Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre02g2168 ATGCCTATGGCTACTGCACCCTTGAACAAAATTGAGCGAGCCCATCAGATGTACCGTGAAGGGCTTTATGTCGAAGCCCTGAGATTTTACACTGAAGCTCTTGCCATGGCCAAAACCAAGTCCCAGAGGATTGCGCTTCATAGTAACAGAGCTGCTTGCCATTTGAAACTTCATGATTTCAAGAAGGCAGCGGAAGAATGTACATGGGTTCTTGAACTTGATCACAAGCACACTGGAGCTCTAATGCTTCGTGCCCAGACTCTTGTCACACTCAAGGAATACCATTCTGCTCTCTTTGATGTTAACAGACTTATAGAATTGAACCCATCATCAGAAGTTTATCAGAATCTTCACACTCGACTCAAGACGCAATTGTCGCTTGCTCCAATACCTGAATCAGAAGTAGAGCTTGAAGAAGAGGAGGAAGAAGAAGAATGCGCTGTCGAGTTCAGTGCATATGCTGCCAATGAGAAGTGCAATGAGGGAAAAGAAAATGTTGTCGCTCCGAGTATTGCACAGGTACAGAAACCTGAGCATAATTGCAATTTGATTGAAAAGAACATTATCCAGACTACTCAGGGCAACTGTGGATTATCTGAAGAAGAAAGGGGCAATCAGAAAGTTGAGGTGAAAATGAATACTAAAACTGAAGTTGTTACTCCTCAAGCCCAAAGCAAGAAGGGCACAACTGACCTAGGTCCCAATGGCTGGCAAACAATCCCAAAACCAAAAGGTCACTCAGCTTTAGACTATGCACGTTGGGATAGAGTTGAGGATGATTCTAGTGAAGATGATGATGACGATGAAGAAGAAGACTCAGGACCTCAATTCCGTTTTCGTGTTAGAACTAAAAATGACACAACGAGCAACTCCGAGCCTCGTGTATTTTGGAAATTCATATGTAAAAAATCAGTACTGTTGAGACCTTCAGACCTATGTAAAGTGTATTTGGTTACATTCAAAACTAGCACTGTGGATCTGATCGACGAGCAAGCTTTGCACATAAGACTTTATACAGAGCTCCAGCTGATGCTGTTTGGTTTGAGTAATCTGTCTGCTGCACAATATCAATTTCCGGGTGGTTATCACAAATGGAGATCCTGTCTTGGATTATGGATAATAGTTCTGGAATTGGCTAAAGGTTGCTGCTACGCAAGCAAAAGAAATCTTCCTTCTTCTGGTGAAGAAGCAACTGATGAAATGAATGGTATTCTTAATCGCATCATTACGCCCTACTTCTGTAACTTCGATTACTTGCCCATCAATCTCGATATGCATATGGAGAATTTATCATCTAGTGATCCATCACATCAAGCGATGTATGAAAATAGTGATTCAAAGCACTCACAGGATGGGTTGGAGGATGGCTCTCGATGGTATTTTTCTAGGAAGGAATTAGAAGAATTCTCACCTTCTAAACAAGATGGGATTGACTTGAAGAAGGAGACATATTTACGCAAATCATACTGTACATTTCTCCAAGATTTGGGAATGAGACTTAAAGTTCCCCAGGTAACCATTGCTACAGCTATAATTTTTTGCCATAGGTTCTTTCTACGGCAGTCTCATGCAAAGAATGACCGAAGGGTAAAAGATTCTTCTTCTTCTTCTTCTTCTTCTAGGGAAGACACTAGCCAAGTCACCTTTTGGGACCTTGTTAGAATTCTTACTTACTCTACATCTAAGACTTTTGGTGAACAGGCGACACAACTGACAGAAAACAACGTCGGCACCTCAAACATTTGGCGAACTGTTGCTGATGAGCGGTGGTGGAAAACCTTGTATCTAGTTGCACATAAGCCACTTTGA 1809 41.74 MPMATAPLNKIERAHQMYREGLYVEALRFYTEALAMAKTKSQRIALHSNRAACHLKLHDFKKAAEECTWVLELDHKHTGALMLRAQTLVTLKEYHSALFDVNRLIELNPSSEVYQNLHTRLKTQLSLAPIPESEVELEEEEEEEECAVEFSAYAANEKCNEGKENVVAPSIAQVQKPEHNCNLIEKNIIQTTQGNCGLSEEERGNQKVEVKMNTKTEVVTPQAQSKKGTTDLGPNGWQTIPKPKGHSALDYARWDRVEDDSSEDDDDDEEEDSGPQFRFRVRTKNDTTSNSEPRVFWKFICKKSVLLRPSDLCKVYLVTFKTSTVDLIDEQALHIRLYTELQLMLFGLSNLSAAQYQFPGGYHKWRSCLGLWIIVLELAKGCCYASKRNLPSSGEEATDEMNGILNRIITPYFCNFDYLPINLDMHMENLSSSDPSHQAMYENSDSKHSQDGLEDGSRWYFSRKELEEFSPSKQDGIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLRQSHAKNDRRVKDSSSSSSSSREDTSQVTFWDLVRILTYSTSKTFGEQATQLTENNVGTSNIWRTVADERWWKTLYLVAHKPL 602
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 35273604 35285290 - CrPI670011_02g021680.1 Cre02g2168 491449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre02g2168 602 SUPERFAMILY Cyclin-like 456 529 IPR036915 -
Cre02g2168 602 SMART tpr_5 44 77 IPR019734 GO:0005515(InterPro)
Cre02g2168 602 SMART tpr_5 78 111 IPR019734 GO:0005515(InterPro)
Cre02g2168 602 SMART tpr_5 7 40 IPR019734 GO:0005515(InterPro)
Cre02g2168 602 Gene3D - 448 539 - -
Cre02g2168 602 MobiDBLite consensus disorder prediction 434 454 - -
Cre02g2168 602 Gene3D Tetratricopeptide repeat domain 9 150 IPR011990 GO:0005515(InterPro)
Cre02g2168 602 MobiDBLite consensus disorder prediction 211 236 - -
Cre02g2168 602 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 3 283 - -
Cre02g2168 602 MobiDBLite consensus disorder prediction 198 290 - -
Cre02g2168 602 SUPERFAMILY TPR-like 11 120 IPR011990 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g2168 Cre-Chr2:35273604 Cre09g1638 Cre-Chr9:33768744 4.50E-37 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre02g2168 - - - 0.0