Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre02g1980 ATGGCGGCTAGGAGGATATCCTCTCTCTTATCTCGTTCCCTTCCTTCTTCGCTGCCTCTCCTTTCCAAAGGTAGTAGGCGTTTCAGTGGCAGAACAACTGCCAAATATAGCACTGCAGCTGCTGTTGAAGATCCTATTACTCCATCTGTGAAAGTGAATTACACCCAGTTGTTAATCAATGGACAGTTTGTGGATTCAGTCTCAGGAAAAACTTTTCCTACTTTGGATCCAAGGACTGGGGGAGTCATTGCAAATGTTGCTGAAGGTGATGCTAAAGATGTTGATCTTGCAGTTTCTGCTGCACGCAAGGCGTTTGATGAAGGTCCTTGGCCTAGAATGACTGCTTATGAAAGATCGAAGATAATTTTGCGGTTTGCTGATTTGGTTGAAAAGCATGCCGATGAAGTTGCAGCACTCGAAACATGGGACAATGGTAAAACATATGAACAATCAGCAAAAATTGAAGTCCCGATGTTCGTACGCCTCTTTCGATACTATGGCGGATGGGCGGATAAGATCCATGGACTCACAGTTCCTGCTGATGGCTCGTATCATGTGCAGACATTGCACGAACCGATTGGCGTGGCGGGTCAGATCATTCCATGGAACTTCCCTCTGCTTATGTTTGCTTGGAAGGTTGGTCCAGCGTTAGCATGTGGGAATACTATTGTGCTGAAGACAGCTGAGCAGACACCTTTGTCTGCTCTCTTTGTGGCTAAGCTATTGCATGAGGCTGGACTTCCTGAGGGCGTTCTGAATATTGTTTCGGGTTATGGACCCACTGTTGGTGCTGCTATTGCCAGTCATATGGAAGTTGACAAGCTTGCTTTTACCGGATCAACTGAAACAGGGAAGATTGTACTTGAATTAGCTGCAAAAAGCAATTTGAAGCCAGTAACATTGGAGCTTGGTGGAAAATCCCCTTTCATTGTATGTGAGGATGCTGATGTAGACAAGGCTGTGGAGATGGCACACTTTGCTCTCTTCTTCAACCAGGGACAATGTTGCTGTGCTGGTTCTCGTACTTTCGTTCATGAAAAAGTATTCGACGAGTTCCTAGAAAAAGCAAGAAAACGAGCTGCGAACCGCGTTGTTGGTGATCCTTTCCTAGGTGGAATTGAGCAAGGTCCTCAGGTCGATGAAGAACAATTCAAAAAGATATTGAAATATATAAAACTTGGGATTGAAGGAGGAGCCACTCTTGAAGCAGGAGGAGAAAGGTTTGGTTCCAAGGGTTACTATGTCCAACCAACAGTTTTCTCAAATGTCAAGGATGACATGAAAATTGCACAGGAGGAGATTTTTGGTCCTGTACAAACAATCTTGAAATACAAAGAGATTGATGAGGTGATAAGGAGGGCAAATGCTAGTCCTTATGGGCTGGCTGCTGGAGTGTTTACTCAAAATATCGACACAGCTAACCGGTTGACACGTGCGTTGAGAGTCGGGTCAGTATGGATCAATTGCTTTGATATATTTGATGCTGCAGTTCCTTTTGGAGGGTACAAGATGAGTGGACATGGGAGAGAAAAGGGAATTTACAGCCTTAGCAATTACCTGCAAGTGAAGGCTGTTGTGACTCCTTTGGAAAAGCCTGCTTGGCTTTAG 1608 44.78 MAARRISSLLSRSLPSSLPLLSKGSRRFSGRTTAKYSTAAAVEDPITPSVKVNYTQLLINGQFVDSVSGKTFPTLDPRTGGVIANVAEGDAKDVDLAVSAARKAFDEGPWPRMTAYERSKIILRFADLVEKHADEVAALETWDNGKTYEQSAKIEVPMFVRLFRYYGGWADKIHGLTVPADGSYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALFVAKLLHEAGLPEGVLNIVSGYGPTVGAAIASHMEVDKLAFTGSTETGKIVLELAAKSNLKPVTLELGGKSPFIVCEDADVDKAVEMAHFALFFNQGQCCCAGSRTFVHEKVFDEFLEKARKRAANRVVGDPFLGGIEQGPQVDEEQFKKILKYIKLGIEGGATLEAGGERFGSKGYYVQPTVFSNVKDDMKIAQEEIFGPVQTILKYKEIDEVIRRANASPYGLAAGVFTQNIDTANRLTRALRVGSVWINCFDIFDAAVPFGGYKMSGHGREKGIYSLSNYLQVKAVVTPLEKPAWL 535
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 33269943 33273366 + CrPI670011_02g019800.1 Cre02g1980 491261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre02g1980 535 FunFam Aldehyde dehydrogenase, putative 497 523 - -
Cre02g1980 535 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 50 527 - GO:0004029(PANTHER)
Cre02g1980 535 CDD ALDH_F2BC 52 527 - -
Cre02g1980 535 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 301 308 IPR029510 GO:0016491(InterPro)
Cre02g1980 535 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 329 340 IPR016160 GO:0016491(InterPro)
Cre02g1980 535 Pfam Aldehyde dehydrogenase family 63 525 IPR015590 GO:0016491(InterPro)
Cre02g1980 535 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 59 330 - -
Cre02g1980 535 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 305 494 IPR016163 GO:0016620(InterPro)
Cre02g1980 535 FunFam Mitochondrial aldehyde dehydrogenase 2 307 496 - -
Cre02g1980 535 SUPERFAMILY ALDH-like 51 528 IPR016161 GO:0016491(InterPro)
Cre02g1980 535 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 59 523 IPR016162 GO:0016491(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g1980 Cre-Chr2:33269943 Cre06g2558 Cre-Chr6:33193422 1.30E-245 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre02g1980 K00128 - csv:101202756 976.081