Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre02g1829 | ATGATGGGAAGCTTGCCACCACGAGGATTACACCAAAGTCGATGTCATGACGGGTGTCAGGCAACGAATTTTATGAATGCTAAAGGAGAAAATCAGGATCGATCTACTGTCGACGTACTACTGTTATTTGCTGGAGCAAAAGGACACCATAAACCGCCGCCGGCCGGCGACCGGAGATTAGGGGCGTTGCGAGAAACGAACTCACGACCTCTCGCACCCGAAGCGAGAATCATACCACTAGACCAAACGCCCTTTAGGTCAAGGTTTTTTTGGGCAGCGATGGCTCATACCAGCAATACTGCAGCTGGAGTTGATAACACCTTTAGAAGGAAATTTGATCGGGAGGAGTATTTGGAACGAGCTCGTGAGCGTGAAAAACAGGAGGTTGAGAGGGTTAAGTCCAAATTGAAAGGTCCACCAGTGCAAAGAAAACCATTGAAACATAGAGATTACGAGGTAGACCTTGAGTCCCGATTGGGAAAAACCCAGGTTGTCACTCCAGTTGCACCTCTAAGCCAGCAGGCTGGATACTACTGTTCTGTTTGTGAATGTGTAGTCAAGGATTCCGCAAATTACTTGGATCATATCAATGGAAAGAAACATCAGAGAGCCTTGGGTATGTCCATGCGGGTAGAACGGGCATCTCTTGAACAGGTGCAGGAGCGGTTTGAAGTTCTTAAAAAGAGAAAAACGCCAGGAAGCTTCACAGAGCAAGATCTTGAAGAGCGTATACTAAAGCAACAACAAGAAGAAGAACAACGAAAGCGTGAGCGACGGGAAAGGAAGAAAGAAAAGAAGAAAGAGAAGGCTGCAGAAGAGGAACCTGAAGTAGATCCTGATGTTGCAGCAATGATGGGATTTGGAGGCTTCCGTTCATCAAAGAAGTGA | 888 | 46.73 | MMGSLPPRGLHQSRCHDGCQATNFMNAKGENQDRSTVDVLLLFAGAKGHHKPPPAGDRRLGALRETNSRPLAPEARIIPLDQTPFRSRFFWAAMAHTSNTAAGVDNTFRRKFDREEYLERAREREKQEVERVKSKLKGPPVQRKPLKHRDYEVDLESRLGKTQVVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQVQERFEVLKKRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAAEEEPEVDPDVAAMMGFGGFRSSKK | 295 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 31569191 | 31575096 | - | CrPI670011_02g018290.1 | Cre02g1829 | 491110 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre02g1829 | 295 | SMART | ZnF_U1_5 | 174 | 208 | IPR003604 | GO:0003676(InterPro)|GO:0008270(InterPro) | |
Cre02g1829 | 295 | Coils | Coil | 209 | 229 | - | - | |
Cre02g1829 | 295 | PANTHER | ZINC FINGER MATRIN-TYPE PROTEIN 2 | 101 | 295 | IPR040107 | GO:0000398(PANTHER)|GO:0000398(InterPro)|GO:0005681(InterPro)|GO:0046540(PANTHER) | |
Cre02g1829 | 295 | MobiDBLite | consensus disorder prediction | 230 | 276 | - | - | |
Cre02g1829 | 295 | Coils | Coil | 115 | 135 | - | - | |
Cre02g1829 | 295 | FunFam | zinc finger matrin-type protein 2-like | 171 | 209 | - | - | |
Cre02g1829 | 295 | Coils | Coil | 237 | 274 | - | - | |
Cre02g1829 | 295 | Pfam | Zinc-finger of C2H2 type | 177 | 201 | IPR013087 | - | |
Cre02g1829 | 295 | Gene3D | Classic Zinc Finger | 172 | 209 | - | - | |
Cre02g1829 | 295 | SUPERFAMILY | beta-beta-alpha zinc fingers | 173 | 218 | IPR036236 | - | |
Cre02g1829 | 295 | MobiDBLite | consensus disorder prediction | 230 | 295 | - | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre02g1829 | K12848 | - | csv:101206387 | 326.25 |