Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cre02g2007 ATGGCTAACGCCAAAAATTCTCCCATTGCGGCTTCTGCTTCTGCAAGCAACCGGCCATCAGGTGATACTGGAAATTTTCACTCGTTAGAATGCTTCCCCAGACTTAGAGGGAAGAAAATGGTTAGCAATAGTGTTCGTTCAGCTTTGGCATGTGATGACATCCTCACTGAAATCCTCCTCCGTTTGCCAGAGAAATCTGTTTTTAAATTTATTCTTGTGTCCAAAAGATGGCTATCCTTGATTTGTAATTTTTCTTTTCGTCGTAGTTATGAAAAACAATGGGGCGCACACACTCGTCTTTTTGGCTTTTTTGTATGCAATTTTCTTTACATTGACAGACCACAAGACGGGGTGAGGCGCCCGCGGCATGAGCCTGCTCTACCTCTACTTTCAACTTGTAAAGAGAGTGATGATCTAATGTCATCTGGAATCTTAAGGAAACTTGGCTATTTTATTGACTACTCTGATGGACTTCTTCTCTGTGGCCGGCACCCTAGACATTATTATGTCTGGGATTCTGTCACCAAGTATCGATGCCAACTTCCTCAACCTCAAAAGCACTACAAATATCTATGTACCGCATTCATGACAGAAGACCCTGGTGAAGGTGGCGGAGATATCGTATATAGAGTTGTTCGGGCAAACTGTGAATGCAGAGTCGATGTAATTAACACCATCTCCATAGAGACTTTCTCCTCATTGACTTGGACATGGAAGCAATCCACTCTTGTTTGTTCTTCAGATTTTGCTTTGAGCCCGTGGACTGTGGGTACTGTGATTAATGGAGTTATCCACTGGTTTGGAACATATCGAAGTTTAGCCATTTATGATCCCGGATTTGGAGAAAGGCGCATAACTTCAATCAAGCTACCGGTCGGTCAGCTGACTCATGACTATGAGGACTCCATTTTAGGAGTGTCATCCGATGGGCTTTTGCAGTATGGTCAAAGTGGGAAGCTTGGATTGGAGACATGGGTTCTCTACAAGGAACAAGATGACTCCTCATCACCATATACCATGGACGCTCATTGCGAGTACCAGTGGAAGTTACGACATAAATTAAACTACAAAGACATGTGGAAGCAGAACCCAAATTCAGGTATTCGCTCTAAAGAACCTCAAATATTATCGTTCATTCGTCGAAACTCCGACTCTGTTTTCATTAGGTTGGGATCAAACATCTACCACTGTAACATCAGAAGCAAAACACTGGAAGTTGTTGCAAAATTATCCAAAATATACCCCAAAGATATGGAGGCTCCAGCTGGTGGGGTTGATGACATGACGAAGCTATCTTACTTGCACGAGCCTGGAGTTTTACAAAATTTAAAAATTCGATATGAACTCAATGAAATCTATACATACACTGGCAATATTCTTATTGCAATTAATCCATTCCAAAGATTGCCTCATCTTTATGATGGTCATATGATGCAACAATACAAAGGAGCACCATTTGGAGAACTGAGTCCTCATGTTTTTGCTGTTGCTGATGTTGCATACAGGGCAATGATCAATGAGGGTAAAAGCAATTCAATTCTGGTCAGTGGTGAAAGCGGAGCAGGGAAAACTGAAACCACAAAAATGCTCATGCGTCGCTTTGGTAAATTTGTTGAAATCCAGTTTGACAAGCATGGAAGAATCTCGGGAGCAGCTATCCGAACTTACCTCCTTGAGAGATCTCGTGTTTGCCAAGTTTCTGATCCTGAGCGCAATTATCATTGCTTTTACCTCCTTTGTGCTGCACCTCAGGAGGAAATTGAAAAATACAAGCTGGGAAATCCCAGGTCATTTCATTATCTAAATCAATCAAATTGCTATGAGCTGGTTGATGTAAGTGATGCTCATGACTATCTTGCCACTAGAAGAGCTATGGATGTTGTTGGAATAAGTGCTAAGGAGCAGGAAGCAATCTTTAGGGTTGTTGCTGCAATTCTTCATCTTGGAAACATTGAGTTTACTAAGGGAAAAGAAGTTGATTCATCAGTTCCAAAAGATGACAAGGCCAAGTTCCATCTTAAAATGACTTCAGAGCTTCTCATGTGTGATAATGCTGGCCTTGAAGATGCATTATGCAAGCGTGTCATGATCACCCCTGAAGAAGTGATAAAACGTAGCTTGGATCCTCAAAGTGCAGCTGTTAGTCGTGATGGTTTAGCCAAAACTATATATTCTCGACTTTTTGACTGGCTGGTTGATAAAATTAATGTCTCAATTGGACAAGATCCTAATTCCAAGTCCCTGATTGGGGTCCTTGATATCTATGGTTTTGAAAGCTTCAAAGCTAACAGTTTTGAGCAGTTCTGTATTAATTTCACAAACGAGAAGTTACAGCAACATTTCAATCAGCACGTTTTCAAAATGGAACAAGAAGAATACACGAAAGAAGAGATTGATTGGAGTTACATTGAGTTTGTCGACAACCAAGATGTGTTAGACCTCATTGAAAAGAAACCCGGTGGAATTGTGGCTCTCCTTGATGAAGCTTGCATGTTTCCAAAGTCAACACATGAGACATTTGCTAACAAGCTCTATCAGACTTTCAAAACACATAAGCGGTTTATAAAGCCAAAACTTTCTCGAACAGATTTTACCATTGCTCATTATGCTGGAGAGGTTTTATATCAATCTGAACAGTTTTTGGACAAAAACAAGGATTACGTTGTTCCTGAACATCAGGATTTGTTAGGTGCATCCAAATGTCCATTTGTTGCTGGCCTTTTCCCCCCTCTAAAAGAGGAATCTGCAAAATCTTCCAAGTTTTCTTCAATTGGGTCTCGCTTTAAGCTACAACTACAACAGTTAATGGAGACACTAAATTCCACAGAACCTCACTACATCAGATGTGTGAAGCCTAACAACCTCTTGAAACCTGCCATCTTTGAGAATGTCAACATTATGCAACAACTGCGTTGTGGTGGTGTCTTAGAAGCAATCAGAATCAGTTGTGCTGGGTACCCTACTCGCCGTGCATTCTTTGAATTCATTAACCGATTTGGAATTTTAGCTCAAGAATCCTTAGAAGGAAACTACGATGAAAAAACTGTGTGCAAAAAGATATTAGAAAAGCAGGGACTTAAAGGGTTTCAGATAGGTAAGACAAAAGTATTCCTGAGGGCTGGTCAGATGGCTGAATTAGATGCTCGGAGAGCAGAGGTATTGAGTAATGCAGCAAAGACTATTCAACGGCGCACACGAACCCATATTGCTCGTAAACAGTTCATCGCATTACGAAAGGCAACCATACACGTGCAATCTAGATGGAGAGGAAAACTGGCTTGCAAACTTTTCAAGAATTTGAAGAGGGAGGCAGCTGCTGTGAAAATTCAGAAAAATGCTCGAAGATTTCATGCGAGAACAGCCTACAAAAGACTACAAACCTCAGTGCTTTATGTGCAAACTGGTTTAAGGGCAATGGCAGCTAGGAACGGATTCAGATTTAGGAAGCAGACAAAGGCGGCAATTATCATTCAGGCTCGATGGCGTTGCCATAAAGCTGCCTCATACTATAAGAAACTTCAGAGAGGCTCAATTATTGCACAATGTAGATGGAGGGGAAAAGTTGCTAGAAAAGAACTGAGAAAACTCAAATTGGCTGCAAGGGAGACTGGTGCACTTAAAGAAGCAAAGGACAAGTTAGAAAAGAAAGTGGAGGAACTTACTTGGCGCATACAGTTAGAAAAACGCCTCAGGACGGACCTGGAAGAGGCAAAAGCTCAGGAGATTGCGAAATTACAAAATTCTTTGCAAGAACTGCAGACTAAAGTTGACGAAACTAACTCATTGCTTGTAAAGGAGCGAGAGGCTGTGAAGAAGGCTGTTGAAGAAGCACCTCCCGTTATACAAGAAACCCAAGTTCTGGTTGAAGATACCAAGAAAATTGATGCTTTGACAACAGAAGTAGAAAGCTTAAAGACCTCACTGGAGACGGAGAAAAACAGAGCTGATGAATATGAGAAAAAATGTAGTGAAGTAGAACAGTCTAGAGAAGAACAACGTAAAAAGTTAGAAGATACAGAGAAAAAAGCTCATCAGCTCCAGGAGTCATTGACCAGGCTAGAAGAGAAGCTTTCCAATTTGGAATCAGAGAATCAAGTTTTACGCCAACAAGCTGTGTCTATGGCACCTAATAAACTCCTCTCAGGACGGTCTAGATCAATTCTTCAGAGAGGTGCTGAAAGTGGTCATTACGGAGGGGAAGGGAGGACACCTTTGGATCTTCACAGCCCCTCTATTAACCAAAGGGATTCAGAAGTAGAGGATAAACCTCAAAAATCACTTAATGAGAAACAGCAAGAGAATCAAGAATTGCTCATCAGATGTATTGCACAGCACCTTGGCTTTGCAGCAAACAGGCCTATTGCTGCTTGTATCATCTACAAGTGCCTGCTTCAGTGGAGGTCATTTGAAGTCGAACGCACCAGTGTGTTTGATAGGATAATTCAAACTATAGGCCATGCAATTGAGACTCAGGATAACAATGACGTCTTGGCCTATTGGTTATCCAACGCTTCAACGCTTCTCTTACTGCTTCAGCGTACATTGAAAGCAAGTGGTGCTGCTGGAATGGCTCCGCAGCGTCGGAGATCGTCAGCTACACTATTTGGGAGGATGACTCAAAGTTTCCGAGGAGCTCCACAAGGAGTCAATCTATCCTTAATCAATGGTGGAACTAGTGGTGGAGTGGACACTTTAAGGCAAGTTGAAGCGAAGTACCCTGCTTTGCTTTTCAAGCAGCAGCTGACAGCCTATGTAGAGAAAATTTATGGAATGATTAGAGATAATCTGAAGAAAGAAATTTCTCCATTGCTTGGATTGTGCATCCAGGCACCAAGAACATCAAGGGCAAGTTTGGTGAAGGGATCTTCTCGTTCTGTTGCCAACACGGAGGCCCAGCGTGCCTTAATTGCTCACTGGCAAGGAATCGTGAAGAGCCTTGGAAACTTCTTAAACACCTTAAAAGCAAATCATGTACCCCCATTTTTGGTTCGCAAAGTCTTCATTCAAATATTTTCTTTCATCAACGTTCAACTATTCAACAGTCTTCTATTACGACGAGAATGTTGTTCATTTAGCAATGGCGAATACGTCAAAGCTGGGCTGTCTGAATTAGAGCATTGGTGCTATAAAGCTACTGATGAGTATGCAGGTTCTGCTTGGGACGAGCTAAAGCATATTAGACAAGCGATCGGGTTTCTGGTCATTCATCAGAAGCCAAAGAAGACACTAGATGAAATAAGTCACGATCTGTGTCCGGTACTAAGTATACAGCAGCTGTATCGTATAAGTACGATGTACTGGGACGACAAATATGGCACTCATAGTGTTTCACCTGATGTTATATCCAATATGAGGGTGTTAATGACCGAAGATTCAAACCATGCAATAAGCAATTCATTTCTATTGGACGACGATTCAAGCATTCCATTCTCAGTTGATGATTTATCAAAGTCTATGGAACAAATAGACATCGGAGACATCGAACCGCCACCACTGATTCGGGAGAACTCGGGCTTTAGGTTTCTTCGTAGATTCTCTCGGATATCTGCTTTCTTCCTAGGGCTCCAAAGGAATTCTGTTTTTATGGGCCCAAATCTGACTGAGGCCAGCCAGGCCGAATTGGCTTCAAGTCTTGTGGGCCCAAATTGTCCCACAGATGCACAACTTGGTGGGCTTGGCCTCGACAAGTCGAGGCTGACTGAGCCTATGGCTTGGTCAATAGCAAAAGGTCTTCATATTGTCATAGAGGAACTTCAATAA 5760 41.98 MANAKNSPIAASASASNRPSGDTGNFHSLECFPRLRGKKMVSNSVRSALACDDILTEILLRLPEKSVFKFILVSKRWLSLICNFSFRRSYEKQWGAHTRLFGFFVCNFLYIDRPQDGVRRPRHEPALPLLSTCKESDDLMSSGILRKLGYFIDYSDGLLLCGRHPRHYYVWDSVTKYRCQLPQPQKHYKYLCTAFMTEDPGEGGGDIVYRVVRANCECRVDVINTISIETFSSLTWTWKQSTLVCSSDFALSPWTVGTVINGVIHWFGTYRSLAIYDPGFGERRITSIKLPVGQLTHDYEDSILGVSSDGLLQYGQSGKLGLETWVLYKEQDDSSSPYTMDAHCEYQWKLRHKLNYKDMWKQNPNSGIRSKEPQILSFIRRNSDSVFIRLGSNIYHCNIRSKTLEVVAKLSKIYPKDMEAPAGGVDDMTKLSYLHEPGVLQNLKIRYELNEIYTYTGNILIAINPFQRLPHLYDGHMMQQYKGAPFGELSPHVFAVADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRRFGKFVEIQFDKHGRISGAAIRTYLLERSRVCQVSDPERNYHCFYLLCAAPQEEIEKYKLGNPRSFHYLNQSNCYELVDVSDAHDYLATRRAMDVVGISAKEQEAIFRVVAAILHLGNIEFTKGKEVDSSVPKDDKAKFHLKMTSELLMCDNAGLEDALCKRVMITPEEVIKRSLDPQSAAVSRDGLAKTIYSRLFDWLVDKINVSIGQDPNSKSLIGVLDIYGFESFKANSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEIDWSYIEFVDNQDVLDLIEKKPGGIVALLDEACMFPKSTHETFANKLYQTFKTHKRFIKPKLSRTDFTIAHYAGEVLYQSEQFLDKNKDYVVPEHQDLLGASKCPFVAGLFPPLKEESAKSSKFSSIGSRFKLQLQQLMETLNSTEPHYIRCVKPNNLLKPAIFENVNIMQQLRCGGVLEAIRISCAGYPTRRAFFEFINRFGILAQESLEGNYDEKTVCKKILEKQGLKGFQIGKTKVFLRAGQMAELDARRAEVLSNAAKTIQRRTRTHIARKQFIALRKATIHVQSRWRGKLACKLFKNLKREAAAVKIQKNARRFHARTAYKRLQTSVLYVQTGLRAMAARNGFRFRKQTKAAIIIQARWRCHKAASYYKKLQRGSIIAQCRWRGKVARKELRKLKLAARETGALKEAKDKLEKKVEELTWRIQLEKRLRTDLEEAKAQEIAKLQNSLQELQTKVDETNSLLVKEREAVKKAVEEAPPVIQETQVLVEDTKKIDALTTEVESLKTSLETEKNRADEYEKKCSEVEQSREEQRKKLEDTEKKAHQLQESLTRLEEKLSNLESENQVLRQQAVSMAPNKLLSGRSRSILQRGAESGHYGGEGRTPLDLHSPSINQRDSEVEDKPQKSLNEKQQENQELLIRCIAQHLGFAANRPIAACIIYKCLLQWRSFEVERTSVFDRIIQTIGHAIETQDNNDVLAYWLSNASTLLLLLQRTLKASGAAGMAPQRRRSSATLFGRMTQSFRGAPQGVNLSLINGGTSGGVDTLRQVEAKYPALLFKQQLTAYVEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLVKGSSRSVANTEAQRALIAHWQGIVKSLGNFLNTLKANHVPPFLVRKVFIQIFSFINVQLFNSLLLRRECCSFSNGEYVKAGLSELEHWCYKATDEYAGSAWDELKHIRQAIGFLVIHQKPKKTLDEISHDLCPVLSIQQLYRISTMYWDDKYGTHSVSPDVISNMRVLMTEDSNHAISNSFLLDDDSSIPFSVDDLSKSMEQIDIGDIEPPPLIRENSGFRFLRRFSRISAFFLGLQRNSVFMGPNLTEASQAELASSLVGPNCPTDAQLGGLGLDKSRLTEPMAWSIAKGLHIVIEELQ 1919
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
2 33498740 33523014 - CrPI670011_02g020070.1 Cre02g2007 491288
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cre02g2007 1919 Gene3D - 1152 1201 - -
Cre02g2007 1919 Gene3D - 1104 1151 - -
Cre02g2007 1919 Gene3D - 1052 1103 - -
Cre02g2007 1919 SMART DIL_2 1665 1772 IPR002710 -
Cre02g2007 1919 FunFam Myosin heavy chain 571 626 - -
Cre02g2007 1919 ProSiteProfiles IQ motif profile. 1077 1106 - -
Cre02g2007 1919 Pfam IQ calmodulin-binding motif 1078 1097 IPR000048 GO:0005515(InterPro)
Cre02g2007 1919 Pfam IQ calmodulin-binding motif 1056 1074 IPR000048 GO:0005515(InterPro)
Cre02g2007 1919 Pfam IQ calmodulin-binding motif 1104 1123 IPR000048 GO:0005515(InterPro)
Cre02g2007 1919 Pfam IQ calmodulin-binding motif 1151 1171 IPR000048 GO:0005515(InterPro)
Cre02g2007 1919 Pfam Myosin head (motor domain) 533 1039 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cre02g2007 1919 Pfam Myosin head (motor domain) 425 532 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cre02g2007 1919 FunFam unconventional myosin-Va 1153 1200 - -
Cre02g2007 1919 Gene3D Kinesin motor domain 533 981 IPR036961 -
Cre02g2007 1919 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 400 1104 IPR027417 -
Cre02g2007 1919 Pfam DIL domain 1666 1769 IPR002710 -
Cre02g2007 1919 Coils Coil 1196 1269 - -
Cre02g2007 1919 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1104 1202 IPR027417 -
Cre02g2007 1919 MobiDBLite consensus disorder prediction 1413 1429 - -
Cre02g2007 1919 SUPERFAMILY F-box domain 52 103 IPR036047 GO:0005515(InterPro)
Cre02g2007 1919 Gene3D - 571 629 - -
Cre02g2007 1919 SMART MYSc_2a 418 1052 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cre02g2007 1919 FunFam Myosin 2 631 746 - -
Cre02g2007 1919 MobiDBLite consensus disorder prediction 1311 1348 - -
