Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre02g2094 | ATGCTCCGATCCGCTCCTGGAATGGAGGATCAGCGAGATGATGTTGCACCATCAGAGCAAGGGCCTTCCAATGCTTCCTGGTGGTCTTCTGATTTTGAGGAGAAATTTGGATCTGTTTCTTTGGGCCCTCGGGAAGATATTGTAAGTGAAAAGGAAGAGATCATCAATTCTGACCAAGATGTGTTATTGTCGCCTCAGAGAGCTTCTCAAATTCTCTGGGGTACTGGAATGCTTTGTGAACCAATTCCAGATGGGTTCTATTCTGTTATTCCGGATAAAAGGCTGAAAGAGCGGTTTCACAGTATTCCTTCGCTGGATGAGCTTCGTGCTTTGGAGGCCGAAGGTTACAGAAACGATGTTATTCTTGTGGAGACAGAGAAAGATAAAAAGCTTTCTATGCTGAAGCAACTGATCTTGACACTGGTTAAAGGATTGAGTTCAAATCCAGCTGCAATTATCAAGAAGATTGCTGGACTGGTTTCTGATTTTTATAAACGACCAATTTTAGAAAGTCCAGCAAAAGCTGCTCTAGAAGAAAACTCCCACTTGTTCGAGGATAGAGGCATTCAATTACTTGGACAAATAAAATTTGGTTCTTGCCGTCCAAGAGCTATCTTATTTAAGGCTCTGGCGGACACTGTAGGGCTTGAAAGCCGTCTCATGGTGGGCTTGCCTAATGAGGGGGCTATTGGGTGCGTGGACTCATACAAGCATATGTCTGTGACAGTTGTGTTGAATTCTGTGGAACTAGTTGTTGATCTGATGCGATTCCCTGGCCAGTTGTTACCTCGGTCAACTAAGGCAATTTTTATGACCCATATTTCCGCTGCTGGTGAAAGCGATTCTGCAGAAAACGATTCCTGTGATTCACCACTAGAACCTAATAGTCCTCTTTATGGTTTCTCAGAAAGAGTTGATCCTGACAGTGCTGAGAAAGATGAGAGCCTTCAATTCCACAGAAAATTTGAAGCAGCTTCAAATGCATATGGTCATTCATTGCGCAACATGATGCTGCGATCAAGTACAACACTTGACAGGAAACTGAGTTTATCACATAGTGAACCTAACATTGCAAATGCATTTTGGCGACGTAGTCGGAGAAAGGATATTGCTGAACAGCGGACTGCTAGTTCAAGTCCAGAGCATCCTTCATTTCGGGCGCGTGGCCGGTCTATGCTTAGTGGGGATAGGAAAGCCTTCAGAGATTTTTCTGATGATGTCTCTACTTCAAGATCAGATGGCGCTTCAACTTCAACTTCAGAAGCACGTAGATTAAGAAGAAGGAGCATCAGCATTACTCCAGAGATTGGTGATGATATCGTGAGGGCTGTACGAGCAATGAGTGAAACATTGAAGCAAAATCGTCTTTTGAGAGGGCAAGAAGATGACAGGTCGTTCTCCCACCCTTCAAATGAAAGAAATAGTAGTTCAGATGTTCAGAGAAATGATCAAGTGGGCTCTCAAAGAGCAATATCATTACCATCATCGCCACATGTGTATAGGGGTCAAACCTCTGATAGAATTGGGCATTCAGCATATCCGAATCATGAATTAGCCTCAAAATGGACTAAAGTTCTTGAATCTTTCTCCTTGAATGACAAACCACTATTACCTTACCCAGAGTGGAACATCGATTACTCAGAACTGACCGTTGGAATCCGTATTGGAATTGGGTTTTTTGGAGAAGTTTTTCGTGGCATTTGGAATGGAACAGATGTGGCAATCAAAGTTTTCCTAGAGCAAGATCTAACTCCTGAAAACATTGAAGACTTCTGTAACGAGATATCAATTCTTAGTCGTCTTCGACATCCTAATGTTATACTATTTCTGGGGGCATGCACAAAGCCGCCACGGTTATCAATGATCACCGAATACATGGAGATGGGTTCCTTGTATTCCTTGATCCATTTGAGTGGTCAGAAGAAAAAACTTAGCTGGCGGAGGAGACTGAAGATGTTGCGTGACATATGCAGGGGTTTGATGTGCATACACAGAATGAAAATAGCTCATCGGGACCTAAAAAGTGCAAATTGCCTAGTGAACAAGCACTGGACCGTCAAGATATGTGATTTTGGACTTTCAAGAATATTGACAGATGCTCCAGCAAGAGGGTCTCCATCTGCAGGAACTCCAGAATGGATGGCTCCTGAGCTCTTTCGAAATGAGCCCTTCACTGAAAAGTGTGATATTTTCAGCCTGGGGGTCATTATGTGGGAGCTATGCACGCTAAATAGACCATGGGAGGGTGTTCCACCGGAGCGGGTAGTTTATGCTGTTGGCACTGAGGGATCCCGCCTCGAGATTCCCGAAGGCCCGCTTGGCAGACTTATATCAGATTGTTGGGCGGAACCAAATGAACGGCCAAGCTGCGAAGAGATTCTCTCACGCTTGCTGGACTGCGACAAGAGACCATCTCAGTTTCCGAGTCCAAAACTTGAATGCATTTCAATTGCTTTACGTGTAAGAACTGAGAAGAATCTTGGTTCGTTTACTTGCTCTGCATTATTGCCATTTCTCGTGTATTCTTTACTTCCCAGTCAAGCAAGATCGTTGGAAGGGACCCTCCTCTCCACGTCTCTCTTTTACCAACCAACACACCTCCACACCATCTTCCGCTGGCCACTGCTTCACCTCCCTCCCGCTTACCTTTATTGCTTGCTGCACGTCCGGTCGCCAGCTGTTGGTCACCGATTGCCTCTTCTCTCTCTCTATCTTTCTTTCCCTCAACATCTCTCTCTTTCACCAACTAGCACTGTTCCACACCATTTGTCGCTGGTCACCGCTTCACCTCCTGGCGCTTACCTCTGTTGA | 2811 | 44.86 | MLRSAPGMEDQRDDVAPSEQGPSNASWWSSDFEEKFGSVSLGPREDIVSEKEEIINSDQDVLLSPQRASQILWGTGMLCEPIPDGFYSVIPDKRLKERFHSIPSLDELRALEAEGYRNDVILVETEKDKKLSMLKQLILTLVKGLSSNPAAIIKKIAGLVSDFYKRPILESPAKAALEENSHLFEDRGIQLLGQIKFGSCRPRAILFKALADTVGLESRLMVGLPNEGAIGCVDSYKHMSVTVVLNSVELVVDLMRFPGQLLPRSTKAIFMTHISAAGESDSAENDSCDSPLEPNSPLYGFSERVDPDSAEKDESLQFHRKFEAASNAYGHSLRNMMLRSSTTLDRKLSLSHSEPNIANAFWRRSRRKDIAEQRTASSSPEHPSFRARGRSMLSGDRKAFRDFSDDVSTSRSDGASTSTSEARRLRRRSISITPEIGDDIVRAVRAMSETLKQNRLLRGQEDDRSFSHPSNERNSSSDVQRNDQVGSQRAISLPSSPHVYRGQTSDRIGHSAYPNHELASKWTKVLESFSLNDKPLLPYPEWNIDYSELTVGIRIGIGFFGEVFRGIWNGTDVAIKVFLEQDLTPENIEDFCNEISILSRLRHPNVILFLGACTKPPRLSMITEYMEMGSLYSLIHLSGQKKKLSWRRRLKMLRDICRGLMCIHRMKIAHRDLKSANCLVNKHWTVKICDFGLSRILTDAPARGSPSAGTPEWMAPELFRNEPFTEKCDIFSLGVIMWELCTLNRPWEGVPPERVVYAVGTEGSRLEIPEGPLGRLISDCWAEPNERPSCEEILSRLLDCDKRPSQFPSPKLECISIALRVRTEKNLGSFTCSALLPFLVYSLLPSQARSLEGTLLSTSLFYQPTHLHTIFRWPLLHLPPAYLYCLLHVRSPAVGHRLPLLSLYLSFPQHLSLSPTSTVPHHLSLVTASPPGAYLC | 936 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 34420950 | 34436385 | - | CrPI670011_02g020940.1 | Cre02g2094 | 491375 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre02g2094 | 936 | Gene3D | Transferase(Phosphotransferase) domain 1 | 628 | 816 | - | - | |
Cre02g2094 | 936 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - | |
Cre02g2094 | 936 | MobiDBLite | consensus disorder prediction | 280 | 313 | - | - | |
Cre02g2094 | 936 | SMART | serkin_6 | 549 | 798 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre02g2094 | 936 | MobiDBLite | consensus disorder prediction | 455 | 469 | - | - | |
Cre02g2094 | 936 | MobiDBLite | consensus disorder prediction | 470 | 502 | - | - | |
Cre02g2094 | 936 | MobiDBLite | consensus disorder prediction | 1 | 16 | - | - | |
Cre02g2094 | 936 | FunFam | Serine/threonine-protein kinase isoform 1 | 540 | 627 | - | - | |
Cre02g2094 | 936 | ProSiteProfiles | Protein kinase domain profile. | 549 | 812 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre02g2094 | 936 | MobiDBLite | consensus disorder prediction | 369 | 426 | - | - | |
Cre02g2094 | 936 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 668 | 680 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cre02g2094 | 936 | Pfam | Ethylene-responsive protein kinase Le-CTR1 | 66 | 261 | - | - | |
Cre02g2094 | 936 | PANTHER | SERINE-THREONINE PROTEIN KINASE | 328 | 798 | IPR050167 | GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER) | |
Cre02g2094 | 936 | MobiDBLite | consensus disorder prediction | 391 | 408 | - | - | |
Cre02g2094 | 936 | MobiDBLite | consensus disorder prediction | 453 | 507 | - | - | |
Cre02g2094 | 936 | CDD | STKc_MAP3K-like | 555 | 797 | - | - | |
Cre02g2094 | 936 | Gene3D | Phosphorylase Kinase; domain 1 | 542 | 627 | - | - | |
Cre02g2094 | 936 | ProSitePatterns | Protein kinases ATP-binding region signature. | 555 | 576 | IPR017441 | GO:0005524(InterPro) | |
Cre02g2094 | 936 | SUPERFAMILY | Protein kinase-like (PK-like) | 525 | 797 | IPR011009 | - | |
Cre02g2094 | 936 | Pfam | Protein tyrosine and serine/threonine kinase | 551 | 797 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre02g2094 | Cre-Chr2:34420950 | Cre05g1949 | Cre-Chr5:31636477 | 7.90E-73 | dispersed | |
Cre02g2094 | Cre-Chr2:34420950 | Cre10g2049 | Cre-Chr10:35190531 | 4.30E-71 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
63887 | PF07714 | PK_Tyr_Ser-Thr | 5.90E-59 | CL0016 | Cre | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre02g2094 | - | - | - | 0.0 |