Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre02g2214 | ATGTTAAAGAATACTCGAGCTAGGAATCCCAGCAGCAACCTCCGTGATAGCAACTCGGAATTTGGGTATGTTGAGACCGATCCGACATGTCGTTACGGCCGGTTTGACGAAGTCTTGGGAAAAGGGGCCATGAAGACAGTGTACAAAGCCATTGATGAGTTTCTTGGAATAGAGGTGGCGTGGAGTCAGGTGAAACTCAATGAGGTCCTCCGATCGCCCGAGGATTTGCAGCGGCTGTATTCAGAGGTTCATCTACTTAGCACACTTAAGCATGAATCGATCATGCGATTCTACACCTCTTGGATCGACGTTGATCGCAAAACCTTCAACTTCATTACTGAACTGTTTACTTCTGGAACGCTCAGAGAATACGGAAAGAAGTATAGGCGAATCGATATCAGAGCCATTAAGAGCTGGGCATGCCAGATTCTGCAGGGGCTCATTTATTTGCACGAACACGATCCCCCGATAATACACAGAGATCTGAAGTGTGATAATATCTTTGTGAATGGCCATCTTGGGCAAGTCAAGATTGGTGACTTGGGGCTTGCAGCTATACTTCATGGTTCCAGATCTGCCCACAGTGTTATAGGCACACCGGAGTTTATGGCGCCGGAACTATACGAGGAGAATTACAACGAACTAGTTGATGTCTACTCGTTTGGCATGTGTGTTCTAGAGATGCTTACTTCTGAGTACCCATATAGCGAGTGTTCTAATCCTGCACAGATTTACAAGAAAGTCACGTCGGGAAAGCTGCCAGCAGCATTGTACAAGATTCAAGATATGGATGCGCAGAGATTTGTTAAGAAATGCTTGTTACCGGTTTCGATGAGGGCGTCTGCAAAGGAACTCTTGTCCGATCATTTTCTCAAAGTTGATGGAGATAAACCTTCTTCGAAGGAGAGGACTCCAAACCAGAAGCCATTTCTAAATGCCAAAGAGATGGAGAAATTGCACTTGGGTGAAGGTTTAAGCAGGACCAACATGACGATCACGGGGAAGCTGAACCCCGAAGACAATACCCTCTTTCTCAGAGTTCAGATTGCCGATAAAGAAGGCTCTCTTAGGAACATATACTTCCCCTTCGACATAGTTAACGACACAGCATTAGATGTGGCAATGGAGATGGTGAAAGAGTTGGAGATATCTGATTGGGAGCCGTTCGAAATAGCGGACATGATTGAAGGAGAGATATCGGCTCTAGTTCCGAACTGGAATAGAAGTGAGTTATCCAACCATAACCTCAGCTTTAGCTATGCAGAAGAAGATGATAATGCATCTCATCATACTTTCCGCTCAGTCTCCTCGTCGTCCCAAGCAACAACTTTGGGTCTCATCACCTCCCCTAGAACAAACCAAAACATATCAAATGGTTTTAGTTGGTTCCCAGACGATGTGCTTGATGATAGCAGTTCACAGTGCTCATCGGCGTCGGAAAAATATTCCAACTTGAATTACATCAGCAGCGACGAGAACGAGACCAGTATGAGTTCGGTCCAGATAGATCAACATACCAACATCAATAAGATTCACAATTCCTCAAGATTTTGTCCTGTTGAGAACCGGAAGAACAAGGATTTCTTGGGCGGACTTCTATACAAGCAGAGCCAATGTGCGATAGCAGGGTTGTCTCAAGGAGTTGCCTCGAGGGGAAGGGATGGTTGTAAATTAACAAGGAACAGATCACTAGTAGATGTACATAGCCAATTGCTGCATCGTTCGTTGGTGGAGGAGGTGAATAGAAGACGATTATTCAAGACGGTTGGAGCAGTGGAAAGCATCGGATTTCAAGCACCTTGTGAGGTTTCTTCCAGCAAAAGAGGCTCGAGTAGGCAACCGATCGGGAACCGAAGTAGCGATGTAGTGAGAACGAGGAGAAACAGCGATATTAGGTGGCAAGATGTTGGAAGGAGAACATGA | 1923 | 45.5 | MLKNTRARNPSSNLRDSNSEFGYVETDPTCRYGRFDEVLGKGAMKTVYKAIDEFLGIEVAWSQVKLNEVLRSPEDLQRLYSEVHLLSTLKHESIMRFYTSWIDVDRKTFNFITELFTSGTLREYGKKYRRIDIRAIKSWACQILQGLIYLHEHDPPIIHRDLKCDNIFVNGHLGQVKIGDLGLAAILHGSRSAHSVIGTPEFMAPELYEENYNELVDVYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPAALYKIQDMDAQRFVKKCLLPVSMRASAKELLSDHFLKVDGDKPSSKERTPNQKPFLNAKEMEKLHLGEGLSRTNMTITGKLNPEDNTLFLRVQIADKEGSLRNIYFPFDIVNDTALDVAMEMVKELEISDWEPFEIADMIEGEISALVPNWNRSELSNHNLSFSYAEEDDNASHHTFRSVSSSSQATTLGLITSPRTNQNISNGFSWFPDDVLDDSSSQCSSASEKYSNLNYISSDENETSMSSVQIDQHTNINKIHNSSRFCPVENRKNKDFLGGLLYKQSQCAIAGLSQGVASRGRDGCKLTRNRSLVDVHSQLLHRSLVEEVNRRRLFKTVGAVESIGFQAPCEVSSSKRGSSRQPIGNRSSDVVRTRRNSDIRWQDVGRRT | 640 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 35826417 | 35829699 | + | CrPI670011_02g022140.1 | Cre02g2214 | 491495 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre02g2214 | 640 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 157 | 169 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cre02g2214 | 640 | Gene3D | Transferase(Phosphotransferase) domain 1 | 116 | 296 | - | - | |
Cre02g2214 | 640 | Gene3D | Phosphorylase Kinase; domain 1 | 17 | 114 | - | - | |
Cre02g2214 | 640 | MobiDBLite | consensus disorder prediction | 603 | 626 | - | - | |
Cre02g2214 | 640 | FunFam | probable serine/threonine-protein kinase WNK9 | 116 | 296 | - | - | |
Cre02g2214 | 640 | MobiDBLite | consensus disorder prediction | 603 | 622 | - | - | |
Cre02g2214 | 640 | CDD | STKc_WNK | 31 | 291 | - | - | |
Cre02g2214 | 640 | PANTHER | SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED | 19 | 595 | IPR050588 | GO:0004674(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)|GO:0035556(PANTHER) | |
Cre02g2214 | 640 | SMART | serkin_6 | 33 | 291 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre02g2214 | 640 | Pfam | Protein kinase domain | 36 | 290 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre02g2214 | 640 | FunFam | Probable serine/threonine-protein kinase WNK1 | 17 | 114 | - | - | |
Cre02g2214 | 640 | ProSiteProfiles | Protein kinase domain profile. | 33 | 291 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre02g2214 | 640 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Cre02g2214 | 640 | SUPERFAMILY | Protein kinase-like (PK-like) | 35 | 292 | IPR011009 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre02g2214 | Cre-Chr2:35826417 | Cre06g1368 | Cre-Chr6:7881587 | 4.20E-134 | dispersed | |
Cre04g0742 | Cre-Chr4:25670752 | Cre02g2214 | Cre-Chr2:35826417 | 4.60E-159 | transposed | |
Cre11g2082 | Cre-Chr11:32599665 | Cre02g2214 | Cre-Chr2:35826417 | 2.50E-14 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
63894 | PF00069 | Pkinase | 9.90E-46 | CL0016 | Cre | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre02g2214 | K08867 | - | csv:101203757 | 1163.67 |