Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre02g2222 ATGATTGTAGCTTTAGCAATAACTTTATTGGCGGTGTTCATTGGGAGCTCTTCAGCTCAGCTCTCTCCCAACTTCTACTACGATAGTTGCCCCAAGTTGCTCAGTACCGTTAAAGCCGGTATCCATTCCGCCGTCGCTCAAGAAGCTCGCATGGGTGCTTCCCTCCTTCGCCTTCACTTTCACGATTGTTTCGTTAACGGTTGTGATGGATCAATTCTTCTAGAAGATACTCCTACGTTTACAGGAGAGCAAACAGCAGCTCCCAACAACAACTCTGTTAGAGGGTTCAATGTGATTGAGAGCATAAAGAAAAATGTTGAAAAAATTTGCCCTGGCATCGTCTCTTGTGCTGATATTTTAACTCTTTCAGCTCGTGACTCTGTTGTAGTGCTTGGAGGGCCAAGTTGGGAGGTGAAGTTGGGAAGAAGAGATTCTAAAACAGCTAGCTTCTCCGACGTCACAGGTGCTATTCCTCCACCAACCTCTAACCTCGACACTCTCATCAATCGATTCAACTCCAAAGGCCTCTCCCCTCGAGACTTGGTTGCCTTATCTGGGGCCCACACAATCGGGCAAGCAAAGTGTTTGTTTTTCAAGAACCGTATATATAACGAGACCAACATTGACGAGTCGTTTGCTGAGGAGAGACAAAGAAATTGCCCAACAAATGGAGGTGACGAAAATCGTGCTCCTTTGGACTTTAGAACCCCAAAGCTTTTCGACAACTACTACTACAAGAACCTCTTGGAGAAGAAGGCTTTGCTCCGCTCCGATCAGGTGCTCCACGATGGTGGATCCACCGATTCCTTGGTTGAACTCTATGGTGATGACAGTGATGCCTTTGAATCTGACTTCGTGGCAGCTATGATCAAGATGGGCGACATTGAGCCGCTCACTGGATCACAAGGTGAAATTCGCAAGATTTGCAGCCGACCCAACTAA 942 46.82 MIVALAITLLAVFIGSSSAQLSPNFYYDSCPKLLSTVKAGIHSAVAQEARMGASLLRLHFHDCFVNGCDGSILLEDTPTFTGEQTAAPNNNSVRGFNVIESIKKNVEKICPGIVSCADILTLSARDSVVVLGGPSWEVKLGRRDSKTASFSDVTGAIPPPTSNLDTLINRFNSKGLSPRDLVALSGAHTIGQAKCLFFKNRIYNETNIDESFAEERQRNCPTNGGDENRAPLDFRTPKLFDNYYYKNLLEKKALLRSDQVLHDGGSTDSLVELYGDDSDAFESDFVAAMIKMGDIEPLTGSQGEIRKICSRPN 313
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 35875246 35876536 - CrPI670011_02g022220.1 Cre02g2222 491503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre02g2222 313 PRINTS Haem peroxidase superfamily signature 180 195 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2222 313 PRINTS Haem peroxidase superfamily signature 233 248 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2222 313 PRINTS Haem peroxidase superfamily signature 52 66 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2222 313 PRINTS Haem peroxidase superfamily signature 132 144 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2222 313 PRINTS Haem peroxidase superfamily signature 114 131 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2222 313 Pfam Peroxidase 37 276 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2222 313 PRINTS Plant peroxidase signature 287 300 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2222 313 PRINTS Plant peroxidase signature 132 147 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2222 313 PRINTS Plant peroxidase signature 247 264 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2222 313 PRINTS Plant peroxidase signature 54 74 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2222 313 PRINTS Plant peroxidase signature 179 191 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2222 313 PRINTS Plant peroxidase signature 113 123 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2222 313 PRINTS Plant peroxidase signature 231 246 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2222 313 PRINTS Plant peroxidase signature 94 107 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2222 313 PRINTS Plant peroxidase signature 30 49 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2222 313 ProSitePatterns Peroxidases active site signature. 52 63 IPR019794 GO:0004601(InterPro)
Cre02g2222 313 Gene3D Peroxidase, domain 2 158 292 - -
Cre02g2222 313 ProSitePatterns Peroxidases proximal heme-ligand signature. 180 190 IPR019793 -
Cre02g2222 313 Gene3D - 24 310 - -
Cre02g2222 313 FunFam Peroxidase 158 292 - -
Cre02g2222 313 CDD secretory_peroxidase 20 311 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cre02g2222 313 ProSiteProfiles Plant heme peroxidase family profile. 20 313 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2222 313 PANTHER PEROXIDASE 72-RELATED 10 311 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2222 313 SUPERFAMILY Heme-dependent peroxidases 20 313 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2222 313 FunFam Peroxidase 24 166 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g2220 Cre-Chr2:35861048 Cre02g2222 Cre-Chr2:35875246 2.10E-129 dispersed
Cre02g2222 Cre-Chr2:35875246 Cre11g1063 Cre-Chr11:8063455 4.60E-110 dispersed
Cre02g2221 Cre-Chr2:35867947 Cre02g2222 Cre-Chr2:35875246 5.40E-153 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre02g2222 K00430 - csv:101204245 582.408