Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre02g2188 ATGCCCCTTAAAAAGGTCACCGCAGCCTTGAGAAGAGAAGGATTAGAATCGTCGAACCTCATCGTCGGAATTGATTTCACCAAAAGCAACGAGTGGACAGATATGTCGAATCAAATCAATCGCACTGCTCTGTCGATCATCGGGAAAACTCTGGCTCCCTTCGACGAAGACGGCTTAATTCCTTGCTTCGGTGTCGGCGACGCGACGACGCACGATCAAATGGTGTTCAGTTTTCACAATGATAATTCCCCGTGCCATGGATTTGAAGAAGTTCTTGATTGCTACAAGAAGATAATTCCGAATGTGCAACTTTCAGGGCCAACTTCTTACGGTCCTGTGGTTGAAGCTGCAATGGATATTGTGGAGAAGAGTGGTGGACAATTTCATATTCTGCTCATTGTTGCAGATGGACAAGTTACTCGAAGCTCCAATATTGGCGATGGTGAATTGAGCGTTCAAGAGGAGAAAACAATCAAAGCAATTCTCGATGCGAGTGCATATCCTCTTTCGATTATTCTTGTTGGAGTTGGAGATGGTCCTTGGGACGACATGAAGAAGTTCGACGACAAGGTCCCAGCTCGGGATTTCGATAATTTTCAGTTTGTTAACTTCACTGAAACAATGTCGAAAAGCCACGGCACGCCTGAAAAAGAAGCAGCTTTTGCTTTAGCTGCACTTATGGAGGTTCCTTTCCAGTACAAAACAGAAAAACAAAACGCATTGTGCCACGACCCCCTCCAACACGTTATACTCGTCCTACATGGCTCACTCCCATACCTAGCAACACCTCCTCATCCAACACGTTATACTCGTCCTACATGGCTCACTCCCATACCTAGCAACACCTCCTCAGCTTCTGCATCTGATGAACAGAATCAGTATGGAACTTGTCACTTCCTTTGCTTGATTATTGCTCTTTATAATTCTGGGGTTTCAATATTGGTTCCAAATTTGGGATGGATCAAGTATAGAAACAACAACATTATTTCCAACTCAAATGCAGCCTATCAGAAACCGAATAAGGCTATATACTGGGTGATCGGATTGCACCAAGGGGATAGTGAGATGAGGTCGATGATAATCAGACGAATATGA 1095 44.29 MPLKKVTAALRREGLESSNLIVGIDFTKSNEWTDMSNQINRTALSIIGKTLAPFDEDGLIPCFGVGDATTHDQMVFSFHNDNSPCHGFEEVLDCYKKIIPNVQLSGPTSYGPVVEAAMDIVEKSGGQFHILLIVADGQVTRSSNIGDGELSVQEEKTIKAILDASAYPLSIILVGVGDGPWDDMKKFDDKVPARDFDNFQFVNFTETMSKSHGTPEKEAAFALAALMEVPFQYKTEKQNALCHDPLQHVILVLHGSLPYLATPPHPTRYTRPTWLTPIPSNTSSASASDEQNQYGTCHFLCLIIALYNSGVSILVPNLGWIKYRNNNIISNSNAAYQKPNKAIYWVIGLHQGDSEMRSMIIRRI 364
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 35527708 35531981 - CrPI670011_02g021880.1 Cre02g2188 491469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre02g2188 364 Pfam Copine 41 239 IPR010734 -
Cre02g2188 364 SUPERFAMILY vWA-like 19 187 IPR036465 -
Cre02g2188 364 PANTHER COPINE FAMILY PROTEIN 1 3 242 IPR052079 GO:0004842(PANTHER)|GO:0005634(PANTHER)|GO:0016567(PANTHER)
Cre02g2188 364 SMART VWA_4 17 207 IPR002035 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g2188 Cre-Chr2:35527708 Cre04g1734 Cre-Chr4:35446751 5.60E-83 dispersed
Cre02g2188 Cre-Chr2:35527708 Cre05g2769 Cre-Chr5:38475260 1.00E-84 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre02g2188 K16280 - csv:101218058 431.409