Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre02g2024 ATGGCGGGTAATGGGGTTTTTGCAGAGATTCTCGATGGTGAAGTCTACAAATACTATTCCGAAGGTGAGTGGAAGAAATCCTCCTCCGGGAAAACCGTTGCCATTATCAACCCCACTACAAGGAAGACTCAGTACAGAGTTCAAGCTTGCAACCAAGAGGAGGTTAATAAAGTGATGGAAATAGCCAAAACTGCTCAAAAATCATGGGCAAAGACTCCATTGTGGAAGAGAGCAGAGCTTCTTCATAAAGCTGCTGCAATTTTGAAAGAACACAAAGCTCCCATTGCTGAGTGTTTGGTGAAGGAAATTGCAAAACCAGCCAAAGATGCAGTGACTGAGGTCGTGAGGTCTGGGGATCTTGTTTCATATTGTGCTGAAGAAGGTGTTAGGATCTTGGGAGAGGGGAAGTTCTTGGTTTCTGACAGTTTCCCTGGAAATGAAAGGACCAAATATTGCCTTACTTCCAAGATCCCTCTTGGTGTGATTTTAGCCATTCCTCCATTCAACTATCCTGTAAATTTGGCTGTTTCAAAAATTGCCCCGGCTTTGATTGCTGGAAATTCTATCGTCCTCAAGCCTCCAACTCAGGGAGCTGTTTCTGCTCTCCACATGGTACATTGCTTCCACCTAGCTGGTTTTCCTAAAGGCCTCATTAGTTGTGTCACTGGAAAAGGTTCCGAGATCGGTGATTTCCTCACGATGCATCCGGGTGTCGACTGTATAAGCTTTACCGGTGGGGATACTGGTATTGCAATTTCAAAGAAGGCAGGCATGATACCTCTTCAGATGGAACTGGGAGGCAAAGACGCGTGCATTGTGCTCGAGGATGCAGATCTCGATTTAGTTGCTGCTAACATCATAAAGGGAGGCTTTTCTTACAGTGGCCAAAGGTGTACAGCCGTAAAGGTTGTTTTGGTAATGGAGTCTGTCGCAGATGCTTTGGTCGAGAAAGTAAAGGCACGGGTGGCTAAATTAACCGTTGGTGCTCCTGAAGACGACTCAGACATTACTCCAGTTGTGACTGAGTCGTCAGCGAATTTCATTGAAGGGTTGGTAATGGATGCAAAGGAAAAGGGAGCAACATTTTGCCAAGAGTACAGAAGAGAGGGCAACCTCATTTGGCCCTTGTTATTAGATAATGTTAGGCCTGATATGAGGATTGCATGGGAGGAACCTTTTGGACCAGTCTTGCCAGTCATTAGGATCAGTTCTATTGAAGAAGGAATCCACCATTGTAATGCTAGCAACTTTGGACTTCAGGGATGTGTATTCACAAAGGACATCAACAAGGCGATATTGATAAGTGACGCGATGGAAACTGGAACAGTTCAAATCAACTCTGCACCTGCTCGAGGACCTGATCATTTCCCATTCCAGGGAATCAAGGACAGCGGAATTGGTTCTCAAGGTGTTACCAACAGCATCAACATGATGACCAAAGTGAAGACCACAGTTATCAACTTGCCAACACCTTCCTACACCATGGGAACCAAGTCACTTAGTAAGAGAGCCCTAGGGTCCAAATTGTGA 1530 45.29 MAGNGVFAEILDGEVYKYYSEGEWKKSSSGKTVAIINPTTRKTQYRVQACNQEEVNKVMEIAKTAQKSWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVILAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVSALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVDCISFTGGDTGIAISKKAGMIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADALVEKVKARVAKLTVGAPEDDSDITPVVTESSANFIEGLVMDAKEKGATFCQEYRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRISSIEEGIHHCNASNFGLQGCVFTKDINKAILISDAMETGTVQINSAPARGPDHFPFQGIKDSGIGSQGVTNSINMMTKVKTTVINLPTPSYTMGTKSLSKRALGSKL 509
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 33729693 33734828 - CrPI670011_02g020240.1 Cre02g2024 491305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre02g2024 509 SUPERFAMILY ALDH-like 15 487 IPR016161 GO:0016491(InterPro)
Cre02g2024 509 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 22 483 IPR016162 GO:0016491(InterPro)
Cre02g2024 509 FunFam NADP-dependent glyceraldehyde-3-phosphate dehydrogenase 267 457 - -
Cre02g2024 509 PANTHER ALDEHYDE DEHYDROGENASE 9 495 IPR051020 GO:0008911(PANTHER)
Cre02g2024 509 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 263 270 IPR029510 GO:0016491(InterPro)
Cre02g2024 509 FunFam NADP-dependent glyceraldehyde-3-phosphate dehydrogenase 22 281 - -
Cre02g2024 509 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 291 302 IPR016160 GO:0016491(InterPro)
Cre02g2024 509 Pfam Aldehyde dehydrogenase family 24 483 IPR015590 GO:0016491(InterPro)
Cre02g2024 509 CDD ALDH_F11_NP-GAPDH 15 487 - -
Cre02g2024 509 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 267 457 IPR016163 GO:0016620(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g2024 Cre-Chr2:33729693 Cre06g1221 Cre-Chr6:6087745 7.60E-46 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre02g2024 K00131 - csv:101208699 961.444