Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre02g1935 ATGTTGAGATTCCATGTGGGCGGGAAGGTGGTCGAGAGAGTTGACTTGTTGAGGAAGAAGCACTGGGCATGGCGGTTCGATCTGTGGCCATTTGCCATTCTTTATGCGGCCTGGCTTGCCGTTGTTGTTCCTAGTATAGACTTTGGGGATGCTTTCATTGTTTTAGGTGGACTTGCGGCTCTTCATGTTCTGGTCTTGCTTTTCACTTCTTGGTCGGTTGATTTCAAATGTTTTGTCCAGTACAGTCAGGTTAATGATATTTACCGTGCTGATACATGCAAGATAGTTCCAGCAAAATTTTCGGGCTCAAAAGAAATTGTTTCACTTCATTTTCGTAAGCTTCTGGCAGGTTCTGCATCTGCAGTTGACCTTGAGGAGATCTACTTTGATTTCAGAAAACAACGATTTATTTATTCAAAGGAGAAGGAGACATTCTGCAAGCTTCCTTACCCAACAAAAGAAACTTTTGGTTATTATCTAAAGAATACTGGCTATGGGTCCGAGCCTAAAGTTGTAGCTGCTGTTGAAAAATGGGGGCGCAATATATTCGAGTATCCACAACCTACGTTTCAGAAATTAATGAAGGAGCAGTGTATGGAACCATTTTTTGTGTTTCAGGTTTTTTGTGTGGGACTATGGTGTTTGGATGAGTATTGGTATTACAGCCTGTTTACTCTGTTTATGCTGTTCATGTTTGAGTCAACAATGGCAAAAAGTCGGTTAAAGACCTTAAGTGAGTTAAGACGTGTCAGAGTGGATACTCAGACCTTAATGGTGCACCGTTGTGGAAAGTGGGTGAAGCTACCTGGAACTGAGCTTTTGCCAGGAGATGTTGTCTCCATAGGGCGTGATTCTGGTCAGAGTGGTGAAGATAAATCCGTACCTGCTGATATGCTTATTTTGGCTGGAAGTACTATTGTTAATGAAGCCATTCTTACTGGGGAGTCTACACCACAATGGAAGGTTTCAATAACCGGGAGAGGAATTGAGGAGAAGTTATCAGCTAAGAGAGACAAAAGTCATGTGTTATTTGGTGGGACCAAAATACTCCAGCATACTCCGGATAAGACCTTTCCTCTTAGAACCCCTGATGGTGGCTGCCTAGCAGTTGTTTTGCGAACTGGATTTGAAACAAGTCAAGGGAAACTAATGCGCACAATTTTGTTTTCTACAGAGAGGGTTACAGCTAACAGTTGGGAAAGTGGCCTATTTATTTTGTTCTTAGTTGTATTTGCAGTTATAGCTGCTGGTTACGTACTTGTAAAGGGGTTGGAAGATCCCACGAGAAGCAAGTACAAGCTTTTCCTTAGTTGCTCACTTATAATCACCTCTGTTATTCCTCCTGAACTACCAATGGAACTGTCAATAGCAGTTAATACATCATTAATTGCTCTAGCACGCCGTGGAATATTTTGTACAGAGCCTTTCCGGATACCATTTGCTGGAAAGGTTGATATTTGTTGTTTCGATAAAACTGGAACATTGACATCAGATGACATGGAGTTTCGAGGAGTAGTTGGGTTGAGTGATAAGGAGGATTTGGAAACTGACATGACTAGTGTGTCTTTGCGTACAGTCGAAATTCTGGCTTCTTGTCATGCATTGGTGTTTGTGGACAACAAGTTGGTGGGGGATCCTCTTGAAAAGGCTGCTCTCAAGGGAGTTGATTGGATTTACAAATCTGATGAGAAAGCGATTCCCAGAAAGGGAAGTGGCCACGCTGTCCAGATTGTTCAGCGGCATCACTTTGCTTCACATTTGAAGAGAATGGCAGTTGTTGTGCGCCTTCAAGAGGAATTTTTTGCATTTGTGAAGGGCGCCCCCGAAACCATCCAGGAGAGGCTCACTGATATACCTTCATTTTATGTTGAGACATATAAGAAATATACACGACAAGGTTCCCGAGTCCTTGCTCTTGCTTATAAATCACTTCCAGACATGACAGTTAGTGAAGCTAGAGGCCTGGATAGGGACACGGTAGAGAGTGACCTGACATTTGCTGGTTTTGCGGTGTTCAATTGTCCAATTAGAGCAGATTCGGCTACAGTATTATCTGAGCTTAAAGGGTCATCCCATGACTTGGTAATGATTACTGGTGACCAAGCTTTAACAGCGTGCCATGTTGCTAGCCAAGTTCATATTACATCAAAGCAGATTTTAATTCTCAATTCAATGAAGGGAACTGAGGAATATGAATGGCTTTCCCCAGATGAGTCACAGAAAGTTCCCTACAGAGAGAAAGAGGTGGGAACTTTATCGGAGACATATGATCTTTGTATTGGAGGTGACTGCATCGCAATGCTACAACGCACCTCTACTGTGCTGGATGTTATTCCATACGTTAAGGTTTTTGCAAGAGTTGCTCCTGAGCAGAAAGAACTCATTTTGACAACTTTCAAAACAGTTGGAAGAATGACGTTAATGTGTGGGGATGGAACGAATGATGTTGGAGCTTTGAAGCAGGCCCATGTAGGAATTGCTCTCCTAAACGCAGTCCCTCCTCCTCAAAGTGGCAACTCTTCTTCAGAAGCATCAAAAGATGAGGCTGTACGGTCTGCAAAGTCAAAGAAATCTAAGCCTTCATCCGAATCATCAGGAAAAGCACTTGTAAGTGGAGAAGGTTCTTCAAAAAGCAAAGGTGGTGCAAAACTGGATTCTGCTGCTGAGCAATCAAGTAACCGTCCACGGACACCTGCAGAGATGCAAAGACAGAAGCTAAAGAAACTTATGGATGAGTTAAATGAAGAGGGCGATGGGCGCTCTGCCCCTATTGTCAAGCTTGGAGATGCATCCATGGCATCACCATTCACCGCAAAGCATGCCTCTGTTGCTCCTACTACTGACATTATTCGCCAAGGCCGAAGTACTCTAGTGACAACTCTACAGATGTTCAAAATACTCGGTCTCAACTGCCTCGCTACTGCCTACGTACTGAGTGTTATGTATTTGGATGGTGTAAAGCTTGGCGATATTCAAGCCACTATCAGTGGAGTATTCACAGCAGCCTTTTTTCTCTTCATCTCACATGCGCGGCCCCTTCCAACACTCTCAGCTGAACGCCCCCATCCACACATCTTTTGCTCTTACGTGCTCCTTTCTCTGTTGGGCCAATTTGCAATCCACTTATGTTTCTTGATTTCTTCGGTTAAAGAAGCTGAAAAGCACATGCCTGATGAATGTATAGAGCCAGACTCAGATTTTCATCCCAACTTGGTTAACACGGTTTCATACATGGTAAGCATGATGCTTCAGGTGTCAACCTTTGCTGTAAACTACATGGGTCATCCCTTCAACCAGAGTGTATCCGAAAACAAGCCATTCTTATACGCCCTCTTGGCTGCAGTCGGTTTTTTCACCGTTATTACCTCTGATTTGTTTAGAGATCTCAATGACTGGCTGAAACTTGTTCCATTGCCTGTGGGAATGAGGGATAAGCTTCTGGCTTGGGCACTTCTTATGTTCTTGTGCTGTTACTCTTGGGAAAGACTGTTGAGATTTATGTTCCCAGGTAAAATCCCAGCATGGCGGAAGCGACAACGACTGGTGGCTGCTAATCTGGAGAAGAAGAAACAGTGGAAGGAACGCGAAAGCCCTACCTTTTCTAGATTGTTCATCGTTTCCATATTATCGGTTCTCTTCTCAGATCGCTCTCTAGTTTCGTCGGCTTCCCAGATCATGAAACAAGATTCAAATATGGAAGCAAATTCTGCTTTGCTTGAATGTGAGAAGGAAGTAGGTATATCTAATGTACAGGAAGCTGGGGGGAATGTAGAAGAGTTCTCAACTGAACACGAAGGTAAGAGGAAAGAAGCAGGGTCTTCGGCAGTTCAAGAAGATAGCATAATGAAAGAAGACTTTCCCGCAGAACAAGCAGATGACATGAAAGAAGCCGTAGCTGAAGTTAGGAACACTGTTGAAGTTGGGAAGTCGGATGAAAAGTGCATTGAAGAAGGGTTGCGTAAAAAGAAAATTGTAAAAGTTTTGAAGGTCAAAAAGAAAATTATAAAGAAATCCCCAGCTAGCGGTGTGTTGAAGAGAAAAAAGGCACAAGTTGAACAGGAAGATGACAAAAAGGAAAAAGTGGTTCGTGTAGCTCAAGGGGAAGAGACACAGGTTGAACAGGAAGTTGACAAAAAGGAAAAAGAGGTTCCTGTAGCTGAAGAAGTGGAAGAAACACTTGAACCCCAGAATCCCACCGAAAATTCCAAACCAGAGTCAAAGGTTTCTATAGATCAAGAAGTGGAAGAAATAGCTCAACCTCAGAATCCCATTGAAAATTCCAAACCAGAGTCAAAGGCGAAGAAGAATAACAATGTTTTGAAGGTCAAAAGGAAAATTGTAAAGAAATCTCCGGCCAACAGTCAAAAGAAGACTAATAATCTTCAAAGTAGTCCTAAGGTGCAAGTTAGAAAGAAAGTGGAGAATAGTAAGAGTTCGTTGCAGGAAAATGGGGAAGGTAGTGAAAAGAAGGTAGAGGATACGGAGAAGCCTAACCGAAAGGAAAATGTTAAAAAAAGTATCTCAAAAGAGGAGCATATCGGAAAGGGAGAAGAGACTTCTAATAGTCATAAACACAAGTTTGAGTCTAAAAATAGCATAAAAGAAGGGAAAGTCATGGAGAAGGTCGGTTCTTCAGATAAGAGCACAAAGAATCAGAATAAGAAAGAAGAGGATAGAGAGAAAAAGAGTCAAAGAGAAGATAAACATAAAGAAAATCTTGGAGGACTGATTTTCATGTGCAGTGCAAAAACGAAGCCGGATTGTTTTAACTACAATGTAATGGGTGTTTCTGCCGGCAAAAAGGATGTTGTCTTGGCAATTAAACCTGGGTTGAAGCTCTTTCTCTACGATTTTGATCTCAGGCTTCTGTATGGGATTTATAAAGCATCCTCTTCCGGTGGCATGAAACTTGAGCCAAAGGCTTTTAATGGGGCTTTCCCTGCTCAGGTGCGGTTTAATATTTACAAGGATTGTTTTCCACTACCTGAAAGTATTTTCAAGAAGGCTATCCAAGAGAACTATTATGAGAAGCACAAGTTCAAAGCTGAACTCACGGTTAAACAGGTTAGGAAGCTCTCAGATCTTTTCCGACCAATTGGACTCCACTCGAGTTCTACTCTTGTTCGGTCCCATGCGGAGGTACCAATTAGGGATAGAAATGTTCATGGGGAAGCTAAAGACATTCGGGTTAGGAACTCTAAGTCCAAGGGTGATGCCAGGAAATACCATTTGTCATCTTATGGAAGGGGTCGACATCGAGAAGAGGCACCTAGACATAGAGAGGAAGTTCCTCGTGATTTATACCTAAGCGAAAAGGACTATCGAACATATGGTCTCCGATCAGAGAGGAGAAATTTAGATCCTGTGTCTCGACCTTCTTTAGAAACATACAACAGAGATCATGATAGGGACTATCAACTGAGACATCTAGAGCCCAGATATAGTGACGATGTCTCTACACACGCACAGAGAGAAATAGTTCGCGCGGATCATGTATACTTTAATGGGAAAGATTATCCGGTTTACGGTATTGATTCTAGACATCAAATATCACCTCCTAGAGCAATATCTGCTAGTGGGTTGGAACGCAATACTTATGATTCGATTTACACTCGTCAATATGGCCTTCCTTCAATTGATCCATATCTCCTTCCTTCAAGGAGGGAGGAAGCAGCCCCTCCAACTTATTCAAGAAGTTATCTTGCTGATACTGAACCCATGAGACATGCTGCTGGAGCTCTATCGCATTACACTCAAGCGCATCACAAAGAAGTGGAAAATGATACAATGCCGGTTTCATCGCGCACAGGAGCTTTCATGTATGAAACTATTGAGTCTCAGATTCATTGTGCTGTTGGAGTTCATCTTACCTTTTTAGTGGTGATGGGAAATTTTGCTCCTGGGTTCTATGTCGGTGTTGATGACAATGCACTCGCCCTTGAATCACTCACATTTTCAGATAAGAGTGTTTTGGACGAAGAACAGACATTTTCTGGTCAATGA 6003 42.55 MLRFHVGGKVVERVDLLRKKHWAWRFDLWPFAILYAAWLAVVVPSIDFGDAFIVLGGLAALHVLVLLFTSWSVDFKCFVQYSQVNDIYRADTCKIVPAKFSGSKEIVSLHFRKLLAGSASAVDLEEIYFDFRKQRFIYSKEKETFCKLPYPTKETFGYYLKNTGYGSEPKVVAAVEKWGRNIFEYPQPTFQKLMKEQCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSRLKTLSELRRVRVDTQTLMVHRCGKWVKLPGTELLPGDVVSIGRDSGQSGEDKSVPADMLILAGSTIVNEAILTGESTPQWKVSITGRGIEEKLSAKRDKSHVLFGGTKILQHTPDKTFPLRTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYVLVKGLEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDICCFDKTGTLTSDDMEFRGVVGLSDKEDLETDMTSVSLRTVEILASCHALVFVDNKLVGDPLEKAALKGVDWIYKSDEKAIPRKGSGHAVQIVQRHHFASHLKRMAVVVRLQEEFFAFVKGAPETIQERLTDIPSFYVETYKKYTRQGSRVLALAYKSLPDMTVSEARGLDRDTVESDLTFAGFAVFNCPIRADSATVLSELKGSSHDLVMITGDQALTACHVASQVHITSKQILILNSMKGTEEYEWLSPDESQKVPYREKEVGTLSETYDLCIGGDCIAMLQRTSTVLDVIPYVKVFARVAPEQKELILTTFKTVGRMTLMCGDGTNDVGALKQAHVGIALLNAVPPPQSGNSSSEASKDEAVRSAKSKKSKPSSESSGKALVSGEGSSKSKGGAKLDSAAEQSSNRPRTPAEMQRQKLKKLMDELNEEGDGRSAPIVKLGDASMASPFTAKHASVAPTTDIIRQGRSTLVTTLQMFKILGLNCLATAYVLSVMYLDGVKLGDIQATISGVFTAAFFLFISHARPLPTLSAERPHPHIFCSYVLLSLLGQFAIHLCFLISSVKEAEKHMPDECIEPDSDFHPNLVNTVSYMVSMMLQVSTFAVNYMGHPFNQSVSENKPFLYALLAAVGFFTVITSDLFRDLNDWLKLVPLPVGMRDKLLAWALLMFLCCYSWERLLRFMFPGKIPAWRKRQRLVAANLEKKKQWKERESPTFSRLFIVSILSVLFSDRSLVSSASQIMKQDSNMEANSALLECEKEVGISNVQEAGGNVEEFSTEHEGKRKEAGSSAVQEDSIMKEDFPAEQADDMKEAVAEVRNTVEVGKSDEKCIEEGLRKKKIVKVLKVKKKIIKKSPASGVLKRKKAQVEQEDDKKEKVVRVAQGEETQVEQEVDKKEKEVPVAEEVEETLEPQNPTENSKPESKVSIDQEVEEIAQPQNPIENSKPESKAKKNNNVLKVKRKIVKKSPANSQKKTNNLQSSPKVQVRKKVENSKSSLQENGEGSEKKVEDTEKPNRKENVKKSISKEEHIGKGEETSNSHKHKFESKNSIKEGKVMEKVGSSDKSTKNQNKKEEDREKKSQREDKHKENLGGLIFMCSAKTKPDCFNYNVMGVSAGKKDVVLAIKPGLKLFLYDFDLRLLYGIYKASSSGGMKLEPKAFNGAFPAQVRFNIYKDCFPLPESIFKKAIQENYYEKHKFKAELTVKQVRKLSDLFRPIGLHSSSTLVRSHAEVPIRDRNVHGEAKDIRVRNSKSKGDARKYHLSSYGRGRHREEAPRHREEVPRDLYLSEKDYRTYGLRSERRNLDPVSRPSLETYNRDHDRDYQLRHLEPRYSDDVSTHAQREIVRADHVYFNGKDYPVYGIDSRHQISPPRAISASGLERNTYDSIYTRQYGLPSIDPYLLPSRREEAAPPTYSRSYLADTEPMRHAAGALSHYTQAHHKEVENDTMPVSSRTGAFMYETIESQIHCAVGVHLTFLVVMGNFAPGFYVGVDDNALALESLTFSDKSVLDEEQTFSGQ 2000
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 32703652 32731968 - CrPI670011_02g019350.1 Cre02g1935 491216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre02g1935 2000 MobiDBLite consensus disorder prediction 1452 1469 - -
Cre02g1935 2000 SFLD p-type atpase 469 955 IPR044492 -
Cre02g1935 2000 SUPERFAMILY Calcium ATPase, transmembrane domain M 167 1169 IPR023298 -
Cre02g1935 2000 SMART dcd 1571 1698 IPR013989 -
Cre02g1935 2000 FunFam Cation-transporting ATPase 484 668 - -
Cre02g1935 2000 Pfam Cation transport ATPase (P-type) 540 618 - -
Cre02g1935 2000 SFLD C1.7: P-type atpase like 469 955 - -
Cre02g1935 2000 PRINTS P-type cation-transporting ATPase superfamily signature 308 322 - -
Cre02g1935 2000 PRINTS P-type cation-transporting ATPase superfamily signature 690 700 - -
Cre02g1935 2000 PRINTS P-type cation-transporting ATPase superfamily signature 488 502 - -
Cre02g1935 2000 PRINTS P-type cation-transporting ATPase superfamily signature 809 828 - -
Cre02g1935 2000 ProSitePatterns E1-E2 ATPases phosphorylation site. 490 496 IPR018303 -
