Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre02g1829 ATGATGGGAAGCTTGCCACCACGAGGATTACACCAAAGTCGATGTCATGACGGGTGTCAGGCAACGAATTTTATGAATGCTAAAGGAGAAAATCAGGATCGATCTACTGTCGACGTACTACTGTTATTTGCTGGAGCAAAAGGACACCATAAACCGCCGCCGGCCGGCGACCGGAGATTAGGGGCGTTGCGAGAAACGAACTCACGACCTCTCGCACCCGAAGCGAGAATCATACCACTAGACCAAACGCCCTTTAGGTCAAGGTTTTTTTGGGCAGCGATGGCTCATACCAGCAATACTGCAGCTGGAGTTGATAACACCTTTAGAAGGAAATTTGATCGGGAGGAGTATTTGGAACGAGCTCGTGAGCGTGAAAAACAGGAGGTTGAGAGGGTTAAGTCCAAATTGAAAGGTCCACCAGTGCAAAGAAAACCATTGAAACATAGAGATTACGAGGTAGACCTTGAGTCCCGATTGGGAAAAACCCAGGTTGTCACTCCAGTTGCACCTCTAAGCCAGCAGGCTGGATACTACTGTTCTGTTTGTGAATGTGTAGTCAAGGATTCCGCAAATTACTTGGATCATATCAATGGAAAGAAACATCAGAGAGCCTTGGGTATGTCCATGCGGGTAGAACGGGCATCTCTTGAACAGGTGCAGGAGCGGTTTGAAGTTCTTAAAAAGAGAAAAACGCCAGGAAGCTTCACAGAGCAAGATCTTGAAGAGCGTATACTAAAGCAACAACAAGAAGAAGAACAACGAAAGCGTGAGCGACGGGAAAGGAAGAAAGAAAAGAAGAAAGAGAAGGCTGCAGAAGAGGAACCTGAAGTAGATCCTGATGTTGCAGCAATGATGGGATTTGGAGGCTTCCGTTCATCAAAGAAGTGA 888 46.73 MMGSLPPRGLHQSRCHDGCQATNFMNAKGENQDRSTVDVLLLFAGAKGHHKPPPAGDRRLGALRETNSRPLAPEARIIPLDQTPFRSRFFWAAMAHTSNTAAGVDNTFRRKFDREEYLERAREREKQEVERVKSKLKGPPVQRKPLKHRDYEVDLESRLGKTQVVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQVQERFEVLKKRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAAEEEPEVDPDVAAMMGFGGFRSSKK 295
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 31569191 31575096 - CrPI670011_02g018290.1 Cre02g1829 491110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre02g1829 295 SMART ZnF_U1_5 174 208 IPR003604 GO:0003676(InterPro)|GO:0008270(InterPro)
Cre02g1829 295 Coils Coil 209 229 - -
Cre02g1829 295 PANTHER ZINC FINGER MATRIN-TYPE PROTEIN 2 101 295 IPR040107 GO:0000398(PANTHER)|GO:0000398(InterPro)|GO:0005681(InterPro)|GO:0046540(PANTHER)
Cre02g1829 295 MobiDBLite consensus disorder prediction 230 276 - -
Cre02g1829 295 Coils Coil 115 135 - -
Cre02g1829 295 FunFam zinc finger matrin-type protein 2-like 171 209 - -
Cre02g1829 295 Coils Coil 237 274 - -
Cre02g1829 295 Pfam Zinc-finger of C2H2 type 177 201 IPR013087 -
Cre02g1829 295 Gene3D Classic Zinc Finger 172 209 - -
Cre02g1829 295 SUPERFAMILY beta-beta-alpha zinc fingers 173 218 IPR036236 -
Cre02g1829 295 MobiDBLite consensus disorder prediction 230 295 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre02g1829 K12848 - csv:101206387 326.25