Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre02g1841 ATGGGGCATTTCTCCACCATGTTTAATGGGCTGGCAAGGTCATTTTCCTTCAAGAAAGGTAGAAATTCTGGGAGTCTAGGCAACGAGGGAGGGCGAGAAGCTGCAAAAGCCATGATAAAGGATGCAAAAAGGAAAGACTCGATATTATGCACCTCCGGTGTACTCAATGCAGAAGGTTCGGATACTTTTGCTTCAGTGTTCTCGAAGAAAGGCGAAAAAGGAGTAAACCAAGATTGCTGCATTGTATGGGAGGAATTTGGATGCCAAGAAGACATGATATTTTGTGGGATTTTCGATGGGCACGGACCATGGGGTCACTTTGTTGCAAAGACGGTAAGAGAATCATTGCCGCCTTCTTTGCTGTGCCATTGGCAGCAAGGACTTGCTCAAGCTTTTCTTGACCCAGAATTGGATTCAGAAAAGAAGCATCAGCGATTTGATATATGGAAGCATTCTTATTTAAGAACTTGTGCTGCCATTGATCACGAACTCGAGCGGCACCGTAAAATCGATACATTTTACAGTGGAACAACTGCCCTGTCCATTGTTAAACAGGGCGAAGTGGTCGTTTTGGCCAACGTAGGTGACTCCCGAGCGGTTTTAGCTACTACTTCAGATGATGGAAGTATAGTACCGGTTCAGCTCACCGTTGATTTCAAACCAAACCTACCTCAGGAGGCTGAGCGGATAATTCAATGCAATGGGAGGGTATTTTGTTTAAGTGACGAGCCGGGAGTTCATAGGGTCTGGCTTCCCAACGAGGAAACCCCGGGATTGGCGATGTCGAGAGCCTTCGGTGATTATTGTATTAAAGAATTCGGACTCATTTCTGTGCCAGAAGTAACACATAGAAGTATAACCAGCAGAGACCAATTCATTATATTGGCCACTGATGGGGTATGGGATGTTGTCACCAACCAAGAAGCAGTGGAGATTGTATCGTCAACACCGAATCGCGCGAAATCGTCGAAACGTCTGGTCGAGTGTGCTGTTCGGGCATGGAAACGGAAGAGACGAGGCATTGCAATGGATGATATATCAGCTATCTGTCTCTTCTTCCACTCCTCATCAGAGCAAGATGATCACCTTGTATCCACACTATAG 1104 45.92 MGHFSTMFNGLARSFSFKKGRNSGSLGNEGGREAAKAMIKDAKRKDSILCTSGVLNAEGSDTFASVFSKKGEKGVNQDCCIVWEEFGCQEDMIFCGIFDGHGPWGHFVAKTVRESLPPSLLCHWQQGLAQAFLDPELDSEKKHQRFDIWKHSYLRTCAAIDHELERHRKIDTFYSGTTALSIVKQGEVVVLANVGDSRAVLATTSDDGSIVPVQLTVDFKPNLPQEAERIIQCNGRVFCLSDEPGVHRVWLPNEETPGLAMSRAFGDYCIKEFGLISVPEVTHRSITSRDQFIILATDGVWDVVTNQEAVEIVSSTPNRAKSSKRLVECAVRAWKRKRRGIAMDDISAICLFFHSSSEQDDHLVSTL 367
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 31693041 31694843 - CrPI670011_02g018410.1 Cre02g1841 491122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre02g1841 367 PANTHER PROTEIN PHOSPHATASE 46 352 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cre02g1841 367 FunFam Probable protein phosphatase 2C 34 54 355 - -
Cre02g1841 367 ProSiteProfiles PPM-type phosphatase domain profile. 63 353 IPR001932 -
Cre02g1841 367 Gene3D - 50 356 IPR036457 -
Cre02g1841 367 SUPERFAMILY PP2C-like 59 354 IPR036457 -
Cre02g1841 367 CDD PP2Cc 63 353 IPR001932 -
Cre02g1841 367 Pfam Protein phosphatase 2C 87 328 IPR001932 -
Cre02g1841 367 SMART PP2C_4 52 351 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g0457 Cre-Chr2:1823589 Cre02g1841 Cre-Chr2:31693041 8.30E-85 dispersed
Cre02g1841 Cre-Chr2:31693041 Cre11g1393 Cre-Chr11:17786343 8.40E-95 dispersed
Cre03g2022 Cre-Chr3:37204586 Cre02g1841 Cre-Chr2:31693041 2.00E-141 transposed
Cre02g1841 Cre-Chr2:31693041 Cre06g1248 Cre-Chr6:6383007 6.80E-113 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre02g1841 - - - 0.0