Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre02g2165 ATGTTTCTCGCAGGAAAGGTCGAAGAAACCCCTCGCCCGTTGAAGGATGTTATCATGGTCTCATATGAAATCATCAACAAAAAGGATCCTACTGCAGCCCAGAAAATTAGGCAAAAGGAGGTGTATGAACGGCAAAAAGAGTTAATTTTACTTGGGGAGAGAGTTGTTCTCGCAACTCTTGGTTTTGATCTTAATGTGCACCATCCCTACAAACCCCTTGTCGAGGCAATTAAAAAATTCAAAGTTGCTCAAAATGCCTTGGCTCAGGTAGCTTGGAATTTCGTCAATGATGGATTGCGGACATCTCTTTGCTTGCAATTTAAGCCTCACCATATTGCGGCCGGTGCCATTTTCCTTGCTGCCAAATTTCTCAAAGTTAAACTCCCATCAGATGGGGAAAAGGTGTGGTGGCAAGAGTTTGATGTCACCCCACGGCAATTGGAGGAAGTCAGCAATCAAATGTTAGAACTTTATGAACAAAATCGATTGCCGCCTTCTGGCGAAGCTGATGGAAGCATTGGAGGTGGTCCCACTAATCAAACCCCTACAAAAGCTCCTACCAACAGCGAAGAACGTGCCGTAGCAGACAATCATGCACTTGGTGCAGGTGACCAGCCATCAAGAGCAATGCAGAATCATAGTATTGAAAGTTCGAGCGTAGATTTTAGAAGTCCTTCCAATCACAAAACAGGTAGTGAATCTAAGGTTAGACAGGAGATGGAGCCATCGGCTTTCCATGACAAAGGAAACGCTCAAAACTCGGTGAAGCACCAGTCAGAGGGATTGGTTGAGCAAGACCGTGGAAATGATATGAAAATAAATGAAGCAACAACAAGGGATGCAATGGAACTGAAAGACAAACATGTAATTCGAAATATAGATTTTAGAGAAGGTACACTTGGCAAATCTCAGGACGTTATCAAAAAAATTGATAAGGACAAAGTAAAGGCTGCGCTTGAGAAACGAAGGAAGTCTCTTGGCAGCATGACCCAGAAAAAAGAATTGATGGATGAGGATGATCTCATTGAAAGGGAGTTGGAAGCTGGTGTTGAGATGGCTGTTGGCAGTGAGAAAAACAAGCGAGAACAGAGGCAAAGTTGGAATAAGTCATCGAATAAACAAGAATATGAGGATTCATATCAAGACAAACATCGAGAGGACGATAAAGATGAGCATCCTCAACGAACGCGACAGTCATCATATAATCTAGATTCTAGCAACATAGAAGAAGGGGAGTTTGCAAATGCTAATGAAGTAGGTTATGGGTATCAAGATTCCCCAAAGTCGAACAGTCACCAAACCAATGAACAAAAGAGAGTACGGCAATTAATTAATCGATCGCAAGTTATTCCCTTTTGTGGAGAATTTTTCGTTTTTGAGATCGATCGACTCGATCTTGCGCGTAAAATCACCTCCATGGCGATTGCTTCTCGTGTGTCGAATCTTGAAGCTGACATGATAAGGATGAAGCACAAGCTTAAAGAGAAGGAAAAAACCATTTATGACCTACAGGAGAAGTTGTCTCACCTCGAGCACGCGAACCAGGAAGCTGAATCTAGGTTGAAGATTGCGCTTGATGATAATATGAGGCTTTCCAGGGAACGGGATTCACTATCAATGACTTCAAAGAAACTTGGACGTGATTTGGCAAAGCTGGAGACATTTAAAAGACAACTTATGCTATCATTGAGTGATGAATCCTCTCAAACTGAAACTGTTGATATTGGGACCTGTGATCAAGCAGTTCCAAAAACATATACTGACAAGGATGAGGTAACTAATGGACACACCACACGCTCGTTCGGTGGTTCTACAGAAACGAGAAGCACAATAGATGAAGGAAAACATATTGGACAGAGATTTTCATCGCCGTATATCACCCCAAGGCTCACTCCATCTGCAACTCCAAAAATTATTTCAACGAGTGTATCCCCCAGAGGGTATTCCACCGTTGCTTCTCCACAAATAACGTCTGGTTCAACTTCTCCAACAAAACCCTCATATGATGGACGGATTGCACTATCTCCATGGTACCCATCAAGCCAGCAGTCTTCAGCAGCAAGTTCTCCTCCTCGTTCTCGTCAACTGGCTGGTCGCCCTGCTCGAGTGGATGGCAAGGAATTTTTCCGCTTAGCCAGGAGTCGCCTGCAATACGAGCAGTTTAGTGCCTTCCTTTCGAACATAAAGGAACTCAATGCTCAAAAGCAGACCAGAGAGGAAACTTTAAGAAAAGCAGAAGAGATATTTGGGACAGATAACAAAGATCTTTTTCTGTCATTTCAAGGGTTGCTTAACCGCAATACTCACTATGTTTTTGTAAAGTATAAAAGATCAAACCCTGTTGGAGTTGAAACTTCTTTTTTCTGTAGAAACAATGAGTTTGGTTTTTTGAAGATTGTAGCATCTAAAGCTGCAGCCAGTCTCTGTGACAACTCTATTTGGGGAAAGTATTACTTTCAGTCCATGTTTCTCATTTTACCTTCACATTCGAAGAATTCAAAGTCTGTGCTGGCAAGTTTTCATTTAAAGAAGGGAAGTCAGGGCTGGCTTGCAAGAGAACCAGAAAAGTTATCATCATATGCTCCAAAATCAGCGTACGTTCACTTGCAAGCTATCTGCTCCATCACAACGCCAACTTGTCTAGTCAGGCAAAACACAGAGGCTGACGGAAAGATAAGATTTTGGTCAAAAGAATCTGCAAAAATGGCTGTCACTAGTTTTGATAAGATTGAGATCTACACTTTGAACTGGAAAGATTCTTGCAATAGTACTTGTTGGTACACCTTTAATGTTTGGGATAAGCAAGGATTGAAATATTCGTGA 