Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre02g2221 ATGGCGATTACCATTGTTTCTTCTCATAACAAAATAGCAATGACATTCGCATTAGCTTTATTGGCAATATTCATGGAGAGCTCCTCAGCTCAGTTGTCCCCCAACTTCTACTACAAGAGTTGTCCTAAGCTCCTTGGTATAGTTCGAGCTGGTGTTCGATCTGCCGTTGCTAAGGAAGCTCGCATGGGCGCTTCTCTTCTCCGGCTCCACTTTCACGATTGCTTCGTTAACGGTTGCGATGGATCCATCCTTCTAGATGATACTCCTACATTTATAGGAGAGCAAACTGCAGCTCCTAACAATAGATCTGTTAGAGGGTTCAACGTGATTGAGAGTATAAAGAAAAATATAGAAAAAATTTGTCCTGGCGTTGTCTCTTGTGCTGATATTTTGACTCTTTCTGCTCGCGACTCCGTTGTAGCATTGGGAGGGCCAAGTTGGAAAGTGAAATTGGGAAGAAGAGATTCCAAAACAGCCAGTTTCTCTGATGTCATTGGTGCTATTCCTCCGCCAACCTCCACTCTTGCCACCCTCATCAATCGATTCAATACCAAAGGCCTTTCCCGAAAGGATTTGGTTGTTTTATCTGGGGCTCATACAATTGGGAAAGCAAGGTGTTTGTTTTTCAAGAACCGCATTTATAATGAAACCAACATCGACAAGTCGTTCGCTAAGGAGAGGCAAAGGAACTGCCCAAAGAATGGAGGAGATGACAATCTTGCGCCTTTGGACTTTAGAACCCCAAAGCTTTTTGACAACTATTACTACAAGAACCTTTTGGAGAAAAAGGCTTTGCTCCGCTCCGATCAGGTGCTACACGATGGCGGATCCACTGATTCTTTGGTTGAACTCTACAGTCACGACAATGCTGCCTTTGAATCTGACTTCGTGACAGCTATGATCAAGATGGGTGACATTCAGCCGCTCACTGGATCGCGAGGCGAGATCCGAAAACTTGGAGGCCCAAGTTGGAAGGTAAAATTAGGAAGAAGAGATTCTAAAACAGCTAGCTTCTCCGATGTCACTGGTGCTATTCCCCCGCCAACCTCGACCCTCAACACCCTTATCAACCGATTCAACACCAAAGGCCTCTCCCCTCGAGACTTGGTTGCCTTATCTGGGGCTCACACAATTGGGCAAGCAAGATGTTTGTTTTTCAAGAATCGTATATATAACGAGAGTAACATCGACAAGTCGTTCGCTGAGGAGAGACAAAGGAACTGCCCAACCATTGGAGGAGATGACAATCGTGCTCCTTTGGACATTAGAACCCCAAAGCTTTTTGACAACTACTATTACAAGAACCTCTTGGAGAAGAAGGCTTTGCTCCGCTCTGATCAGGTGCTCCACAATGGCGGATCCACCGATTCCTTGGTTGAACTCTATAGTGACAATAGTGATGCATTTGAGTTTGACTTTGTGGTGGCTATGATCAAGATGGGTGACATTCAGCTGCTCACTGGATCACAGGATGAGATTCGTAAGATTTGCAGCCAACCCAACTAA 1506 45.42 MAITIVSSHNKIAMTFALALLAIFMESSSAQLSPNFYYKSCPKLLGIVRAGVRSAVAKEARMGASLLRLHFHDCFVNGCDGSILLDDTPTFIGEQTAAPNNRSVRGFNVIESIKKNIEKICPGVVSCADILTLSARDSVVALGGPSWKVKLGRRDSKTASFSDVIGAIPPPTSTLATLINRFNTKGLSRKDLVVLSGAHTIGKARCLFFKNRIYNETNIDKSFAKERQRNCPKNGGDDNLAPLDFRTPKLFDNYYYKNLLEKKALLRSDQVLHDGGSTDSLVELYSHDNAAFESDFVTAMIKMGDIQPLTGSRGEIRKLGGPSWKVKLGRRDSKTASFSDVTGAIPPPTSTLNTLINRFNTKGLSPRDLVALSGAHTIGQARCLFFKNRIYNESNIDKSFAEERQRNCPTIGGDDNRAPLDIRTPKLFDNYYYKNLLEKKALLRSDQVLHNGGSTDSLVELYSDNSDAFEFDFVVAMIKMGDIQLLTGSQDEIRKICSQPN 501
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 35867947 35872146 - CrPI670011_02g022210.1 Cre02g2221 491502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre02g2221 501 ProSitePatterns Peroxidases proximal heme-ligand signature. 191 201 IPR019793 -
Cre02g2221 501 SUPERFAMILY Heme-dependent peroxidases 319 501 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2221 501 ProSiteProfiles Plant heme peroxidase family profile. 320 501 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2221 501 FunFam Peroxidase 346 480 - -
Cre02g2221 501 FunFam Peroxidase 35 176 - -
Cre02g2221 501 FunFam Peroxidase 169 303 - -
Cre02g2221 501 ProSitePatterns Peroxidases active site signature. 63 74 IPR019794 GO:0004601(InterPro)
Cre02g2221 501 Gene3D Peroxidase, domain 2 169 303 - -
Cre02g2221 501 Gene3D Peroxidase, domain 2 346 480 - -
Cre02g2221 501 PRINTS Plant peroxidase signature 65 85 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2221 501 PRINTS Plant peroxidase signature 41 60 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2221 501 PRINTS Plant peroxidase signature 143 158 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2221 501 PRINTS Plant peroxidase signature 190 202 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2221 501 PRINTS Plant peroxidase signature 124 134 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2221 501 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2221 501 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2221 501 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2221 501 PRINTS Plant peroxidase signature 105 118 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2221 501 PRINTS Haem peroxidase superfamily signature 421 436 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2221 501 PRINTS Haem peroxidase superfamily signature 63 77 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2221 501 PRINTS Haem peroxidase superfamily signature 125 142 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2221 501 PRINTS Haem peroxidase superfamily signature 143 155 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2221 501 PRINTS Haem peroxidase superfamily signature 191 206 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2221 501 ProSiteProfiles Plant heme peroxidase family profile. 31 318 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2221 501 ProSitePatterns Peroxidases proximal heme-ligand signature. 368 378 IPR019793 -
Cre02g2221 501 PANTHER PEROXIDASE 72-RELATED 20 318 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2221 501 CDD secretory_peroxidase 31 318 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cre02g2221 501 SUPERFAMILY Heme-dependent peroxidases 31 318 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2221 501 Pfam Peroxidase 312 465 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2221 501 Pfam Peroxidase 48 287 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2221 501 Gene3D - 35 318 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g2221 Cre-Chr2:35867947 Cre11g1063 Cre-Chr11:8063455 9.00E-108 dispersed
Cre02g2220 Cre-Chr2:35861048 Cre02g2221 Cre-Chr2:35867947 8.40E-131 tandem
Cre02g2221 Cre-Chr2:35867947 Cre02g2222 Cre-Chr2:35875246 5.40E-153 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre02g2221 K00430 - csv:101208108 555.058