Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre02g2190 ATGCTGAATCTTCCGTTTAGCTCGAGGGTTATGAGGTTAATGGCAATGCCTACTTCTTTTGCTCTCTTCTTCCTCCTTCATCTTCATTTCGTAATATCGACTTTCGATATTCAACCAGTCATTACAGTTACCTCAAAAAGTCGCACACCTCCTCCAGCAGCTGCTCTTTTGTCGCATAACTTTTATCAACGAACATGCCCAGATGCGGAAGGCATCATTCACCGAAAAGTACTAGCTTGGATCCAAAAAGATTTTACGTTGGCCCCAGCCCTCATTCGCTTGCATTTCCATGATTGTGCTGTTAGGGGATGTGATGCATCGATTCTACTGAACTATCGAAGTAGCGAGAGAAGCGCCTACCCCAGCAGAACCCTAAGAGGATTCCAAGTGATCGACGATATCAAGGCCGAGCTCGAGAGAAAATGCCCTAAAACCGTCTCCTGCTCCGACATTCTCACCGCCGCCGCCAGAGACGCCACCATTCTCGCCGGAGGTCCCTTCTGGGAGGTTCCATTTGGCCGTAAAGACGGCAGAATCACCATCGCCGCCGAAGCAGAGCGAGTCCCTCAGGGCCACGAAAACGTCACCGCTTTGATCGACTACTTCCGACACCTAGGGCTCGACGTCCTCGATCTAGTCGCCCTCTCCGGCGCCCACACCATCGGCCGAGCCGCCTGCCATAGCTTCCATGATAGGCTCTACAATTTCAACCGGACCGGAAAAGCCGACCCGAATCTGAAACCTCCATTTCTGAATATGCTACGAAAGCATTGCAAGAACGATATGGATCTCGTTTTTCTGGATGCGACGACTCCGAAAATGTTCGATACTGCTTATTTCACGAACCTTCAGAAGAAATTAGGGCTTCTTGTGACGGATCAAGCGCTGTTTTCGGATGAGAGAACTTCTTCGTTTGTGGATTTGATGGCGAATCAGCCGTTTCTTTTCGATAGCCAATTTTCGGCGTCGATGGTGAAATTGGGAAATGTGGGAGTGCTCACCAGGAAAAATGAGGGAGAAATTCGAGTCAATTGCAATTTCGTCAATCCCAGTAGAAGGAAGTAA 1065 49.11 MLNLPFSSRVMRLMAMPTSFALFFLLHLHFVISTFDIQPVITVTSKSRTPPPAAALLSHNFYQRTCPDAEGIIHRKVLAWIQKDFTLAPALIRLHFHDCAVRGCDASILLNYRSSERSAYPSRTLRGFQVIDDIKAELERKCPKTVSCSDILTAAARDATILAGGPFWEVPFGRKDGRITIAAEAERVPQGHENVTALIDYFRHLGLDVLDLVALSGAHTIGRAACHSFHDRLYNFNRTGKADPNLKPPFLNMLRKHCKNDMDLVFLDATTPKMFDTAYFTNLQKKLGLLVTDQALFSDERTSSFVDLMANQPFLFDSQFSASMVKLGNVGVLTRKNEGEIRVNCNFVNPSRRK 354
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 35573423 35575425 - CrPI670011_02g021900.1 Cre02g2190 491471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre02g2190 354 PRINTS Plant peroxidase signature 322 335 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2190 354 PRINTS Plant peroxidase signature 282 299 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2190 354 PRINTS Plant peroxidase signature 164 179 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2190 354 PRINTS Plant peroxidase signature 90 110 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2190 354 PRINTS Plant peroxidase signature 266 281 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2190 354 PRINTS Plant peroxidase signature 66 85 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2190 354 PRINTS Plant peroxidase signature 210 222 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2190 354 PRINTS Plant peroxidase signature 126 139 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2190 354 PRINTS Plant peroxidase signature 145 155 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2190 354 SUPERFAMILY Heme-dependent peroxidases 57 350 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2190 354 ProSitePatterns Peroxidases active site signature. 88 99 IPR019794 GO:0004601(InterPro)
Cre02g2190 354 ProSitePatterns Peroxidases proximal heme-ligand signature. 211 221 IPR019793 -
Cre02g2190 354 Gene3D Peroxidase, domain 2 189 327 - -
Cre02g2190 354 Pfam Peroxidase 75 311 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2190 354 PANTHER PEROXIDASE 25-RELATED 54 345 IPR000823 GO:0004601(PANTHER)|GO:0004601(InterPro)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
Cre02g2190 354 FunFam Peroxidase 189 327 - -
Cre02g2190 354 PRINTS Haem peroxidase superfamily signature 88 102 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2190 354 PRINTS Haem peroxidase superfamily signature 268 283 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2190 354 PRINTS Haem peroxidase superfamily signature 211 226 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2190 354 PRINTS Haem peroxidase superfamily signature 146 163 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2190 354 PRINTS Haem peroxidase superfamily signature 164 176 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2190 354 Gene3D - 60 349 - -
Cre02g2190 354 ProSiteProfiles Plant heme peroxidase family profile. 56 349 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2190 354 CDD secretory_peroxidase 57 348 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cre02g2190 354 FunFam Peroxidase 60 199 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g2190 Cre-Chr2:35573423 Cre04g1291 Cre-Chr4:31693565 1.30E-71 dispersed
Cre03g0701 Cre-Chr3:5904930 Cre02g2190 Cre-Chr2:35573423 2.00E-103 transposed
Cre02g2190 Cre-Chr2:35573423 Cre05g2501 Cre-Chr5:36431809 5.50E-59 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre02g2190 K00430 - csv:101204209 593.964