cre02g1790 470 ProSitePatterns Serine/Threonine protein kinases active-site signature. 300 312 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre02g1790 470 ProSitePatterns Protein kinases ATP-binding region signature. 184 207 IPR017441 GO:0005524(InterPro)
Cre02g1790 470 SMART serkin_6 178 451 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre02g1790 470 Gene3D Transferase(Phosphotransferase) domain 1 254 466 - -
Cre02g1790 470 FunFam serine/threonine-protein kinase PBS1-like 152 253 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g1790 Cre-Chr2:31226386 Cre02g2149 Cre-Chr2:35080213 2.60E-141 dispersed
Cre02g1790 Cre-Chr2:31226386 Cre06g1182 Cre-Chr6:5674641 7.60E-141 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63877 PF00069 Pkinase 1.50E-47 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre02g1790 - - - 0.0