Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre02g2182 ATGAGTTCGAACACCGCGTCTAGCTCCGGAGGTCCGGGATCGAACGATTCATCATCCAATAGAAGGAATTCGAAGCGACCTAAATATTCGAGGTTTACCCAGCAGGAACTTCCAGCGTGTAAACCCATTCTCACACCAAGATGGGTGATTTCTGCATTCATGTTAGTTAGCATTATCTTTGTTCCCATTGGAGTTGCTTCCTTGTTTGCTTCCAGAGATGTCGTTGAAATAATTGATCGTTATGAAACTGAGTGCATACCAGAACAATTTAGAAACGATAAGGTTGGGTTCATACAGGGCCCTGCAGTTAAAACTTGCCGCAGAAACATAACTGTGCCGAAACGTATGAAACAACCAATATATGTTTATTACCAGCTTGACAATTTCTACCAGAACCACCGCAGATACGTGCAGAGCCGTAGTGATAAGCAATTGAGGGATGCTGGCAGCGCGCATGATACAAGCTCTTGCAAGCCTGAAGACAATGTGAATGGGCAGCCAATCGTTCCCTGTGGTTTGATAGCATGGAGTTTGTTTAATGATACTTATAACTTCACCCTTAACAAGAAGCAAGTCGATGTGAATAAGGTCGGTATTTCATGGAAGAGTGACCGGGAACATAAATTCGGCAAGAATGTATTTCCCAAGAACTTTCAAAATGGTACACTGAAAGGAGGCAAAACCCTTGATGCAGACAAACCATTGAGTCAACAGGAGGACCTTATTGTGTGGATGCGAACTGCTGCTCTTCCCACATTCAGAAAGTTATATGGAAAGATAGAGGTCGACCTTGAGAAAAATGATGTAATAGATGTGGTTTTGGAGAACAATTATAACACTTACAGTTTTAACGGCAAGAAAAAGCTTGTGCTTTCTACAACTAGCTGGCTTGGTGGGAAGAATGATTTTCTTGGAATTGCTTATCTTACTGTTGGTGGGTTATGCTTCTTTTTGGCAATGGCTTTCACAGTCGTCTATCTTGTTAAGCCAAGGCGACTTGGGGACCCGTCATATCTGTCATGGAATAGAAACCCAGGTGGGCACTGA 1047 42.88 MSSNTASSSGGPGSNDSSSNRRNSKRPKYSRFTQQELPACKPILTPRWVISAFMLVSIIFVPIGVASLFASRDVVEIIDRYETECIPEQFRNDKVGFIQGPAVKTCRRNITVPKRMKQPIYVYYQLDNFYQNHRRYVQSRSDKQLRDAGSAHDTSSCKPEDNVNGQPIVPCGLIAWSLFNDTYNFTLNKKQVDVNKVGISWKSDREHKFGKNVFPKNFQNGTLKGGKTLDADKPLSQQEDLIVWMRTAALPTFRKLYGKIEVDLEKNDVIDVVLENNYNTYSFNGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLAMAFTVVYLVKPRRLGDPSYLSWNRNPGGH 348
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 35457488 35460110 - CrPI670011_02g021820.1 Cre02g2182 491463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre02g2182 348 PIRSF Lem3/Cdc50 1 344 IPR005045 GO:0016020(InterPro)
Cre02g2182 348 MobiDBLite consensus disorder prediction 1 31 - -
Cre02g2182 348 MobiDBLite consensus disorder prediction 141 161 - -
Cre02g2182 348 PANTHER CELL CYCLE CONTROL PROTEIN 50 17 340 IPR005045 GO:0005783(PANTHER)|GO:0005794(PANTHER)|GO:0005886(PANTHER)|GO:0016020(InterPro)
Cre02g2182 348 MobiDBLite consensus disorder prediction 1 20 - -
Cre02g2182 348 Pfam LEM3 (ligand-effect modulator 3) family / CDC50 family 68 332 IPR005045 GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre05g1228 Cre-Chr5:12020541 Cre02g2182 Cre-Chr2:35457488 1.30E-126 transposed
Cre02g2182 Cre-Chr2:35457488 Cre04g2085 Cre-Chr4:38049174 5.70E-109 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre02g2182 K26935 - csv:101216400 639.032