2823 42.08 MFLAGKVEETPRPLKDVIMVSYEIINKKDPTAAQKIRQKEVYERQKELILLGERVVLATLGFDLNVHHPYKPLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKVWWQEFDVTPRQLEEVSNQMLELYEQNRLPPSGEADGSIGGGPTNQTPTKAPTNSEERAVADNHALGAGDQPSRAMQNHSIESSSVDFRSPSNHKTGSESKVRQEMEPSAFHDKGNAQNSVKHQSEGLVEQDRGNDMKINEATTRDAMELKDKHVIRNIDFREGTLGKSQDVIKKIDKDKVKAALEKRRKSLGSMTQKKELMDEDDLIERELEAGVEMAVGSEKNKREQRQSWNKSSNKQEYEDSYQDKHREDDKDEHPQRTRQSSYNLDSSNIEEGEFANANEVGYGYQDSPKSNSHQTNEQKRVRQLINRSQVIPFCGEFFVFEIDRLDLARKITSMAIASRVSNLEADMIRMKHKLKEKEKTIYDLQEKLSHLEHANQEAESRLKIALDDNMRLSRERDSLSMTSKKLGRDLAKLETFKRQLMLSLSDESSQTETVDIGTCDQAVPKTYTDKDEVTNGHTTRSFGGSTETRSTIDEGKHIGQRFSSPYITPRLTPSATPKIISTSVSPRGYSTVASPQITSGSTSPTKPSYDGRIALSPWYPSSQQSSAASSPPRSRQLAGRPARVDGKEFFRLARSRLQYEQFSAFLSNIKELNAQKQTREETLRKAEEIFGTDNKDLFLSFQGLLNRNTHYVFVKYKRSNPVGVETSFFCRNNEFGFLKIVASKAAASLCDNSIWGKYYFQSMFLILPSHSKNSKSVLASFHLKKGSQGWLAREPEKLSSYAPKSAYVHLQAICSITTPTCLVRQNTEADGKIRFWSKESAKMAVTSFDKIEIYTLNWKDSCNSTCWYTFNVWDKQGLKYS 940
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 35256927 35266854 - CrPI670011_02g021650.1 Cre02g2165 491446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre02g2165 940 SMART cyclin_7 71 156 IPR013763 -
Cre02g2165 940 MobiDBLite consensus disorder prediction 173 190 - -
Cre02g2165 940 FunFam Cyclin-T1-5 like 66 170 - -
Cre02g2165 940 Gene3D - 1 64 - -
Cre02g2165 940 CDD CYCLIN_AcCycT_rpt2 67 159 - -
Cre02g2165 940 MobiDBLite consensus disorder prediction 353 409 - -
Cre02g2165 940 MobiDBLite consensus disorder prediction 624 668 - -
Cre02g2165 940 SUPERFAMILY Cyclin-like 1 66 IPR036915 -
Cre02g2165 940 SUPERFAMILY Cyclin-like 67 163 IPR036915 -
Cre02g2165 940 MobiDBLite consensus disorder prediction 207 227 - -
Cre02g2165 940 MobiDBLite consensus disorder prediction 588 700 - -
Cre02g2165 940 MobiDBLite consensus disorder prediction 162 240 - -
Cre02g2165 940 Coils Coil 728 748 - -
Cre02g2165 940 Gene3D - 66 166 - -
Cre02g2165 940 MobiDBLite consensus disorder prediction 419 438 - -
Cre02g2165 940 MobiDBLite consensus disorder prediction 353 368 - -
Cre02g2165 940 MobiDBLite consensus disorder prediction 375 397 - -
Cre02g2165 940 MobiDBLite consensus disorder prediction 422 438 - -
Cre02g2165 940 MobiDBLite consensus disorder prediction 676 692 - -
Cre02g2165 940 Pfam Cyclin-T2-like, C-terminal domain 69 156 - -
Cre02g2165 940 Coils Coil 479 534 - -
Cre02g2165 940 PANTHER OS03G0659800 PROTEIN 462 769 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g2165 Cre-Chr2:35256927 Cre09g1638 Cre-Chr9:33768744 5.40E-114 dispersed
Cre02g2165 Cre-Chr2:35256927 Cre06g1317 Cre-Chr6:7112896 6.80E-40 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre02g2165 K15188 - csv:101220862 793.497