Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre02g1980 | ATGGCGGCTAGGAGGATATCCTCTCTCTTATCTCGTTCCCTTCCTTCTTCGCTGCCTCTCCTTTCCAAAGGTAGTAGGCGTTTCAGTGGCAGAACAACTGCCAAATATAGCACTGCAGCTGCTGTTGAAGATCCTATTACTCCATCTGTGAAAGTGAATTACACCCAGTTGTTAATCAATGGACAGTTTGTGGATTCAGTCTCAGGAAAAACTTTTCCTACTTTGGATCCAAGGACTGGGGGAGTCATTGCAAATGTTGCTGAAGGTGATGCTAAAGATGTTGATCTTGCAGTTTCTGCTGCACGCAAGGCGTTTGATGAAGGTCCTTGGCCTAGAATGACTGCTTATGAAAGATCGAAGATAATTTTGCGGTTTGCTGATTTGGTTGAAAAGCATGCCGATGAAGTTGCAGCACTCGAAACATGGGACAATGGTAAAACATATGAACAATCAGCAAAAATTGAAGTCCCGATGTTCGTACGCCTCTTTCGATACTATGGCGGATGGGCGGATAAGATCCATGGACTCACAGTTCCTGCTGATGGCTCGTATCATGTGCAGACATTGCACGAACCGATTGGCGTGGCGGGTCAGATCATTCCATGGAACTTCCCTCTGCTTATGTTTGCTTGGAAGGTTGGTCCAGCGTTAGCATGTGGGAATACTATTGTGCTGAAGACAGCTGAGCAGACACCTTTGTCTGCTCTCTTTGTGGCTAAGCTATTGCATGAGGCTGGACTTCCTGAGGGCGTTCTGAATATTGTTTCGGGTTATGGACCCACTGTTGGTGCTGCTATTGCCAGTCATATGGAAGTTGACAAGCTTGCTTTTACCGGATCAACTGAAACAGGGAAGATTGTACTTGAATTAGCTGCAAAAAGCAATTTGAAGCCAGTAACATTGGAGCTTGGTGGAAAATCCCCTTTCATTGTATGTGAGGATGCTGATGTAGACAAGGCTGTGGAGATGGCACACTTTGCTCTCTTCTTCAACCAGGGACAATGTTGCTGTGCTGGTTCTCGTACTTTCGTTCATGAAAAAGTATTCGACGAGTTCCTAGAAAAAGCAAGAAAACGAGCTGCGAACCGCGTTGTTGGTGATCCTTTCCTAGGTGGAATTGAGCAAGGTCCTCAGGTCGATGAAGAACAATTCAAAAAGATATTGAAATATATAAAACTTGGGATTGAAGGAGGAGCCACTCTTGAAGCAGGAGGAGAAAGGTTTGGTTCCAAGGGTTACTATGTCCAACCAACAGTTTTCTCAAATGTCAAGGATGACATGAAAATTGCACAGGAGGAGATTTTTGGTCCTGTACAAACAATCTTGAAATACAAAGAGATTGATGAGGTGATAAGGAGGGCAAATGCTAGTCCTTATGGGCTGGCTGCTGGAGTGTTTACTCAAAATATCGACACAGCTAACCGGTTGACACGTGCGTTGAGAGTCGGGTCAGTATGGATCAATTGCTTTGATATATTTGATGCTGCAGTTCCTTTTGGAGGGTACAAGATGAGTGGACATGGGAGAGAAAAGGGAATTTACAGCCTTAGCAATTACCTGCAAGTGAAGGCTGTTGTGACTCCTTTGGAAAAGCCTGCTTGGCTTTAG | 1608 | 44.78 | MAARRISSLLSRSLPSSLPLLSKGSRRFSGRTTAKYSTAAAVEDPITPSVKVNYTQLLINGQFVDSVSGKTFPTLDPRTGGVIANVAEGDAKDVDLAVSAARKAFDEGPWPRMTAYERSKIILRFADLVEKHADEVAALETWDNGKTYEQSAKIEVPMFVRLFRYYGGWADKIHGLTVPADGSYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALFVAKLLHEAGLPEGVLNIVSGYGPTVGAAIASHMEVDKLAFTGSTETGKIVLELAAKSNLKPVTLELGGKSPFIVCEDADVDKAVEMAHFALFFNQGQCCCAGSRTFVHEKVFDEFLEKARKRAANRVVGDPFLGGIEQGPQVDEEQFKKILKYIKLGIEGGATLEAGGERFGSKGYYVQPTVFSNVKDDMKIAQEEIFGPVQTILKYKEIDEVIRRANASPYGLAAGVFTQNIDTANRLTRALRVGSVWINCFDIFDAAVPFGGYKMSGHGREKGIYSLSNYLQVKAVVTPLEKPAWL | 535 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 33269943 | 33273366 | + | CrPI670011_02g019800.1 | Cre02g1980 | 491261 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre02g1980 | 535 | FunFam | Aldehyde dehydrogenase, putative | 497 | 523 | - | - | |
Cre02g1980 | 535 | PANTHER | ALDEHYDE DEHYDROGENASE-RELATED | 50 | 527 | - | GO:0004029(PANTHER) | |
Cre02g1980 | 535 | CDD | ALDH_F2BC | 52 | 527 | - | - | |
Cre02g1980 | 535 | ProSitePatterns | Aldehyde dehydrogenases glutamic acid active site. | 301 | 308 | IPR029510 | GO:0016491(InterPro) | |
Cre02g1980 | 535 | ProSitePatterns | Aldehyde dehydrogenases cysteine active site. | 329 | 340 | IPR016160 | GO:0016491(InterPro) | |
Cre02g1980 | 535 | Pfam | Aldehyde dehydrogenase family | 63 | 525 | IPR015590 | GO:0016491(InterPro) | |
Cre02g1980 | 535 | FunFam | ALD5p Mitochondrial aldehyde dehydrogenase | 59 | 330 | - | - | |
Cre02g1980 | 535 | Gene3D | Aldehyde Dehydrogenase; Chain A, domain 2 | 305 | 494 | IPR016163 | GO:0016620(InterPro) | |
Cre02g1980 | 535 | FunFam | Mitochondrial aldehyde dehydrogenase 2 | 307 | 496 | - | - | |
Cre02g1980 | 535 | SUPERFAMILY | ALDH-like | 51 | 528 | IPR016161 | GO:0016491(InterPro) | |
Cre02g1980 | 535 | Gene3D | Aldehyde Dehydrogenase; Chain A, domain 1 | 59 | 523 | IPR016162 | GO:0016491(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre02g1980 | Cre-Chr2:33269943 | Cre06g2558 | Cre-Chr6:33193422 | 1.30E-245 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre02g1980 | K00128 | - | csv:101202756 | 976.081 |