Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre02g2149 ATGTGGATCCTTTTCCGGAAAAAATCTAAGAGATCTGTGGACAAATTCCCTATTACCCAAATACCTAATTTTTCAAAAGATATCAGGATAGATCAGGTTGGGATTCAAATTCCCAATGACCACCCTGAAAATAGACTTCTTTCAGTTGATGTCAAAAGAAATGAAGAAAATTCAGAAGTTATGGCTGTGACAAAATCAAGTGAACATGATAACCATAGCCAATGCAGTTCCACTTACCAACATGAAAAAGCTGGCAATTCACAATCAGGGGAAGAAGGAAGCTCTGGAAATGCTAGGAAGCAGGCTTCAAGGTCGTATGGAGGATATGGAGGAATTGTGCCACCGTCTCCTCTCGTTGGCTTGCCAGAAATCTCACATCTTGGGTGGGGCCACTGGTTCACTCTCAGGGATCTAGAGCTTGCAACTAATCGCTTTTCTACCGAAAATATTCTTGGGGAAGGGGGATATGGGGTTGTGTATAAGGGCAGACTCATCAATGGCACTGAGGTTGCAGTGAAAAAACTACTCAATAATCTGGGTCAGGCAGAGAAAGAATTTAGAGTTGAAGTGGAGGCTATTGGTCACGTTCGGCATAAGAATCTTGTCCGACTGCTGGGTTATTGCATAGAGGGAGTTCATAGGATGCTAGTATATGAATATGTGAACAATGGCAATCTAGAACAGTGGCTACATGGAGCCATGTGCCAGCATGGCACGCTTACTTGGGAGGCTCGCATGAAGGTGCTTCTTGGCACTGCTAAGGCGCTTGCGTATTTACACGAAGCAATTGAGCCAAAAGTTGTTCACAGAGATATAAAATCAAGCAACATTTTGATTGATGACGAGTTCAATGCCAAAGTTTCTGATTTCGGATTGGCCAAACTCTTGGGCTCTGGAGAGAGTCACATCACAACTAGAGTTATGGGAACATTTGGGTATGTGGCACCAGAATATGCAAATACGGGCTTGTTGAATGAAAAGAGTGACATTTATAGCTTTGGTGTTCTCCTGCTAGAAGCAATTACAGGGAGGGACCCTGTGGATTACGCACGTCCTTCTAATGAGGTTAATCTGGTTGAGTGGCTAAAGATGATGGTAGCAACAAGGAGAGCAGAGGAAGTTGTGGACATGAACCTTGAGATCAAGCCAACTACTCGTGCTTTGAAACGTGCCCTTCTTGTTGCACTTAGGTGTATTGATCCTGAATCAATCAAGAGACCCAAGATGAGTCAAGTTGTAAGAATGCTTGAAGCCGACGAATTTCCACTCCACGAGGATAGAAGGAACCGAAAAAGCCGATCGATAAGCTTGGAGATCGAGTCAATGAAAGAAATATCAGGTCCAGAGCAGACGGGTGGGCCGTCCGAGAGCCATAAATCAGAGACAAGCCATGAATAG 1398 44.06 MWILFRKKSKRSVDKFPITQIPNFSKDIRIDQVGIQIPNDHPENRLLSVDVKRNEENSEVMAVTKSSEHDNHSQCSSTYQHEKAGNSQSGEEGSSGNARKQASRSYGGYGGIVPPSPLVGLPEISHLGWGHWFTLRDLELATNRFSTENILGEGGYGVVYKGRLINGTEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMCQHGTLTWEARMKVLLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLGSGESHITTRVMGTFGYVAPEYANTGLLNEKSDIYSFGVLLLEAITGRDPVDYARPSNEVNLVEWLKMMVATRRAEEVVDMNLEIKPTTRALKRALLVALRCIDPESIKRPKMSQVVRMLEADEFPLHEDRRNRKSRSISLEIESMKEISGPEQTGGPSESHKSETSHE 465
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 35080213 35083237 - CrPI670011_02g021490.1 Cre02g2149 491430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre02g2149 465 Gene3D Transferase(Phosphotransferase) domain 1 221 434 - -
Cre02g2149 465 ProSitePatterns Protein kinases ATP-binding region signature. 151 174 IPR017441 GO:0005524(InterPro)
Cre02g2149 465 SMART serkin_6 145 399 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre02g2149 465 ProSiteProfiles Protein kinase domain profile. 145 409 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre02g2149 465 FunFam Putative receptor-like protein kinase 127 220 - -
Cre02g2149 465 MobiDBLite consensus disorder prediction 424 465 - -
Cre02g2149 465 ProSitePatterns Serine/Threonine protein kinases active-site signature. 267 279 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre02g2149 465 PANTHER OS01G0323000 PROTEIN 2 439 IPR052232 -
Cre02g2149 465 Gene3D Phosphorylase Kinase; domain 1 127 220 - -
Cre02g2149 465 SUPERFAMILY Protein kinase-like (PK-like) 129 421 IPR011009 -
Cre02g2149 465 FunFam Putative receptor-like serine/threonine-protein kinase 221 431 - -
Cre02g2149 465 CDD STKc_IRAK 151 417 - -
Cre02g2149 465 MobiDBLite consensus disorder prediction 424 438 - -
Cre02g2149 465 MobiDBLite consensus disorder prediction 67 102 - -
Cre02g2149 465 Pfam Protein kinase domain 146 414 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre02g2149 465 Coils Coil 165 185 - -
Cre02g2149 465 MobiDBLite consensus disorder prediction 58 107 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g1790 Cre-Chr2:31226386 Cre02g2149 Cre-Chr2:35080213 2.60E-141 dispersed
Cre02g2149 Cre-Chr2:35080213 Cre06g1182 Cre-Chr6:5674641 1.00E-145 dispersed
Cre01g0606 Cre-Chr1:5325444 Cre02g2149 Cre-Chr2:35080213 2.60E-53 wgd
Cre01g0234 Cre-Chr1:1727677 Cre02g2149 Cre-Chr2:35080213 1.70E-202 wgd
Cre11g2036 Cre-Chr11:32138040 Cre02g2149 Cre-Chr2:35080213 6.70E-63 wgd
Cre02g2149 Cre-Chr2:35080213 Cre05g2494 Cre-Chr5:36345912 2.50E-75 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63891 PF00069 Pkinase 1.30E-48 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre02g2149 - - - 0.0