Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre02g2054 TTCAACCTCCTCCACTTTCTCAAACAAACCATTTTCATTTTTAACAAACAAACCAAAACCTCTTCCCTTCCCCTTCCCCTTCCCCTTCTGCTTTCACTCCTCATTTTCTCCAGATGTCTTCTTAATTTTGTGGAGCTGAAGAGTAAATGGGGAGCTGTTTGTCTACTGGCAATCAGAATAGTTGCAGAAGTGGAAGGAATGGAGAGAGAGTTTCTGGATCCTGTTTGGGAAGTGGAACTTGTTTATAATGGGAAGACTCGAAATTCTTGTATTTTCACTCAGCAGGGTCGAAAGGGTATAAACCAAGACGCTATGGTTGTATGGGAAGACTTCATATCAGATGGTGCAATTTTCTGTGGGGTATTTGATGGCCACGGTCCTCATGGTCATGTCGTTGCACGAAAAGTTAGAGATGTTCTGCCAAGAAAGCTAGTGTCATTCTGGCAGTCATCTCAGTTGAAGCATAATAGATCAGATAGAACTTCTTGTCTCCCGTGGAGTCAGAAGGATTCAGCAGATGGTGAAGGACAGAACATAGATGCCTCAGAGGAGGATAAATCAAGTTCTTTATGGAGAAGAGCTTTCCTCAAATCATATAAAGCCATGGATAAGGAGCTCAAGTCTCATCCCAAATTGGACTGTTTCTGTAGTGGCAGTACCGCAGTTACTCTAGTGAAGCAGGGCTCAGATCTATTTGTGGGAAGTATCGGGGATTCTCGAGCGATTCTTGGATCTAAAGACAGCAGTGATTCCCTTGTAGCAACCCAGTTGACAGTAGATCTAAAGCCTGATTTACCCAGAGAAGCTGAAAGGATAAAGAAGTGTAAAGGAAGGGTATTTGCATTGCACGACGAGCCAGAAGTGCCAAGAGTGTGGCTGCCATTTGACAATGCACCTGGATTAGCAATGGCTCGAGCATTTGGCGACTTCTGTTTGAAGGACTATGGAGTTATCTCCATCCCTGAGTTCTCACACCGTGTGCTTACAAATAATGATTTGTTTGTTGTCCTTGCTTCAGATGGGGTTTGGGACGTATTGAGCAATGAAGAGGTGGTCGAGATAGTCTATTCTGCCTCAACTCGGTCATCGGCAGCCCGAATGGTGGTAGACTCAGCTGCTCGAGAGTGGAAACTCAAGTATCCTACTTCGAAAATGGATGACTGTGCTGTCGTCTGCCTATTCTTGGACGGGAAAGTGGATTCAGAATCAGAAAATGAAGAACAAGCTTCTTCTGCAATTCTTCAAACCAACCAAATGGGTCACACCGCAGAATTGGATGATGAGCAGCAGTGGTCTGAGCCAAGTTTGCAAAGGAATTATACGGTCCGATCGTCAGAAGAAAAAGACCAAATTGGAGGATTATCTTCTTCACATAATGAAGAGAATGGAGAACCAATATCTGCTGAAGATGATAATTGGTTGGGACTGGAGGGTGTAACAAGAGTAAACTCTTTGGTTCAACTCCCTAGATTTTCTTGA 1479 43.88 FNLLHFLKQTIFIFNKQTKTSSLPLPLPLLLSLLIFSRCLLNFVELKSKWGAVCLLAIRIVAEVEGMEREFLDPVWEVELVYNGKTRNSCIFTQQGRKGINQDAMVVWEDFISDGAIFCGVFDGHGPHGHVVARKVRDVLPRKLVSFWQSSQLKHNRSDRTSCLPWSQKDSADGEGQNIDASEEDKSSSLWRRAFLKSYKAMDKELKSHPKLDCFCSGSTAVTLVKQGSDLFVGSIGDSRAILGSKDSSDSLVATQLTVDLKPDLPREAERIKKCKGRVFALHDEPEVPRVWLPFDNAPGLAMARAFGDFCLKDYGVISIPEFSHRVLTNNDLFVVLASDGVWDVLSNEEVVEIVYSASTRSSAARMVVDSAAREWKLKYPTSKMDDCAVVCLFLDGKVDSESENEEQASSAILQTNQMGHTAELDDEQQWSEPSLQRNYTVRSSEEKDQIGGLSSSHNEENGEPISAEDDNWLGLEGVTRVNSLVQLPRFS 492
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 34011208 34014178 - CrPI670011_02g020540.1 Cre02g2054 491335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre02g2054 492 Gene3D - 79 397 IPR036457 -
Cre02g2054 492 CDD PP2Cc 94 395 IPR001932 -
Cre02g2054 492 ProSiteProfiles PPM-type phosphatase domain profile. 88 395 IPR001932 -
Cre02g2054 492 MobiDBLite consensus disorder prediction 423 462 - -
Cre02g2054 492 SUPERFAMILY PP2C-like 86 397 IPR036457 -
Cre02g2054 492 PANTHER PROTEIN PHOSPHATASE 90 394 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cre02g2054 492 MobiDBLite consensus disorder prediction 423 473 - -
Cre02g2054 492 SMART PP2C_4 77 393 IPR001932 -
Cre02g2054 492 FunFam probable protein phosphatase 2C 52 79 398 - -
Cre02g2054 492 MobiDBLite consensus disorder prediction 159 175 - -
Cre02g2054 492 MobiDBLite consensus disorder prediction 159 185 - -
Cre02g2054 492 Pfam Protein phosphatase 2C 179 372 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g2054 Cre-Chr2:34011208 Cre10g0602 Cre-Chr10:5556265 2.40E-113 dispersed
Cre05g1940 Cre-Chr5:31583701 Cre02g2054 Cre-Chr2:34011208 1.30E-73 transposed
Cre02g0457 Cre-Chr2:1823589 Cre02g2054 Cre-Chr2:34011208 6.40E-170 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre02g2054 - - - 0.0