Cre02g1935 2000 ProSiteProfiles DCD domain profile. 1571 1698 IPR013989 -
Cre02g1935 2000 MobiDBLite consensus disorder prediction 1470 1568 - -
Cre02g1935 2000 Gene3D - 224 388 - -
Cre02g1935 2000 SUPERFAMILY HAD-like 483 834 IPR036412 -
Cre02g1935 2000 ProSitePatterns Hypothetical cof family signature 2. 809 831 - -
Cre02g1935 2000 MobiDBLite consensus disorder prediction 1259 1279 - -
Cre02g1935 2000 PANTHER CATION-TRANSPORTING ATPASE-RELATED 9 1185 IPR006544 GO:0006874(PANTHER)|GO:0015662(PANTHER)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0019829(PANTHER)|GO:0030176(PANTHER)|GO:0055085(PANTHER)|GO:0140358(InterPro)
Cre02g1935 2000 MobiDBLite consensus disorder prediction 1342 1568 - -
Cre02g1935 2000 Coils Coil 896 916 - -
Cre02g1935 2000 Gene3D - 483 668 IPR023299 GO:0000166(InterPro)
Cre02g1935 2000 FunFam Cation-transporting ATPase 226 388 - -
Cre02g1935 2000 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 494 678 IPR023299 GO:0000166(InterPro)
Cre02g1935 2000 MobiDBLite consensus disorder prediction 1259 1274 - -
Cre02g1935 2000 Pfam Development and cell death domain 1574 1696 IPR013989 -
Cre02g1935 2000 Gene3D - 669 846 IPR023214 -
Cre02g1935 2000 MobiDBLite consensus disorder prediction 885 899 - -
Cre02g1935 2000 MobiDBLite consensus disorder prediction 1347 1388 - -
Cre02g1935 2000 MobiDBLite consensus disorder prediction 830 903 - -
Cre02g1935 2000 CDD P-type_ATPase_cation 170 1107 IPR047820 -
Cre02g1935 2000 NCBIfam ATP13A2 family polyamine export P-type ATPase 42 1149 IPR006544 GO:0016020(InterPro)|GO:0140358(InterPro)
Cre02g1935 2000 NCBIfam HAD-IC family P-type ATPase 774 828 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cre02g1935 2000 NCBIfam HAD-IC family P-type ATPase 403 517 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cre02g1935 2000 Coils Coil 1362 1382 - -
Cre02g1935 2000 FunFam Cation-transporting ATPase 669 844 - -
Cre02g1935 2000 Pfam E1-E2 ATPase 257 468 - -
Cre02g1935 2000 MobiDBLite consensus disorder prediction 847 861 - -
Cre02g1935 2000 SUPERFAMILY Calcium ATPase, transduction domain A 256 387 IPR008250 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g1935 Cre-Chr2:32703652 Cre09g0789 Cre-Chr9:7842482 1.80E-183 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre02g1935 K14950 - csv:101215828 2290.38