Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre02g2010 ATGGAACCCAATGAAAACCAGCTCAGCTCCTACTTCCACCACCATCAACACCACCATCAGAGTCCCACCACATCGCCGACCAATGGCCTTTTACCACCCACCCACCACCTCTCCTCCGCCGCCGCCGGCTCCGACGCCGGCCCTCATGTCGTATACCCTCACTCTGTCCCTTCCGCCGCCGTGTCCTCGTCTCCTCTCGAGCCCGCACGCCGGAAGAGAGGCCGGCCGAGGAAGTACGGCACGCCGGAAGAAGCTTTAGCGGCTAAAAAAGCTGCTACGGCGTCGTCTCACTCTTCGTCCTCTAAGGCTAAGAAGGAACTGGCTTCTTCTTCTTCCCTTAATGCCGTTTCCGCTTCTTCTTCCTTCTCCGCGCCTTCCAAAAAATCTCAGTTGGCTGCACTTGGTAATGCAGGCCAAGGTTTTGCGCCACATGTTATTAATGTGGCAGCTGGTGAGGATGTGGGCCAGAAAATTATGATGTTTATGCAACAATGTAAGCGGGAAATTTGTATCCTTTCTGCATCTGGTTCAATCTCCAATGCATCTCTCCGTCAGCCAGCCGCATCCGGAGGCAATATTGCATATGAGGGTCGTTTTGAGATTGTTTCGTTATGCGGATCTTATGTACGAACTGACCTCGGAGGAAAGACGGGTGGTCTTAGTGTATGTCTATCAAGTGCTGAAGGCCACATCATAGGAGGGGGAGTTGGTGGACCGTTGAAGGCTGCTGGACCCGTGCAGGTTATTGTTGGAACCTTCGTAATCGACCCCAAGAAGGAAGTTGGTGGTGGTAAAGGCGATGCATCTGCTGGCAAGTTGTCCTCACCTATTGGTGGGACCTCGATGTCAAATCTACGCTATGGCTCCAACCTTGATTCGGGAGGTAATCATGTAAGGGGAAATGATGAACACCAAGGTCTTGGAGAGAGTCATTTTTTGCTTCAGCCCCGGGGAGTGAATCTGACATCACCGCGATCAACGGATTGGAGAACGGGTCTGGATGCCACAAACACTGCTTATGATTTGACAGGAAGAACAGGCCATCATTCTCCCGAAAATGGAGATTACGATCAGATTCCCGATTGA 1086 52.03 MEPNENQLSSYFHHHQHHHQSPTTSPTNGLLPPTHHLSSAAAGSDAGPHVVYPHSVPSAAVSSSPLEPARRKRGRPRKYGTPEEALAAKKAATASSHSSSSKAKKELASSSSLNAVSASSSFSAPSKKSQLAALGNAGQGFAPHVINVAAGEDVGQKIMMFMQQCKREICILSASGSISNASLRQPAASGGNIAYEGRFEIVSLCGSYVRTDLGGKTGGLSVCLSSAEGHIIGGGVGGPLKAAGPVQVIVGTFVIDPKKEVGGGKGDASAGKLSSPIGGTSMSNLRYGSNLDSGGNHVRGNDEHQGLGESHFLLQPRGVNLTSPRSTDWRTGLDATNTAYDLTGRTGHHSPENGDYDQIPD 361
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 33570418 33576418 - CrPI670011_02g020100.1 Cre02g2010 491291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre02g2010 361 Gene3D - 143 262 - -
Cre02g2010 361 ProSiteProfiles PPC domain profile profile. 137 278 IPR005175 -
Cre02g2010 361 MobiDBLite consensus disorder prediction 316 344 - -
Cre02g2010 361 Pfam Plants and Prokaryotes Conserved (PCC) domain 143 253 IPR005175 -
Cre02g2010 361 CDD DUF296 143 253 IPR005175 -
Cre02g2010 361 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 33 269 IPR039605 GO:0003680(InterPro)
Cre02g2010 361 MobiDBLite consensus disorder prediction 261 361 - -
Cre02g2010 361 MobiDBLite consensus disorder prediction 1 105 - -
Cre02g2010 361 SUPERFAMILY AF0104/ALDC/Ptd012-like 140 254 - -
Cre02g2010 361 MobiDBLite consensus disorder prediction 274 296 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g2010 Cre-Chr2:33570418 Cre08g0864 Cre-Chr8:21782933 7.60E-40 dispersed
Cre02g2008 Cre-Chr2:33535797 Cre02g2010 Cre-Chr2:33570418 4.20E-20 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre02g2010 - - - 0.0