Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre02g2273 ATGGCGCCAATTCCCAGATCTTTCTCCCACAAATTCTTCTTCCTTTTACTCCTCATTCTCCACGTTGGCTGCTTCCTTCTTACCACCGCCGACCACCGTCGCCGCCGCCACCACCGTCCTACTCCCTCCTGTTTGAAGCCACACAAACTCAAATCCCTAGCTTCCTCTTTTTCATTTCTCAAACGAATCTTCTCTTCCAAGACTTGCAAAATGGCAATCGAAACCGCTCGCTCGCCTTCCACTCCCGCTAGGTCATCGCAGCACTCCATCGTCACGCTCATCCAACAGGAGATTCCTCCTCCGCCGATTCCGGAGACTCATCCTCCAACCGGAACGCCGCAGGATTCAGATATCACTACGGCAGAGCCGAATCAATCTTTTCCTCTTCGAAACGATATCTTCCCCTGTACTGCTTGTGGCGAGATTTTTCCCAAAGCGCAACTCCTCGAACAGCATCAATCGATTAAACACGCTGTGTCAGAGCTTGCTGATTCGGATTCTGGAAAGAATATTGTTCGGATTATTTTCGAAACTGGATGGACGAGTAGAGAAAAAAGCCCTAAAATCCTTCGAATCTTGAAAATCCACAATAGTCAGAAGATTCTTTCCAGATTTGAAGAGTATAGAGAGACGGTGAAGGCGAAAGCGGCTATACACGGCGGCGTAAAGCGGCGGGATGAGCGGTGCATTGCCGACGGGAACGAGCTTCTGAGGTTTCATTGTTCGACGTTTTTGTGCGATTTGGGGCAAAATGGTAATTCCAGTCTTTGCGGGCAGCAATTTTGTAGTATTTGTGGGATAATTAAATCGGGATTCTCACACAAGTTGGATGGAATTTCGACGCTATCGAGTAGCTGGAGGGCACACGTGGCGATCCCTGAGGACATCGAAGAGGAGTTCAAGTTTCTGAATGCGAAGCGGGCGATTTTGGTTTGTCGGGTTGTGGCGGGTCGGGTCGGCTCAGACGCCGATGAGCCGGAAAAAGACGGCGGAGGGTTTGACTCCGTCGTTGGGAGGAGTGGGAGTGGGGCCCAGACCACGTTGGATGAAGAAGAGCTGTTGGTTTTCAATCCGAGGGCTGTGCTCCCCTGCTTCGCGATTGTATACGAAATCTAA 1116 50.45 MAPIPRSFSHKFFFLLLLILHVGCFLLTTADHRRRRHHRPTPSCLKPHKLKSLASSFSFLKRIFSSKTCKMAIETARSPSTPARSSQHSIVTLIQQEIPPPPIPETHPPTGTPQDSDITTAEPNQSFPLRNDIFPCTACGEIFPKAQLLEQHQSIKHAVSELADSDSGKNIVRIIFETGWTSREKSPKILRILKIHNSQKILSRFEEYRETVKAKAAIHGGVKRRDERCIADGNELLRFHCSTFLCDLGQNGNSSLCGQQFCSICGIIKSGFSHKLDGISTLSSSWRAHVAIPEDIEEEFKFLNAKRAILVCRVVAGRVGSDADEPEKDGGGFDSVVGRSGSGAQTTLDEEELLVFNPRAVLPCFAIVYEI 371
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 36324571 36325686 - CrPI670011_02g022730.1 Cre02g2273 491554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre02g2273 371 MobiDBLite consensus disorder prediction 110 124 - -
Cre02g2273 371 SUPERFAMILY ADP-ribosylation 160 370 - -
Cre02g2273 371 ProSitePatterns Zinc finger C2H2 type domain signature. 136 157 IPR013087 -
Cre02g2273 371 Gene3D - 158 370 - -
Cre02g2273 371 MobiDBLite consensus disorder prediction 98 124 - -
Cre02g2273 371 ProSiteProfiles Zinc finger C2H2 type domain profile. 134 162 IPR013087 -
Cre02g2273 371 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 58 369 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g2273 Cre-Chr2:36324571 Cre03g1235 Cre-Chr3:13960451 1.40E-52 dispersed
Cre02g2273 Cre-Chr2:36324571 Cre10g0827 Cre-Chr10:8926570 1.50E-46 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
53225 None None None None Cre TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre02g2273 - - - 0.0