Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre02g2217 ATGGAGAATAAGGCAAGTGTGATGGTTCAACGATATGAATTAGGGAGATTGCTTGGCCAAGGAACCTTCGCAAAGGTATATTATGCAAGGAATACAGGAAACAATCAAAGTGTGGCCATTAAGGTGATTGATAAAGAAAAGATTACGAAGGCTTCGCTAATCGATCAGATTAAGCGTGAAATATCGATTATGAGACTAGTTAGACATCCTAATATTCTACGTCTATATGAGGTTATGGCCACCAAGACTAAGATCTACTTTGTTTTGGAATATGCTAAAGGTGGTGAGCTCTTTGACAAAGTTGCTAAAGGGAGGCTGCAGGAGGACATTGCTTGGAAATACTTTTATCAGTTAATCAATGCTGTTGATTTTTGTCACAGCAGGGGAGTGTATCACCGTGATATAAAGCCGGAGAACCTACTGCTTGATGAAAATGAGAATCTTAAGGTGTCTGATTTTGGTTTAAGTGCTTTAGCTGAGTCCAAGCGTCAAGACGGGTTGCTTCACACGACTTGTGGTACACCAGCTTATGTTGCCCCTGAAGTCATCAATAGGAAGGGCTATGATGGTGCAAAAGCTGATATCTGGTCTTGTGGAGTAGTTTTGTTTGTCCTATTGGCAGGTTATCTCCCATTCCACAATTCAAATTTGATGGAGATGTATCGGAAGATTGGAAAAGCAGAGTATAAATGCCCTAGTTGGTTCCCTCGTGAAGTGCGGCGGTTGCTAAGCAGGATGCTTGATCCAGACCCCATTGCTAGGACTTCAATAGCAATGATAAGACAAAGTTCTTGGTTCAAAAAGGGATTGAGGTCTAAGAATCTAAGAAGTGGAATAGAAAGTAATGCTGTAGCGTCTGAAGATGCAGCAGCTGTTTCTGGACCGTCCGAGAGAAGTGTGACAGCAGAAGGAAATCAAGAGCCAGATAGACCTCCAACTTTGAATGCTTTCGATATCATCTCCCTTTCCGCAGGGTTCAATTTATCCAGTTTATTTGAAGACAATTCAAAGAAGAAAGAAACATTGTTTACTTGTAGAAAACCAGCCTCTGTTATTCTCTCAAAACTAGAAGAAATGGCTAAACTTCTTCGGTTTCGAGTACAGAAGAAAGAAGCAGGCCTATTGAAATTTGAGGCACTAACAGAGGGAAGAAAGGGGGTATTATCCATTGATACAGAGATCTTCGAGGTTACTCCATCTTTTTATTTGGTGGAAATGAAAAAATCAAACGGAGACACATTGGAATATCAGAAAATATTGAAAGAGGACATAAGGCCAGCTCTACAGGATATTGTATGGGTTTGGCGAGGAGAGCAGGAGCAGCAGCAACAAAATCCTCAGCCTCAGCCTCTTCAACTGCAGGATCGGGTTCGAGATCCTTATACAGAGCAAGAGGGTGCGTCACAACCGCAGTAG 1416 41.81 MENKASVMVQRYELGRLLGQGTFAKVYYARNTGNNQSVAIKVIDKEKITKASLIDQIKREISIMRLVRHPNILRLYEVMATKTKIYFVLEYAKGGELFDKVAKGRLQEDIAWKYFYQLINAVDFCHSRGVYHRDIKPENLLLDENENLKVSDFGLSALAESKRQDGLLHTTCGTPAYVAPEVINRKGYDGAKADIWSCGVVLFVLLAGYLPFHNSNLMEMYRKIGKAEYKCPSWFPREVRRLLSRMLDPDPIARTSIAMIRQSSWFKKGLRSKNLRSGIESNAVASEDAAAVSGPSERSVTAEGNQEPDRPPTLNAFDIISLSAGFNLSSLFEDNSKKKETLFTCRKPASVILSKLEEMAKLLRFRVQKKEAGLLKFEALTEGRKGVLSIDTEIFEVTPSFYLVEMKKSNGDTLEYQKILKEDIRPALQDIVWVWRGEQEQQQQNPQPQPLQLQDRVRDPYTEQEGASQPQ 471
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 35851185 35852600 - CrPI670011_02g022170.1 Cre02g2217 491498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre02g2217 471 CDD CIPK_C 315 429 - -
Cre02g2217 471 Pfam NAF domain 311 369 IPR004041 GO:0007165(InterPro)
Cre02g2217 471 SUPERFAMILY Protein kinase-like (PK-like) 9 267 IPR011009 -
Cre02g2217 471 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre02g2217 471 SMART serkin_6 12 266 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre02g2217 471 MobiDBLite consensus disorder prediction 439 471 - -
Cre02g2217 471 MobiDBLite consensus disorder prediction 286 310 - -
Cre02g2217 471 FunFam Non-specific serine/threonine protein kinase 3 91 - -
Cre02g2217 471 Gene3D Transferase(Phosphotransferase) domain 1 2 308 - -
Cre02g2217 471 ProSiteProfiles NAF domain profile. 309 333 IPR018451 GO:0007165(InterPro)
Cre02g2217 471 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre02g2217 471 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 4 422 - GO:0004674(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER)
Cre02g2217 471 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524(InterPro)
Cre02g2217 471 FunFam Non-specific serine/threonine protein kinase 309 433 - -
Cre02g2217 471 FunFam Non-specific serine/threonine protein kinase 5 309 - -
Cre02g2217 471 CDD STKc_SnRK3 11 265 - -
Cre02g2217 471 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre02g2217 471 Gene3D Kinase associated domain 1, KA1 309 434 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g2217 Cre-Chr2:35851185 Cre04g0748 Cre-Chr4:25902013 6.80E-174 dispersed
Cre02g2216 Cre-Chr2:35847160 Cre02g2217 Cre-Chr2:35851185 9.60E-111 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63896 PF00069 Pkinase 1.00E-74 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre02g2217 - - - 0.0