Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre02g2192 ATGTTAGGTTACAGGAAGCCAATGTCGCCTATTTCACATTTTTGTTTCTTCTTCCTCTTCTTCTTCCTCTCTGTTCACAACGCATTGGGCGGCCATGACCAAGAAACTGTAAAACTCGATCTACTTCACCGTCACCATCCACAAGTCGCCGAGAAGCTTCACGGCAATATGAAAGTTGAAGATCTCAACGATCGGATCAAGGATATTCACGATCACGACCTCAAACGATATCAAACCATCTCCACATCGTTGAACCGGAAGCAAATTGAGGAGAAATTGAAGGCGGAAGCGGAGGTTGAGACAGCGAAGGATCCGATACTTCCACCGACGTCGCCTACGCCGATAGGGCTGAAAATGATATCAGGTTCAGATTATGGAAGTAGTGAGTATTTTGTTCAATTGAAAGTGGGAACACCGCCTCAGACGTTCATGTTGATCGTGGATACCGGAAGCGATCTAACGTGGATAAAATGTAGATATCGGAGGTGTATCGGAAATTGTAGCAGCAAGGCGAGTCATAAGAGCCGAAACGAACGGAAAACGAGATTTAGAAATGCGTTTTTGGCGAATTATTCGTCGTCTTTCAAGACCATTCATTGCAGCTCCACGACGTGTACCACTGACCTCGCGGATCTGTTCTCAATTGGGGAATGCAAAACCCCAAGTAGCCCTTGTATCTATGATTACAGCTACGCAGGAGGAGCAAGTGCAAAGGGAATATTCGCAATCGAGACCCTAACCGTAGACCTAACAAACGGAAAAGAAAAACAACTCCACAATTCTATAATCGGCTGCACCGAATCAGTCCAAGGAAGGATATTCGGCGGAGCCGACGGCGTCATTGGCTTAGGCACTAGCCCCTACTCTTTTACCTACAAAGCCGCCGAAAACGCCAACGGCGGCGGCTTCTCCTACTGCCTTGTCGACCATCTCAGCCACCACACTGCCACCAGCTACTTCATCCTCGGCGCCCCTTCCCCCTCCGCTTCCGCTGCTGCCTCCTCCGTCGTCCCTTCTGGCAACATGACCTTCACCAAACTCTTCGTCGGCGACCCTTACAACAGCTTCTACGGCGTCGATCTCATCGGAATCTCCGCCGACGGCGTCATGCTCAACATTCCTCCCCGCGTTTGGGACATCAATTCCGGCGGCGGTACCATCCTCGACTCCGGAACTAGCCTCACCATGCTGGCGGCGCCGGCGTTCGATATGGTCATGGAAGCTCTGACTCCTAAGCTGAAGCATTTCGAGCAAATTGAAGTCGAACCCTTCGAATTTTGCTTCAATAATAGCCAGTACACCCATGAAATGGCCCCGAAGATCCGATTCCATTTCGGCGACGGCACGATGTTCCAGCCGCCGGTGAAAAGCTACGTTGTGTCGGCGGGTGAATATATTAGCTGTATTGGGTTCATTTCTATGCCTTTTCCGGCCTATAATATCATCGGGAATATTCTTCAGCAAAATCACCTTTGGCAATTTGATTTCTTTAGGAGAAAAGTCGGTTTTGCCCCCTCTGAATGCGTCTAA 1530 49.48 MLGYRKPMSPISHFCFFFLFFFLSVHNALGGHDQETVKLDLLHRHHPQVAEKLHGNMKVEDLNDRIKDIHDHDLKRYQTISTSLNRKQIEEKLKAEAEVETAKDPILPPTSPTPIGLKMISGSDYGSSEYFVQLKVGTPPQTFMLIVDTGSDLTWIKCRYRRCIGNCSSKASHKSRNERKTRFRNAFLANYSSSFKTIHCSSTTCTTDLADLFSIGECKTPSSPCIYDYSYAGGASAKGIFAIETLTVDLTNGKEKQLHNSIIGCTESVQGRIFGGADGVIGLGTSPYSFTYKAAENANGGGFSYCLVDHLSHHTATSYFILGAPSPSASAAASSVVPSGNMTFTKLFVGDPYNSFYGVDLIGISADGVMLNIPPRVWDINSGGGTILDSGTSLTMLAAPAFDMVMEALTPKLKHFEQIEVEPFEFCFNNSQYTHEMAPKIRFHFGDGTMFQPPVKSYVVSAGEYISCIGFISMPFPAYNIIGNILQQNHLWQFDFFRRKVGFAPSECV 509
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 35595933 35597667 - CrPI670011_02g021920.1 Cre02g2192 491473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre02g2192 509 Pfam Xylanase inhibitor C-terminal 357 504 IPR032799 -
Cre02g2192 509 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 145 156 IPR001969 GO:0004190(InterPro)|GO:0006508(InterPro)
Cre02g2192 509 FunFam Aspartyl protease family protein 339 509 - -
Cre02g2192 509 CDD pepsin_A_like_plant 129 508 IPR034161 -
Cre02g2192 509 PRINTS Pepsin (A1) aspartic protease family signature 136 156 IPR001461 GO:0004190(InterPro)|GO:0006508(InterPro)
Cre02g2192 509 PRINTS Pepsin (A1) aspartic protease family signature 480 495 IPR001461 GO:0004190(InterPro)|GO:0006508(InterPro)
Cre02g2192 509 PRINTS Pepsin (A1) aspartic protease family signature 386 397 IPR001461 GO:0004190(InterPro)|GO:0006508(InterPro)
Cre02g2192 509 Pfam Xylanase inhibitor N-terminal 130 323 IPR032861 -
Cre02g2192 509 SUPERFAMILY Acid proteases 122 508 IPR021109 -
Cre02g2192 509 Gene3D Acid Proteases 115 323 IPR021109 -
Cre02g2192 509 PANTHER OS07G0603500 PROTEIN-RELATED 25 505 IPR051708 -
Cre02g2192 509 Gene3D Acid Proteases 330 509 IPR021109 -
Cre02g2192 509 ProSiteProfiles Peptidase family A1 domain profile. 130 504 IPR033121 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g2192 Cre-Chr2:35595933 Cre11g2058 Cre-Chr11:32354963 2.80E-48 dispersed
Cre02g2192 Cre-Chr2:35595933 Cre09g1961 Cre-Chr9:38523432 2.40E-55 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre02g2192 - - - 0.0