Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre02g2146 ATGGAAAATAGTCGAGGCCAAAGTGGTCAAGTTGGGCCAAATGTCCCAACTCACCTCGACCTCAGCCATGGAGGGAAAGTTAGGCCTTTTGTTCCAACACCTCTACTTTCTCTAGATCTTGGAGCTTCCATTTCATCGGTCGATTCCGAGTTATTTCGCCGCTTTAATTCTAAAGGGAATTTGAGATTGAGGGGGAGGTGTAGATTTCTAGGTGTCATTGGAATTCTTTGTGTAAAAATAGAAGTGGGGGGTCGATTTGCTTTAGGTTTATTGGGTTTTGGTTTGATGGAGGATTGGGGAAGGTTCATGGAAAAGTGGGCTTCTGCACTTGTGATCCGAATGCAGCAAGATCAAGCCAAAAAGAATTCAACCGAAGTGGAGTTCTTTTCTGATTATGGCGATGCGAGTAGATACAAAATTCAGGAAGTAATCGGGAAAGGAAGCTATGGGGTTGTCTGTTCCGCAATTGACACCCGCACCGGCGACAAGGTTGCAATAAAGAAGATACATAATATTTTTGAGCATATATCTGACGCGGTTAGAATTCTTCGTGAGATAAAGCTGCTTAGACTTCTTCGCCATCCTGATATTGTTGAAATTAAACACATTATGCTGCCACCTTCAAGGAGGGATTTCAAAGACATCTACGTTGTTTTCGAGCTCATGGAATCAGATCTCCACCAAGTTATTAAAGCAAATGATGATCTGACTCGAGAACATTATCAGTTTTTCCTTTACCAACTTCTTCGTGCATTAAAATATATCCACACAGCGAATGTCTACCACCGTGATTTAAAACCAAAGAATATATTAGCAAATGCAAATTGTAAACTTAAAATTTGTGATTTTGGATTAGCAAGAGTTGCCTTCAGTGACACACCAACTACAATTTTCTGGACGGATTATGTTGCTACTAGATGGTACCGAGCTCCAGAGCTGTGTGGTTCATTTTTCTCGAAGTATACACCTGCAATTGATATATGGAGTATTGGCTGCATATTTGCTGAAGTATTAATGGGGAAGCCACTTTTTCCTGGTAAAAACGTTGTCCACCAGCTCGATTTGATGACAGATCTCCTTGGAACTCCTTCATTAGATACAATCTCCAGGGTACGTAATGACAAGGCTAGAAGATATTTAACTACTATGAGGAAAAAGCAGCCGGTACCATTTTCTCAAAAGTTCCCAAATGCAGATCCATTAGCGCTGAGGCTACTAGAAAGACTGCTTGCTTTTGATCCAAAAGATAGACCAACTGCTGAAGAGGCACTGGCTGATCCATACTTCAAGGGATTGGCAAAAATTGAGAGGGAACCTTCCTGCCAGCCAATCACAAAGATGGAATTTGAATTTGAGAGACGGAGGGTCACAAAAGAAGACATTCAAGAGCTAATCTTCCGGGAGATACTAGAATATCATCCTCAGCTACTAAAAGACTACATGAATGGGACGGAGAGAACGAATTTTCTATATCCAAGTGCTGTTGACCAATTTAGAAAGCAGTTTGCGCATCTGGAGGAAAATGGTGGTAAAAGTGCGCCAGTTATTCCTCTTGACAGAAAGCATGTGTCCCTTCCAAGGTCAACAGTTGTACACTCGAACCCGGTCTATTCTAAGGACCAAGTAAATAATGTAACTCTCCAAGATGGGAAGATCTCCGAAGAGGCATACAGCAAGAATTCCCGAGATAGTGAAGGACGGCTAACAAATATATCGAGGGCCATGCAGGCACCACAAAAAATCCCATTTGCAGCTAAGCCTGGAAGAGTGGTTGGACCGGTTATAGCAGATGAGAATGGGAGGCTGGTGAAGGAACCATACGATCCAAGAACGTTGATCAGAGGTGCCGTTCTTCCTCCTGCATATCACTACCACCAAAAACCCGTTGCTGGAAATCAAGAAAGATCTGCAGCAGAAACTAAACTTGATATTTCTTTAAGGGCCGCTAAGCAAGCATCCCAGTGTGGCATGGCTTCCAAATTAGGATCAGATATTGCCATCAGCATCGACTCGAACCCCTTTTACATGACACGTGCCGGAGTGAACAAGGTCGAACTCAAGGACCAAATATCCATCGATGCAAACTTTCTTCAGGCCAAGGCCGCCCAATACGGTGGTCTTAGTGCAGCAACAGCCACCGCCACATCGGTTGCTCACAGAAAGGTGGTTGCTGGTCAGTTTAGCATGACGAAGATGTACTAA 2202 43.23 MENSRGQSGQVGPNVPTHLDLSHGGKVRPFVPTPLLSLDLGASISSVDSELFRRFNSKGNLRLRGRCRFLGVIGILCVKIEVGGRFALGLLGFGLMEDWGRFMEKWASALVIRMQQDQAKKNSTEVEFFSDYGDASRYKIQEVIGKGSYGVVCSAIDTRTGDKVAIKKIHNIFEHISDAVRILREIKLLRLLRHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFSDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLMGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTTMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAKIEREPSCQPITKMEFEFERRRVTKEDIQELIFREILEYHPQLLKDYMNGTERTNFLYPSAVDQFRKQFAHLEENGGKSAPVIPLDRKHVSLPRSTVVHSNPVYSKDQVNNVTLQDGKISEEAYSKNSRDSEGRLTNISRAMQAPQKIPFAAKPGRVVGPVIADENGRLVKEPYDPRTLIRGAVLPPAYHYHQKPVAGNQERSAAETKLDISLRAAKQASQCGMASKLGSDIAISIDSNPFYMTRAGVNKVELKDQISIDANFLQAKAAQYGGLSAATATATSVAHRKVVAGQFSMTKMY 733
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 35036044 35043656 - CrPI670011_02g021460.1 Cre02g2146 491427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre02g2146 733 SMART serkin_6 138 429 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre02g2146 733 SUPERFAMILY Protein kinase-like (PK-like) 134 433 IPR011009 -
Cre02g2146 733 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 135 470 IPR050117 GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER)
Cre02g2146 733 Gene3D Transferase(Phosphotransferase) domain 1 224 452 - -
Cre02g2146 733 ProSiteProfiles Protein kinase domain profile. 138 429 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre02g2146 733 ProSitePatterns Protein kinases ATP-binding region signature. 144 168 IPR017441 GO:0005524(InterPro)
Cre02g2146 733 Pfam Protein kinase domain 138 429 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre02g2146 733 FunFam Mitogen-activated protein kinase 128 231 - -
Cre02g2146 733 CDD STKc_TDY_MAPK 137 474 - -
Cre02g2146 733 ProSitePatterns MAP kinase signature. 173 276 IPR003527 GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre02g2146 733 FunFam Mitogen-activated protein kinase 224 452 - -
Cre02g2146 733 Gene3D Phosphorylase Kinase; domain 1 153 475 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g2146 Cre-Chr2:35036044 Cre07g1403 Cre-Chr7:28935437 4.70E-206 dispersed
Cre06g1328 Cre-Chr6:7231211 Cre02g2146 Cre-Chr2:35036044 9.00E-213 transposed
Cre01g0247 Cre-Chr1:1812366 Cre02g2146 Cre-Chr2:35036044 1.00E-249 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63890 PF00069 Pkinase 2.20E-66 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre02g2146 - - - 0.0