Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre02g2010 | ATGGAACCCAATGAAAACCAGCTCAGCTCCTACTTCCACCACCATCAACACCACCATCAGAGTCCCACCACATCGCCGACCAATGGCCTTTTACCACCCACCCACCACCTCTCCTCCGCCGCCGCCGGCTCCGACGCCGGCCCTCATGTCGTATACCCTCACTCTGTCCCTTCCGCCGCCGTGTCCTCGTCTCCTCTCGAGCCCGCACGCCGGAAGAGAGGCCGGCCGAGGAAGTACGGCACGCCGGAAGAAGCTTTAGCGGCTAAAAAAGCTGCTACGGCGTCGTCTCACTCTTCGTCCTCTAAGGCTAAGAAGGAACTGGCTTCTTCTTCTTCCCTTAATGCCGTTTCCGCTTCTTCTTCCTTCTCCGCGCCTTCCAAAAAATCTCAGTTGGCTGCACTTGGTAATGCAGGCCAAGGTTTTGCGCCACATGTTATTAATGTGGCAGCTGGTGAGGATGTGGGCCAGAAAATTATGATGTTTATGCAACAATGTAAGCGGGAAATTTGTATCCTTTCTGCATCTGGTTCAATCTCCAATGCATCTCTCCGTCAGCCAGCCGCATCCGGAGGCAATATTGCATATGAGGGTCGTTTTGAGATTGTTTCGTTATGCGGATCTTATGTACGAACTGACCTCGGAGGAAAGACGGGTGGTCTTAGTGTATGTCTATCAAGTGCTGAAGGCCACATCATAGGAGGGGGAGTTGGTGGACCGTTGAAGGCTGCTGGACCCGTGCAGGTTATTGTTGGAACCTTCGTAATCGACCCCAAGAAGGAAGTTGGTGGTGGTAAAGGCGATGCATCTGCTGGCAAGTTGTCCTCACCTATTGGTGGGACCTCGATGTCAAATCTACGCTATGGCTCCAACCTTGATTCGGGAGGTAATCATGTAAGGGGAAATGATGAACACCAAGGTCTTGGAGAGAGTCATTTTTTGCTTCAGCCCCGGGGAGTGAATCTGACATCACCGCGATCAACGGATTGGAGAACGGGTCTGGATGCCACAAACACTGCTTATGATTTGACAGGAAGAACAGGCCATCATTCTCCCGAAAATGGAGATTACGATCAGATTCCCGATTGA | 1086 | 52.03 | MEPNENQLSSYFHHHQHHHQSPTTSPTNGLLPPTHHLSSAAAGSDAGPHVVYPHSVPSAAVSSSPLEPARRKRGRPRKYGTPEEALAAKKAATASSHSSSSKAKKELASSSSLNAVSASSSFSAPSKKSQLAALGNAGQGFAPHVINVAAGEDVGQKIMMFMQQCKREICILSASGSISNASLRQPAASGGNIAYEGRFEIVSLCGSYVRTDLGGKTGGLSVCLSSAEGHIIGGGVGGPLKAAGPVQVIVGTFVIDPKKEVGGGKGDASAGKLSSPIGGTSMSNLRYGSNLDSGGNHVRGNDEHQGLGESHFLLQPRGVNLTSPRSTDWRTGLDATNTAYDLTGRTGHHSPENGDYDQIPD | 361 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 33570418 | 33576418 | - | CrPI670011_02g020100.1 | Cre02g2010 | 491291 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre02g2010 | 361 | Gene3D | - | 143 | 262 | - | - | |
Cre02g2010 | 361 | ProSiteProfiles | PPC domain profile profile. | 137 | 278 | IPR005175 | - | |
Cre02g2010 | 361 | MobiDBLite | consensus disorder prediction | 316 | 344 | - | - | |
Cre02g2010 | 361 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 143 | 253 | IPR005175 | - | |
Cre02g2010 | 361 | CDD | DUF296 | 143 | 253 | IPR005175 | - | |
Cre02g2010 | 361 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 | 33 | 269 | IPR039605 | GO:0003680(InterPro) | |
Cre02g2010 | 361 | MobiDBLite | consensus disorder prediction | 261 | 361 | - | - | |
Cre02g2010 | 361 | MobiDBLite | consensus disorder prediction | 1 | 105 | - | - | |
Cre02g2010 | 361 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 140 | 254 | - | - | |
Cre02g2010 | 361 | MobiDBLite | consensus disorder prediction | 274 | 296 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre02g2010 | Cre-Chr2:33570418 | Cre08g0864 | Cre-Chr8:21782933 | 7.60E-40 | dispersed | |
Cre02g2008 | Cre-Chr2:33535797 | Cre02g2010 | Cre-Chr2:33570418 | 4.20E-20 | proximal |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre02g2010 | - | - | - | 0.0 |