Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre02g1796 ATGGAAAAAGGAGATAATATTACAGCATTAATAGGGATGATTGTATTGCAAATATGCTATGCTGGTATAAATATTATCTCAAAGCTTGCCATGCAATCTGGAATGAACCCTCTTGTTCTTCTCACTTATAGACAGATTTTTGGCACTTTGGCCATTGCTCCTTTTGCCTTCTTTACTGAAAGGAAAACAAGGCCAAAGATTACTTTTACAGTTCTGATTCAAATCTTTGCGTGTTCCTTATCAGGAGCAACAGGAAACCAGATATTCTTCTTTGTTGGGTTGAAGTACACAAACCCAACAATTTCGAGTGCTATGGCCAATGTTCTTCCAGCTGCTACTTTTATTCTTGCTGTTCTTTTCAGACAAGAGAGTGTGAGAATCAAGACCAAGTCTGGTTTTGCAAAGGTAATAGGGACAATTGTGTGTGTATGTGGGGCAATGCTGCTGTCTTTCTACCATGGACACACCATTGACTTAGGTGAATCAAAAATTCACTGGCCATATGTTGAGAAAATGATCAAGGAAACAAACCCGGCCAACCATCAAGGAAACCGTGTCCTCGGCTCGATTTTGTTGCTCTTTAGCTCTTTTGCTTGGGCATTATGGTTTGTCATCCAAGCAAGATTGAGTGTGAAGTTCAAAGCTCCCTATACAAGTACTGCATTGTTGTGCTTCATGGCCTTTTTCCAATGTGGACTCATAGCTGTGATTTCAGAGCACAATATTGCTGCTTGGTCTTTGAAAAGTACGATCCGACTCGTTGCAGCTCTTTACGCGGGAGTTGTGTGCTCTGGATTGACATTTAGCATAACTTCATGGATTATACAAAGGAAAGGCCCTCTCTATGTCTCCATTTTCACCCCTTTATTGCTTATCATTGTGGCCATCGTTAGCTGGACTCTCCTCCATGAACAACTCTACGTGGGAACTGTTATTGGGTCTATTTTGATAATCATTGGGCTTTATGCTGTGCTGTGGGGAAAATCCAAAGAGATGAAAGTAGAAGATGATAATGACAACATGGAAAAACCAAGAATAGAGAAGCCAAATGGAAATGGGAGTCATATTATTGAGGAGAAGGATGACATGGAATTGCAAATCACATACATCAAATAA 1116 40.23 MEKGDNITALIGMIVLQICYAGINIISKLAMQSGMNPLVLLTYRQIFGTLAIAPFAFFTERKTRPKITFTVLIQIFACSLSGATGNQIFFFVGLKYTNPTISSAMANVLPAATFILAVLFRQESVRIKTKSGFAKVIGTIVCVCGAMLLSFYHGHTIDLGESKIHWPYVEKMIKETNPANHQGNRVLGSILLLFSSFAWALWFVIQARLSVKFKAPYTSTALLCFMAFFQCGLIAVISEHNIAAWSLKSTIRLVAALYAGVVCSGLTFSITSWIIQRKGPLYVSIFTPLLLIIVAIVSWTLLHEQLYVGTVIGSILIIIGLYAVLWGKSKEMKVEDDNDNMEKPRIEKPNGNGSHIIEEKDDMELQITYIK 371
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 31274294 31277422 + CrPI670011_02g017960.1 Cre02g1796 491077
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre02g1796 371 Pfam EamA-like transporter family 9 150 IPR000620 GO:0016020(InterPro)
Cre02g1796 371 Pfam EamA-like transporter family 187 325 IPR000620 GO:0016020(InterPro)
Cre02g1796 371 SUPERFAMILY Multidrug resistance efflux transporter EmrE 249 330 - -
Cre02g1796 371 PANTHER WAT1-RELATED PROTEIN 12 338 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Cre02g1796 371 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 153 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre01g0985 Cre-Chr1:15579969 Cre02g1796 Cre-Chr2:31274294 1.70E-117 dispersed
Cre02g1796 Cre-Chr2:31274294 Cre04g0633 Cre-Chr4:23822504 5.00E-71 dispersed
Cre02g1796 Cre-Chr2:31274294 Cre11g1981 Cre-Chr11:31568705 1.50E-59 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre02g1796 - - - 0.0