Cre02g2007 1919 PRINTS Myosin heavy chain signature 510 535 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cre02g2007 1919 PRINTS Myosin heavy chain signature 801 829 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cre02g2007 1919 PRINTS Myosin heavy chain signature 453 472 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cre02g2007 1919 PRINTS Myosin heavy chain signature 748 776 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cre02g2007 1919 PANTHER MYOSIN 533 1150 - GO:0000146(PANTHER)|GO:0005737(PANTHER)|GO:0007015(PANTHER)|GO:0009860(PANTHER)|GO:0015629(PANTHER)|GO:0030050(PANTHER)|GO:0031982(PANTHER)|GO:0051015(PANTHER)
Cre02g2007 1919 MobiDBLite consensus disorder prediction 1 21 - -
Cre02g2007 1919 ProSiteProfiles IQ motif profile. 1150 1177 - -
Cre02g2007 1919 CDD MYSc_Myo11 437 1039 IPR036018 -
Cre02g2007 1919 ProSiteProfiles Dilute domain profile. 1478 1790 IPR002710 -
Cre02g2007 1919 Pfam F-box domain 52 88 IPR001810 GO:0005515(InterPro)
Cre02g2007 1919 CDD MyosinXI_CBD 1429 1813 IPR037975 GO:0007015(InterPro)
Cre02g2007 1919 SMART iq_5 1053 1075 IPR000048 GO:0005515(InterPro)
Cre02g2007 1919 SMART iq_5 1172 1194 IPR000048 GO:0005515(InterPro)
Cre02g2007 1919 SMART iq_5 1076 1098 IPR000048 GO:0005515(InterPro)
Cre02g2007 1919 SMART iq_5 1149 1171 IPR000048 GO:0005515(InterPro)
Cre02g2007 1919 SMART iq_5 1101 1123 IPR000048 GO:0005515(InterPro)
Cre02g2007 1919 SMART iq_5 1124 1146 IPR000048 GO:0005515(InterPro)
Cre02g2007 1919 ProSiteProfiles Myosin motor domain profile. 423 1051 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cre02g2007 1919 Gene3D - 986 1049 - -
Cre02g2007 1919 ProSiteProfiles IQ motif profile. 1054 1081 - -
Cre02g2007 1919 FunFam Class V myosin 758 893 - -
Cre02g2007 1919 MobiDBLite consensus disorder prediction 1392 1430 - -
Cre02g2007 1919 Gene3D Kinesin motor domain 383 532 IPR036961 -
Cre02g2007 1919 Coils Coil 1294 1370 - -
Cre02g2007 1919 Gene3D Myosin VI head, motor domain, U50 subdomain 631 920 - -
Cre02g2007 1919 ProSiteProfiles IQ motif profile. 1173 1202 - -
Cre02g2007 1919 ProSiteProfiles IQ motif profile. 1102 1129 - -
Cre02g2007 1919 FunFam unconventional myosin-Va 1105 1152 - -
Cre02g2007 1919 Gene3D - 758 942 - -
Cre02g2007 1919 FunFam unconventional myosin-Va 1056 1104 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g2007 Cre-Chr2:33498740 Cre03g1801 Cre-Chr3:34849199 0.00E+00 dispersed
Cre02g2007 Cre-Chr2:33498740 Cre06g0901 Cre-Chr6:2375693 0.00E+00 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre02g2007 K10357 - csv:101206606 2713.72