Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre02g2271 ATGCCGGCCATTACTCGAGCAAATCACTGTAAGATCGAGAGTGGAACGAATTTTAACGATGTTACGGTTGCGAGGATGACTGATGGAGGTTCTGTAATGGAAACCACTCCTCCGAAGCGGAAACTGAGATCCAGTGATGTGCAGAGGCAACAAAGCCCTAACTCTGCGCCGGTGAATTGGAAATCGCCTCGTCGGCGCCTTAATTCGAGTCCAAAATGCCCTCCACAGAGCGATGGGAAAACGTTTAACGATGGCTTTTCTAACTTACATAGTTCCCCGATAAGATGCTTGTTGAAGGACCTTATTGTCAAACCAGATTGGAATCCTAAAGATACTGAACATATAAAAACAGCAAAGGAAGCATTGCATGTATCGACAGCTCCAACTACAATCATGTGCCGTGAAGATGAACAAAGTAAAATCTTCAATTTCTGCAAGGCTTGTGTGGAGCAAGAAAAAGCTGGTAGTTTGTATGTTTGCGGGTGTCCAGGAACTGGCAAATCCTTGTCCATGGAAAAAGTGAAAGAGCAGTTGGCTGCTTGGGTGAAAGAGTCAGGTCTTCAGCTTCCAGACATCTTGTCCATAAACTGCACTTCCTTAGCTAACACATCCGATATTTTCATTAAGATGATGGGTGAAGCCCAACCACAAAAGAAAAGGAATGGCTCTTTAACACCCTTGCAACATCTTCAACGCTTGTACTCCCAAAAGGCAGAGTCATCTTGCATGAAGATGATGTTGATAATAGCTGATGAATTGGATTATTTAATTACAAAGGATAAAGCAGTGCTACATGATCTGTTCATGCTCACAACTTTCCCATTTTCAAGATGTATTTTGATAGGAATTGCAAATGCTATTGACTTAGCAGATCGCTTTCTTCCAAGACTTCAGGCTTTGAATTGCAAACCTCAGGTCGTAACTTATAGGGCATATTCCAAGGAACAGATCCTCAAGATTCTTCAACAAAGGTTAATTGTGCTTCCTTTCATTGTCTTTCAGTCGCAAGCACTGGAGCTTTGTGCTAGAAAAGTTGCAGCTGTCTCTGGAGATATGAGAAAAGCTCTCTGTGTTTGCAGGAATGCCATTGAATTGTTGGAGGTGGAACTCAAAGCATCCTCTAAGGAGCTGAACCATAATGACGCATGTGATGCTTCAGCACCGCCTGAGCTTGTCAAAAGACAAGAGTCTCAGATTGTGAGGTTGGACCATATGGCTGTTGCCTTATCCAAGACTTTTAAATCACCAGCAGTAGAAACCATACAATCTCTTCCTCAGCATCAACAGATAATTTTATGCTCTGTTGTGAAACTTGTTCGTGGAGGAAAGAAGGATACAACTATAGGAGAGCTAAACAAATCATACGTAGAGATATGTAAATCAACACTAATCCCACCGGTGGGGAGTTTGGAACTTACAAATATGTTCACAGTGTTAAACGACCAGGGGCTTCTCAAACTTGGGCAATCTCGAGATGATAAGATGAGGCGAGTGTTGTTGAAAGTTGATGAAGCTGATGTCATGTTCGCATTACAGGGAATACGCTTCTTTCGAAATTGCCTACAGTAA 1569 42.38 MPAITRANHCKIESGTNFNDVTVARMTDGGSVMETTPPKRKLRSSDVQRQQSPNSAPVNWKSPRRRLNSSPKCPPQSDGKTFNDGFSNLHSSPIRCLLKDLIVKPDWNPKDTEHIKTAKEALHVSTAPTTIMCREDEQSKIFNFCKACVEQEKAGSLYVCGCPGTGKSLSMEKVKEQLAAWVKESGLQLPDILSINCTSLANTSDIFIKMMGEAQPQKKRNGSLTPLQHLQRLYSQKAESSCMKMMLIIADELDYLITKDKAVLHDLFMLTTFPFSRCILIGIANAIDLADRFLPRLQALNCKPQVVTYRAYSKEQILKILQQRLIVLPFIVFQSQALELCARKVAAVSGDMRKALCVCRNAIELLEVELKASSKELNHNDACDASAPPELVKRQESQIVRLDHMAVALSKTFKSPAVETIQSLPQHQQIILCSVVKLVRGGKKDTTIGELNKSYVEICKSTLIPPVGSLELTNMFTVLNDQGLLKLGQSRDDKMRRVLLKVDEADVMFALQGIRFFRNCLQ 522
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 36301411 36305366 - CrPI670011_02g022710.1 Cre02g2271 491552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre02g2271 522 PIRSF Cdc6 11 522 IPR016314 GO:0006270(InterPro)|GO:0051301(InterPro)
Cre02g2271 522 CDD AAA 149 297 - -
Cre02g2271 522 MobiDBLite consensus disorder prediction 28 84 - -
Cre02g2271 522 Pfam CDC6, C terminal winged helix domain 419 510 IPR015163 -
Cre02g2271 522 Gene3D - 420 511 IPR036388 -
Cre02g2271 522 Gene3D - 111 302 IPR027417 -
Cre02g2271 522 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 38 517 IPR050311 GO:0003688(PANTHER)|GO:0005634(PANTHER)|GO:0033314(PANTHER)
Cre02g2271 522 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 119 369 IPR027417 -
Cre02g2271 522 Gene3D - 303 419 - -
Cre02g2271 522 Pfam AAA domain 153 273 IPR049945 GO:0016887(InterPro)
Cre02g2271 522 SMART AAA_5 153 303 IPR003593 GO:0016887(InterPro)
Cre02g2271 522 Pfam Cdc6/ORC-like, ATPase lid domain 312 369 IPR054425 -
Cre02g2271 522 MobiDBLite consensus disorder prediction 47 84 - -
Cre02g2271 522 CDD Cdc6_C 425 507 IPR015163 -
Cre02g2271 522 FunFam Cell division control protein 112 300 - -
Cre02g2271 522 SMART Cdc6_C_2 432 511 IPR015163 -
Cre02g2271 522 SUPERFAMILY Winged helix DNA-binding domain 418 520 IPR036390 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g2271 Cre-Chr2:36301411 Cre08g0009 Cre-Chr8:300402 1.80E-26 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre02g2271 K02213 - csv:101205741 879.396